diff options
| author |   Olivier Fisette <ribosome@gentoo.org> | 2006-08-17 03:00:14 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2006-08-17 03:00:14 +0000 |
| commit | 03caf9c25db923fb7b133d533c3ffdfa882d71f6 (patch) | |
| tree | 022aa0cb8d698daf4a50196a9401cf22a3496c96 /sci-biology/rebase | |
| parent | use the qt3 eclass (diff) | |
| download | gentoo-2-03caf9c25db923fb7b133d533c3ffdfa882d71f6.tar.gz gentoo-2-03caf9c25db923fb7b133d533c3ffdfa882d71f6.tar.bz2 gentoo-2-03caf9c25db923fb7b133d533c3ffdfa882d71f6.zip | |
New upstream version
(Portage version: 2.1-r2)
Diffstat (limited to 'sci-biology/rebase')
| -rw-r--r-- | sci-biology/rebase/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/rebase/files/digest-rebase-608 | 3 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-608.ebuild | 42 |
3 files changed, 51 insertions, 1 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index 3967977e7bb6..5121c66dce23 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/rebase # Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.67 2006/07/12 01:22:20 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.68 2006/08/17 03:00:14 ribosome Exp $ + +*rebase-608 (17 Aug 2006) + + 17 Aug 2006; Olivier Fisette <ribosome@gentoo.org> +rebase-608.ebuild: + New upstream version. *rebase-607 (12 Jul 2006) diff --git a/sci-biology/rebase/files/digest-rebase-608 b/sci-biology/rebase/files/digest-rebase-608 new file mode 100644 index 000000000000..551b749a06eb --- /dev/null +++ b/sci-biology/rebase/files/digest-rebase-608 @@ -0,0 +1,3 @@ +MD5 1d84581da57e1b8ebd8081ee69d506b9 rebase-608.tar.bz2 184005 +RMD160 1bc2d4f3af896ba05119a38fa99d40a9634419e6 rebase-608.tar.bz2 184005 +SHA256 4ed73c49f51972787cac53380fbc2e82aae3e8eab14799897a4f49a8a93192c0 rebase-608.tar.bz2 184005 diff --git a/sci-biology/rebase/rebase-608.ebuild b/sci-biology/rebase/rebase-608.ebuild new file mode 100644 index 000000000000..3d959728b6a8 --- /dev/null +++ b/sci-biology/rebase/rebase-608.ebuild @@ -0,0 +1,42 @@ +# Copyright 1999-2006 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-608.ebuild,v 1.1 2006/08/17 03:00:14 ribosome Exp $ + +DESCRIPTION="A restriction enzyme database" +LICENSE="public-domain" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="mirror://gentoo/${P}.tar.bz2" + +SLOT="0" +# Minimal build keeps only the indexed files (if applicable) and the +# documentation. The non-indexed database is not installed. +IUSE="emboss minimal" +KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64" + +DEPEND="emboss? ( >=sci-biology/emboss-3.0.0-r1 )" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${PV} \ + -protofile proto.${PV} || die "Indexing ${PN} failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${PV} proto.${PV} || die \ + "Failed to install raw database." + fi + newdoc REBASE.DOC README || die "Failed to install documentation." + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} || die \ + "Failed to install EMBOSS data files." + insinto /usr/share/EMBOSS/data + doins embossre.equ || die "Failed to install enzyme prototypes file." + fi +} |