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* whitespaceMichael Sterrett2006-01-091-4/+4
| | | | | (Portage version: 2.0.53) (Unsigned Manifest commit)
* whitespaceMichael Sterrett2006-01-091-2/+2
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* Manual Manifest commit.Sven Wegener2005-12-241-1/+10
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* removed from package.mask and marked ~x86. Added app-shells/tcsh as ↵Markus Dittrich2005-12-221-2/+3
| | | | | | | alternative to app-shells/csh in DEPEND. (Portage version: 2.1_pre1) (Unsigned Manifest commit)
* removed from package.mask and marked ~x86. Added app-shells/tcsh as ↵Markus Dittrich2005-12-223-8/+13
| | | | | | alternative to app-shells/csh in DEPEND. (Portage version: 2.1_pre1)
* An application for processing and curation of macromolecular structure data.Donnie Berkholz2005-12-201-1/+3
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* An application for processing and curation of macromolecular structure data.Donnie Berkholz2005-12-208-0/+417
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* Add a fixed version; works with other RCSB apps and libraries.Donnie Berkholz2005-12-201-4/+3
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* Add a fixed version; works with other RCSB apps and libraries.Donnie Berkholz2005-12-2010-360/+401
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* Extract lots of information from Protein Data Bank files.Donnie Berkholz2005-12-201-2/+3
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* Extract lots of information from Protein Data Bank files.Donnie Berkholz2005-12-206-0/+291
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* New package providing rapid, accurate and fully automated calculation of ↵Donnie Berkholz2005-12-201-4/+3
| | | | | | | pathways leading from buried cavities to outside solvent in static and dynamic protein structures. Also has a neat PyMol plugin. (Portage version: 2.1_pre1) (Unsigned Manifest commit)
* New package providing rapid, accurate and fully automated calculation of ↵Donnie Berkholz2005-12-205-0/+77
| | | | | | pathways leading from buried cavities to outside solvent in static and dynamic protein structures. Also has a neat PyMol plugin. (Portage version: 2.1_pre1)
* virtual/glut, not media-libs/glut.Donnie Berkholz2005-12-191-8/+8
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* virtual/glut, not media-libs/glut.Donnie Berkholz2005-12-192-3/+6
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* Remove commented-out sections.Donnie Berkholz2005-12-191-2/+2
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* Remove commented-out sections.Donnie Berkholz2005-12-192-13/+6
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* Add a set of tools used by the PDB for processing and checking structure data.Donnie Berkholz2005-12-191-1/+3
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* Add a set of tools used by the PDB for processing and checking structure data.Donnie Berkholz2005-12-196-0/+389
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* Prefer RESTRICT=mirror over nomirror, as portage code does.Donnie Berkholz2005-12-181-2/+2
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* Prefer RESTRICT=mirror over nomirror, as portage code does.Donnie Berkholz2005-12-182-3/+6
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* We can't mirror this.Donnie Berkholz2005-12-181-2/+2
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* We can't mirror this.Donnie Berkholz2005-12-182-2/+6
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* A new graphical NMR assignment and integration program for proteins, nucleic ↵Donnie Berkholz2005-12-181-4/+3
| | | | | | | acids, and other polymers. Very strange build system; takes lots of hacking and tweaking to get working. Doesn't work with python-2.4, only 2.3. (Portage version: 2.0.53) (Unsigned Manifest commit)
* A new graphical NMR assignment and integration program for proteins, nucleic ↵Donnie Berkholz2005-12-186-0/+372
| | | | | | acids, and other polymers. Very strange build system; takes lots of hacking and tweaking to get working. Doesn't work with python-2.4, only 2.3. (Portage version: 2.0.53)
* New electrostatic potential package: Macroscopic Electrostatics with Atomic ↵Donnie Berkholz2005-12-171-2/+3
| | | | | | | Detail. (Portage version: 2.0.53) (Unsigned Manifest commit)
* New electrostatic potential package: Macroscopic Electrostatics with Atomic ↵Donnie Berkholz2005-12-176-0/+127
| | | | | | Detail. (Portage version: 2.0.53)
* A crystallographic real-space electron-density refinement and optimization ↵Donnie Berkholz2005-12-161-2/+3
| | | | | | | program. (Portage version: 2.0.53) (Unsigned Manifest commit)
* A crystallographic real-space electron-density refinement and optimization ↵Donnie Berkholz2005-12-166-0/+133
| | | | | | program. (Portage version: 2.0.53)
* Thermal ellipsoid plot program for crystal structure illustrations.Donnie Berkholz2005-12-161-1/+3
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* Thermal ellipsoid plot program for crystal structure illustrations.Donnie Berkholz2005-12-165-0/+54
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* Another crystallography package. This one considers itself a versatile, ↵Donnie Berkholz2005-12-161-2/+3
| | | | | | | SHELX-97 compatible, multipurpose tool. (Portage version: 2.0.53) (Unsigned Manifest commit)
* Another crystallography package. This one considers itself a versatile, ↵Donnie Berkholz2005-12-165-0/+78
| | | | | | SHELX-97 compatible, multipurpose tool. (Portage version: 2.0.53)
* Fix SRC_URI.Donnie Berkholz2005-12-151-2/+2
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* Fix SRC_URI.Donnie Berkholz2005-12-152-4/+7
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* Fix license. The author informed me by email that it's intended to be freely ↵Donnie Berkholz2005-12-151-2/+2
| | | | | | | distributed, modified and redistributed. (Portage version: 2.0.53) (Unsigned Manifest commit)
* Fix license. The author informed me by email that it's intended to be freely ↵Donnie Berkholz2005-12-152-3/+7
| | | | | | distributed, modified and redistributed. (Portage version: 2.0.53)
* MAID does automatic fitting of protein X-ray crystallography electron ↵Donnie Berkholz2005-12-151-1/+3
| | | | | | | density maps. It can correctly build about 60% of alpha carbons on medium-resolution maps and about 80% on high-resolution maps. (Portage version: 2.0.53) (Unsigned Manifest commit)
* MAID does automatic fitting of protein X-ray crystallography electron ↵Donnie Berkholz2005-12-157-0/+1078
| | | | | | density maps. It can correctly build about 60% of alpha carbons on medium-resolution maps and about 80% on high-resolution maps. (Portage version: 2.0.53)
* Update rasmol script to fall back to xdpyinfo if xwininfo isn't available. ↵Donnie Berkholz2005-12-151-2/+4
| | | | | | | Depend on one of the two. (Portage version: 2.0.53) (Unsigned Manifest commit)
* Update rasmol script to fall back to xdpyinfo if xwininfo isn't available. ↵Donnie Berkholz2005-12-154-3/+87
| | | | | | Depend on one of the two. (Portage version: 2.0.53)
* (#115649) Add rman to modular X deps.Donnie Berkholz2005-12-151-2/+2
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* (#115649) Add rman to modular X deps.Donnie Berkholz2005-12-152-2/+7
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* Add modular X dependencies.Donnie Berkholz2005-12-151-3/+3
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* Add modular X dependencies.Donnie Berkholz2005-12-152-3/+18
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* marked apbs-0.3.2.ebuild as ~x86; changed maintainer to markusle@gentoo.orgMarkus Dittrich2005-12-131-2/+2
| | | | | (Portage version: 2.0.51.22-r3) (Unsigned Manifest commit)
* marked apbs-0.3.2.ebuild as ~x86; changed maintainer to markusle@gentoo.orgMarkus Dittrich2005-12-132-1/+8
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* Add modular X dependencies.Donnie Berkholz2005-12-121-3/+3
| | | | | (Portage version: 2.0.53) (Unsigned Manifest commit)
* Add modular X dependencies.Donnie Berkholz2005-12-122-3/+15
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* This revision has the TDHF code enabled, which should now work properly with ↵Markus Dittrich2005-12-071-2/+2
| | | | | | | the patched g77 (see bug #114367). (Portage version: 2.0.51.22-r3) (Unsigned Manifest commit)