diff options
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/rebase/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/rebase/files/digest-rebase-607 | 3 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-607.ebuild | 43 |
3 files changed, 52 insertions, 1 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index 5ea9610c1f40..3967977e7bb6 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/rebase # Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.66 2006/06/26 15:47:49 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.67 2006/07/12 01:22:20 ribosome Exp $ + +*rebase-607 (12 Jul 2006) + + 12 Jul 2006; Olivier Fisette <ribosome@gentoo.org> +rebase-607.ebuild: + New ustream version. *rebase-606 (26 Jun 2006) diff --git a/sci-biology/rebase/files/digest-rebase-607 b/sci-biology/rebase/files/digest-rebase-607 new file mode 100644 index 000000000000..8e5d183629dd --- /dev/null +++ b/sci-biology/rebase/files/digest-rebase-607 @@ -0,0 +1,3 @@ +MD5 cca19d19fdea3cacf1474c599729ea16 rebase-607.tar.bz2 183819 +RMD160 5c759b198c25e279d628897129e28b32081f9dbd rebase-607.tar.bz2 183819 +SHA256 84f8a44535f566629f2d4ce3af92bb369e51a42550a923e732d1efa54e1f4f67 rebase-607.tar.bz2 183819 diff --git a/sci-biology/rebase/rebase-607.ebuild b/sci-biology/rebase/rebase-607.ebuild new file mode 100644 index 000000000000..53b6c927178d --- /dev/null +++ b/sci-biology/rebase/rebase-607.ebuild @@ -0,0 +1,43 @@ +# Copyright 1999-2006 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-607.ebuild,v 1.1 2006/07/12 01:22:20 ribosome Exp $ + +DESCRIPTION="A restriction enzyme database" +LICENSE="public-domain" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="mirror://gentoo/${P}.tar.bz2" + +SLOT="0" +# Minimal build keeps only the indexed files (if applicable) and the +# documentation. The non-indexed database is not installed. +IUSE="emboss minimal" +KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64" + +DEPEND="emboss? ( >=sci-biology/emboss-3.0.0-r1 )" + +src_compile() { + if use emboss; then + echo + einfo "Indexing ${PN} for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \ + -protofile proto.${PV} || die "Indexing ${PN} failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${PV} proto.${PV} || die \ + "Failed to install raw database." + fi + newdoc REBASE.DOC README || die "Failed to install documentation." + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/{embossre.enz,embossre.ref,embossre.sup} || die \ + "Failed to install EMBOSS data files." + insinto /usr/share/EMBOSS/data + doins embossre.equ || die "Failed to install enzyme prototypes file." + fi +} |