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Diffstat (limited to 'sci-biology/hmmer/ChangeLog-2015')
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diff --git a/sci-biology/hmmer/ChangeLog-2015 b/sci-biology/hmmer/ChangeLog-2015 new file mode 100644 index 00000000..2e075ba3 --- /dev/null +++ b/sci-biology/hmmer/ChangeLog-2015 @@ -0,0 +1,162 @@ +# ChangeLog for sci-biology/hmmer +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.38 2015/01/29 21:21:18 mgorny Exp $ + + 29 Jan 2015; Michał Górny <mgorny@gentoo.org> hmmer-3.0.ebuild: + Switch to CPU_FLAGS_X86. + + 19 Oct 2014; Patrick Lauer <patrick@gentoo.org> hmmer-3.0.ebuild: + Fix header + + 28 Jun 2012; Justin Lecher <jlec@gentoo.org> hmmer-3.0.ebuild, + -files/hmmer-3.0-perl-5.16.patch: + Fix the patch, thanks xarthisius and bonsaikitten for help + + 28 Jun 2012; Justin Lecher <jlec@gentoo.org> files/hmmer-3.0-perl-5.16.patch: + Fix patch, screwed VCS tags, #423983 + + 25 Jun 2012; Justin Lecher <jlec@gentoo.org> hmmer-3.0.ebuild, + +files/hmmer-3.0-perl-5.16.patch, metadata.xml: + Fix for build with perl-5.16, #421799; handle static-libs + + 18 Jul 2010; Christian Faulhammer <fauli@gentoo.org> hmmer-3.0.ebuild: + stable x86, bug 328419 + + 18 Jul 2010; Kacper Kowalik <xarthisius@gentoo.org> hmmer-2.3.2-r1.ebuild, + hmmer-2.3.2-r2.ebuild, hmmer-3.0.ebuild, +files/hmmer-3.0-fix_tests.patch: + Fix tests that use gsl. Make repoman happy. + + 16 Jul 2010; Markos Chandras <hwoarang@gentoo.org> hmmer-3.0.ebuild: + Stable on amd64 wrt bug #328419 + +*hmmer-3.0 (28 Mar 2010) + + 28 Mar 2010; Andrey Kislyuk <weaver@gentoo.org> -hmmer-3.0_beta2.ebuild, + +hmmer-3.0.ebuild: + Version bump + + 01 Jan 2010; Christian Faulhammer <fauli@gentoo.org> + hmmer-3.0_beta2.ebuild: + Transfer Prefix keywords + +*hmmer-3.0_beta2 (30 Aug 2009) + + 30 Aug 2009; Andrey Kislyuk <weaver@gentoo.org> +hmmer-3.0_beta2.ebuild: + Bump and add parallel make workaround, bug 282813 + +*hmmer-3.0_beta1 (21 Jun 2009) + + 21 Jun 2009; Andrey Kislyuk <weaver@gentoo.org> -hmmer-3.0_alpha2.ebuild, + +hmmer-3.0_beta1.ebuild: + Version bump + +*hmmer-3.0_alpha2 (02 May 2009) + + 02 May 2009; Andrey Kislyuk <weaver@gentoo.org> +hmmer-3.0_alpha2.ebuild: + Version bump (pre-release) + + 06 Aug 2008; Ulrich Mueller <ulm@gentoo.org> metadata.xml: + Add USE flag description to metadata wrt GLEP 56. + + 07 Feb 2008; Fabian Groffen <grobian@gentoo.org> hmmer-2.3.2-r1.ebuild, + hmmer-2.3.2-r2.ebuild: + Dropped ppc-macos keyword, see you in prefix + + 02 Jan 2008; Raúl Porcel <armin76@gentoo.org> hmmer-2.3.2-r2.ebuild: + Re-add ~ia64 + + 13 Nov 2007; Raúl Porcel <armin76@gentoo.org> hmmer-2.3.2-r2.ebuild: + Add ~alpha + + 22 May 2007; Olivier Fisette <ribosome@gentoo.org> hmmer-2.3.2-r1.ebuild, + hmmer-2.3.2-r2.ebuild: + Updated home page. Stabilised bug-fix release on x86 and amd64. + + 22 Feb 2007; Markus Ullmann <jokey@gentoo.org> ChangeLog: + Redigest for Manifest2 + + 14 Sep 2006; Olivier Fisette <ribosome@gentoo.org> metadata.xml: + Stepping down from maintaining this package. + + 07 May 2006; Markus Rothe <corsair@gentoo.org> hmmer-2.3.2-r2.ebuild: + Stable on ppc64 + + 06 Apr 2006; Thomas Cort <tcort@gentoo.org> hmmer-2.3.2-r1.ebuild: + Added ~alpha keyword. + + 29 Mar 2006; Aron Griffis <agriffis@gentoo.org> hmmer-2.3.2-r1.ebuild: + Mark 2.3.2-r1 stable on ia64 + + 23 Feb 2006; Aron Griffis <agriffis@gentoo.org> hmmer-2.3.2-r1.ebuild: + Mark 2.3.2-r1 ~ia64 + + 24 Jan 2006; Markus Rothe <corsair@gentoo.org> hmmer-2.3.2-r2.ebuild: + Added ~ppc64; bug #119723 + + 21 Jan 2006; Olivier Fisette <ribosome@gentoo.org> + -files/Makefile-hmmer-2.2g.patch, -hmmer-2.3.2.ebuild: + Removed obsolete version. + +*hmmer-2.3.2-r2 (21 Jan 2006) + + 21 Jan 2006; Olivier Fisette <ribosome@gentoo.org> +hmmer-2.3.2-r2.ebuild: + Fixed compilation problem on ppc64 (see bug #119723). + + 04 Jan 2006; Olivier Fisette <ribosome@gentoo.org> hmmer-2.3.2-r1.ebuild: + Do not depend on "virtual/libc" (package not in system target). + + 19 Sep 2005; Olivier Fisette <ribosome@gentoo.org> metadata.xml: + Maintainer changed from Stephen Diener (MIA) to Olivier Fisette. + + 26 Aug 2005; Carlos Silva <r3pek@gentoo.org> hmmer-2.3.2-r1.ebuild: + Marked amd64 + + 21 May 2005; Jason Wever <weeve@gentoo.org> hmmer-2.3.2-r1.ebuild: + Added ~sparc keyword. + + 13 May 2005; Olivier Fisette <ribosome@gentoo.org> hmmer-2.3.2-r1.ebuild: + Added to x86. + +*hmmer-2.3.2-r1 (06 Mar 2005) + + 06 Mar 2005; Olivier Fisette <ribosome@gentoo.org> +hmmer-2.3.2-r1.ebuild: + Install header files, support for LFS, optional support for PVM and threads. + + 07 Feb 2005; <augustus@gentoo.org> hmmer-2.3.2.ebuild: + Marked amd64. + +*hmmer-2.3.2 (23 Dec 2004) + + 23 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml, + +files/Makefile-hmmer-2.2g.patch, +hmmer-2.3.2.ebuild: + Moved from app-sci/hmmer to sci-biology/hmmer. + + 31 Oct 2004; Olivier Fisette <ribosome@gentoo.org> -hmmer-2.3.1.ebuild, + hmmer-2.3.2.ebuild: + Added 2.3.2 to x86. Removed old version. + + 17 Oct 2004; David Holm <dholm@gentoo.org> hmmer-2.3.2.ebuild: + Added to ~ppc. + + 14 Oct 2004; Hasan Khalil <gongloo@gentoo.org> hmmer-2.3.2.ebuild: + Keyworded ~ppc-macos. + +*hmmer-2.3.2 (29 Sep 2004) + + 29 Sep 2004; Olivier Fisette <ribosome@gentoo.org> -hmmer-2.2g.ebuild, + +hmmer-2.3.2.ebuild: + New version 2.3.2. Removed old version. + + 18 Nov 2003; Stephen Diener <sediener@gentoo.org> hmmer-2.3.1.ebuild: + ~x86 -> x86 + +*hmmer-2.3.1 (28 Aug 2003) + + 28 Aug 2003; <sediener@gentoo.org> hmmer-2.3.1.ebuild: + Version bump + +*hmmer-2.2g (07 May 2003) + + 07 May 2003; Jon Portnoy <avenj@gentoo.org> hmmer-2.2g.ebuild : + Initial import. Ebuild submitted by Steve Diener and Gontran Zepeda + in bug #20449. |