diff options
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/clover/ChangeLog | 11 | ||||
| -rw-r--r-- | sci-biology/clover/Manifest | 5 | ||||
| -rw-r--r-- | sci-biology/clover/clover-2006.07.17.ebuild | 43 | ||||
| -rw-r--r-- | sci-biology/clover/metadata.xml | 6 |
4 files changed, 0 insertions, 65 deletions
diff --git a/sci-biology/clover/ChangeLog b/sci-biology/clover/ChangeLog deleted file mode 100644 index f99df3cc5..000000000 --- a/sci-biology/clover/ChangeLog +++ /dev/null @@ -1,11 +0,0 @@ -# ChangeLog for sci-biology/clover -# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - - 30 Jun 2007; Jakub Moc <jakub@gentoo.org> clover-2006.07.17.ebuild: - einfo -> elog; cosmetics - - 15 Mar 2007; AK <gentoo@horizon.ath.cx> +clover-2006.07.17.ebuild, - +metadata.xml: - new package (bug 142269) - diff --git a/sci-biology/clover/Manifest b/sci-biology/clover/Manifest deleted file mode 100644 index cb0db73f4..000000000 --- a/sci-biology/clover/Manifest +++ /dev/null @@ -1,5 +0,0 @@ -DIST clover-2006-07-17.tar.gz 15610 RMD160 e7f5c2b53afef2df292f9274b2a1ce2c1fbbc0c3 SHA1 f80b528ceb9833d0465b1196ae793c5364a87109 SHA256 e7b5b9fa8a341d49d9cf79a6d03ef0677a493f0c34a9a2f466a864575af91cb9 -DIST jaspar2005core 14913 RMD160 6fe43472cc1a2e0389ad9290801db56488773d3e SHA1 be8cdff62cf35f430c0c17f53564529b08000c9c SHA256 498a560c67411789106b50ccdfd9bc41f571d77c2fe9bfba7e95128c0a122fe4 -EBUILD clover-2006.07.17.ebuild 1046 RMD160 e624b0d3e5b31fe94c69d461567dbfd1f4878958 SHA1 357eacfb450ac899309388e0989fbf547af8bbbc SHA256 dff513326ca39ac6302e616705684c4325d6d6c914062d81f550bf7fb65ac42b -MISC ChangeLog 331 RMD160 c2d65a58bb342c00f31063c9c687aae09ede1e02 SHA1 9535d6a1cfafbb4b431647f507977a6f6fa3a4d2 SHA256 8016ea7b5bbba73c074d43ee62826f750539fd40f1fb7dc874c44175c1500e97 -MISC metadata.xml 229 RMD160 f0f6417bec31ce8baba6d476664f7210c8c84c98 SHA1 e5f94f5caadc6f843fc90bb7959570cd503676fd SHA256 3b08fca3c878bdfc4e7639f477dd542d55a4ab5dce39a475e82633071d13eb3f diff --git a/sci-biology/clover/clover-2006.07.17.ebuild b/sci-biology/clover/clover-2006.07.17.ebuild deleted file mode 100644 index 87ce70bb0..000000000 --- a/sci-biology/clover/clover-2006.07.17.ebuild +++ /dev/null @@ -1,43 +0,0 @@ -# Copyright 1999-2010 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -inherit versionator toolchain-funcs - -MY_PV=$(replace_all_version_separators '-') -MY_P="${PN}-${MY_PV}" -DESCRIPTION="Cis-eLement OVERrepresentation: Detection of functional DNA motifs" -HOMEPAGE="http://zlab.bu.edu/clover/" -SRC_URI="http://zlab.bu.edu/~mfrith/downloads/${MY_P}.tar.gz - http://zlab.bu.edu/clover/jaspar2005core" - -LICENSE="as-is" -SLOT="0" -IUSE="" -KEYWORDS="~x86" - -DEPEND="" -RDEPEND="" - -S="${WORKDIR}/${MY_P}" - -src_unpack() { - unpack ${MY_P}.tar.gz - sed -i "s:g++:$(tc-getCXX):; s:-Wall -O3:${CFLAGS}:" Makefile || die "sed failed" -} - -src_compile() { - emake || die "emake failed" -} - -src_install() { - dobin clover - insinto /usr/share/${PN} - doins "${DISTDIR}"/jaspar2005core || die "doins failed" -} - -pkg_postinst() { - elog "The motif library jaspar2005core has been installed in" - elog " /usr/share/clover/jaspar2005core" - elog "You can pass this library to clover for motif search, or use your own library." -} diff --git a/sci-biology/clover/metadata.xml b/sci-biology/clover/metadata.xml deleted file mode 100644 index e6233b5dc..000000000 --- a/sci-biology/clover/metadata.xml +++ /dev/null @@ -1,6 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> -<herd>no-herd</herd> -<maintainer><email>maintainer-wanted@gentoo.org</email></maintainer> -</pkgmetadata> |