# Copyright 1999-2010 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/mauve/mauve-9999.ebuild,v 1.2 2010/03/09 13:04:57 abcd Exp $ EAPI="2" ESVN_REPO_URI="https://mauve.svn.sourceforge.net/svnroot/mauve/mauve/trunk" WANT_ANT_TASKS="ant-nodeps" EANT_GENTOO_CLASSPATH="biojava,zeus-jscl,dbus-java" JAVA_ANT_REWRITE_CLASSPATH="true" JAVA_PKG_BSFIX_NAME="build.xml" inherit subversion java-pkg-2 java-ant-2 eutils DESCRIPTION="Multiple genome alignment with large-scale evolutionary events (GUI component)" HOMEPAGE="http://gel.ahabs.wisc.edu/mauve/" SRC_URI="" LICENSE="GPL-2" SLOT="0" IUSE="doc" KEYWORDS="" CDEPEND="~dev-java/biojava-1.6 >=dev-java/dbus-java-2.5.1 ~dev-java/zeus-jscl-1.08 dev-java/ant-nodeps" RDEPEND=">=virtual/jre-1.5 sci-biology/mauvealigner ${CDEPEND}" DEPEND=">=virtual/jdk-1.5 media-gfx/icoutils ${CDEPEND}" S="${WORKDIR}" java_prepare() { find -name '*.jar' -not -name 'jarbundler*' -print -delete perl -i -ne 'print unless /<dmg/ or /<taskdef.+name="dmg"/../<\/taskdef>/' build.xml perl -i -ne 'print unless /<ssh/../<\/ssh/ or /<taskdef.+name="ssh"/../<\/taskdef>/' build.xml perl -i -ne 'print unless /<retroweaver/ or /<taskdef.+name="retroweaver"/../<\/taskdef>/' build.xml } src_install() { java-pkg_dojar Mauve.jar java-pkg_dolauncher Mauve --main org.gel.mauve.gui.Mauve icotool -x win32/mauve.ico insinto /usr/share/pixmaps newins mauve_4_48x48x32.png Mauve.png make_desktop_entry Mauve Mauve Mauve }