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path: root/sci-biology/bioperl-db
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* sci-biology/bioperl-db: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-biology/bioperl-db: update EAPI 6 -> 8David Seifert2022-07-021-13/+17
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* **/metadata.xml: Replace http by https in DOCTYPE elementUlrich Müller2021-09-111-1/+1
| | | | | Bug: https://bugs.gentoo.org/552720 Signed-off-by: Ulrich Müller <ulm@gentoo.org>
* sci-biology/bioperl-db: Drop 1.6.9 (r0), EAPI5--Andreas Sturmlechner2021-08-191-47/+0
| | | | | | Closes: https://bugs.gentoo.org/808198 Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-biology/bioperl-db: x86 stable wrt bug #808198Agostino Sarubbo2021-08-191-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-biology/bioperl-db: amd64 stable wrt bug #808198Agostino Sarubbo2021-08-161-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-biology/bioperl-db: adjust mysql_install_db locationThomas Deutschmann2021-03-201-14/+29
| | | | | | | Since commit 755be857e3051, mysql_install_db location has changed. Package-Manager: Portage-3.0.17, Repoman-3.0.2 Signed-off-by: Thomas Deutschmann <whissi@gentoo.org>
* sci-biology/bioperl-db: Drop unmaintained -9999Michał Górny2019-12-151-37/+0
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-biology/*: Update Manifest hashesMichał Górny2017-12-101-1/+1
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* sci-biology/bioperl-db: use HTTPS for GitHubDavid Hicks2017-07-301-3/+2
| | | | Package-Manager: Portage-2.3.6, Repoman-2.3.3
* sci-biology/bioperl-db: Restrict tests re bug #421701Kent Fredric2017-07-183-46/+58
| | | | | | | | | | | | | | | | | I've tried an excessive amount to get tests working here. But they still need a lot of love. The work I've done so far only gets a mysql test instance up, ( and then, only tested with mariadb ) Somebody needs to work out what's missing to provision the databases that the tests use. Somebody needs to add support for initializing the other kinds of database. Any help here encouraged, but disabling non-functioning tests is the best we can do for now. Package-Manager: Portage-2.3.6, Repoman-2.3.2
* sci-biology/bioperl-db: EAPI6/-R1 BumpKent Fredric2017-07-182-0/+118
| | | | | | | | | - Test infa overhauled slightly - EAPI6ified - More test changes planned - -r1 bump mostly for double-safety around EAPI6 changes Package-Manager: Portage-2.3.6, Repoman-2.3.2
* sci-biology/bioperl-db: Fix broken test dependenciesKent Fredric2017-07-181-2/+15
| | | | | | | | | | | | | | Bundled versions of CPAN modules in t/ lacked all their dependencies being declared, leading to bundled copy of Test::Warn fail when Array::Compare was not installed. Additionally, parts didn't play nice together and warned about old versions of things. This is fixed buy uncermoniously removing all bundled test libraries and marking them as dependencies instead. Package-Manager: Portage-2.3.6, Repoman-2.3.2
* Drop $Id$ per council decision in bug #611234.Robin H. Johnson2017-02-282-2/+0
| | | | Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
* Set appropriate maintainer types in metadata.xml (GLEP 67)Michał Górny2016-01-241-1/+1
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* Replace all herds with appropriate projects (GLEP 67)Michał Górny2016-01-241-1/+4
| | | | | Replace all uses of herd with appropriate project maintainers, or no maintainers in case of herds requested to be disbanded.
* Revert DOCTYPE SYSTEM https changes in metadata.xmlMike Gilbert2015-08-241-1/+1
| | | | | | | repoman does not yet accept the https version. This partially reverts eaaface92ee81f30a6ac66fe7acbcc42c00dc450. Bug: https://bugs.gentoo.org/552720
* Use https by defaultJustin Lecher2015-08-241-1/+1
| | | | | | Convert all URLs for sites supporting encrypted connections from http to https Signed-off-by: Justin Lecher <jlec@gentoo.org>
* proj/gentoo: Initial commitRobin H. Johnson2015-08-084-0/+82
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed