sci-biology/wgs-assembler: Respect LDFLAGS, #331935; fix linking with gold; handle static-libs

(Portage version: 2.2.0_alpha142/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)

6 files changed, 320 insertions, 9 deletions

diff --git a/sci-biology/wgs-assembler/ChangeLog b/sci-biology/wgs-assembler/ChangeLog
index 59f24db3285d..83aaee0e6ef8 100644
--- a/sci-biology/wgs-assembler/ChangeLog
+++ b/sci-biology/wgs-assembler/ChangeLog
@@ -1,6 +1,13 @@
 # ChangeLog for sci-biology/wgs-assembler
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/wgs-assembler/ChangeLog,v 1.9 2012/02/06 09:12:38 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/wgs-assembler/ChangeLog,v 1.10 2012/11/10 12:01:51 jlec Exp $
+
+*wgs-assembler-7.0-r1 (10 Nov 2012)
+
+  10 Nov 2012; Justin Lecher <jlec@gentoo.org> wgs-assembler-5.4.ebuild,
+  wgs-assembler-6.1.ebuild, wgs-assembler-7.0.ebuild,
+  +wgs-assembler-7.0-r1.ebuild, +files/wgs-assembler-7.0-build.patch:
+  Respect LDFLAGS, #331935; fix linking with gold; handle static-libs
 
 *wgs-assembler-7.0 (06 Feb 2012)
 
diff --git a/sci-biology/wgs-assembler/files/wgs-assembler-7.0-build.patch b/sci-biology/wgs-assembler/files/wgs-assembler-7.0-build.patch
new file mode 100644
index 000000000000..f7fb44743968
--- /dev/null
+++ b/sci-biology/wgs-assembler/files/wgs-assembler-7.0-build.patch
@@ -0,0 +1,229 @@
+ kmer/Make.rules   |  4 ++--
+ kmer/configure.sh | 20 +++++++++----------
+ src/c_make.as     | 58 +++++++++++++++++++++++++++----------------------------
+ src/c_make.gen    |  4 ++--
+ 4 files changed, 43 insertions(+), 43 deletions(-)
+
+diff --git a/kmer/Make.rules b/kmer/Make.rules
+index f904b13..5c2d477 100644
+--- a/kmer/Make.rules
++++ b/kmer/Make.rules
+@@ -139,12 +139,12 @@ ${ALL_CXX_DEPS}:%.d:%
+ ## EXE targets
+ ALL_C_EXES   :=$(strip $(foreach x,${//},${${x:.=.C_EXES}}))
+ ${ALL_C_EXES}:
+-	${-CC} ${CLD} ${CLDFLAGS} -o $@ $+ ${CLIBS}
++	${-CC} ${CLD} ${CLDFLAGS} ${LDFLAGS} -o $@ $+ ${CLIBS}
+ __SUBGOALS__+=$${${1:.=.C_EXES}}
+ 
+ ALL_CXX_EXES :=$(strip $(foreach x,${//},${${x:.=.CXX_EXES}}))
+ ${ALL_CXX_EXES}:
+-	${-CXX} ${CXXLD} ${CXXLDFLAGS} -o $@ $+ ${CXXLIBS}
++	${-CXX} ${CXXLD} ${CXXLDFLAGS} ${LDFLAGS} -o $@ $+ ${CXXLIBS}
+ __SUBGOALS__+=$${${1:.=.CXX_EXES}}
+ 
+ define .RULE-install-copy-C-CXX-EXES
+diff --git a/kmer/configure.sh b/kmer/configure.sh
+index 2f0d5ea..9daf89f 100755
+--- a/kmer/configure.sh
++++ b/kmer/configure.sh
+@@ -254,13 +254,13 @@ EOF
+ # -*- makefile -*-
+ #  Linux, optimized
+ CC                := $CC
+-SHLIB_FLAGS       := -shared
+-CFLAGS_COMPILE    := -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_REENTRANT -O3 -D_THREAD_SAFE -pthread -fmessage-length=0 -Wall -Wno-char-subscripts -funroll-loops -fexpensive-optimizations -finline-functions -fomit-frame-pointer
+-CLDFLAGS          := -L/usr/local/lib
++SHLIB_FLAGS       := -shared ${LDFLAGS}
++CFLAGS_COMPILE    := -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_REENTRANT -D_THREAD_SAFE -pthread -fmessage-length=0 -Wall -Wno-char-subscripts
++CLDFLAGS          := 
+ CLIBS             := -pthread -ldl
+ CXX               := $CXX
+-CXXFLAGS_COMPILE  := -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_REENTRANT -O3 -D_THREAD_SAFE -pthread -fmessage-length=0 -Wall -Wno-char-subscripts -funroll-loops -fexpensive-optimizations -finline-functions -fomit-frame-pointer
+-CXXLDFLAGS        := -L/usr/local/lib
++CXXFLAGS_COMPILE  := -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_REENTRANT -O3 -D_THREAD_SAFE -pthread -fmessage-length=0 -Wall -Wno-char-subscripts
++CXXLDFLAGS        := 
+ CXXLIBS           := -pthread -ldl
+ ARFLAGS           := ruvs
+ INSTALL/          := $target/
+@@ -272,13 +272,13 @@ EOF
+ # -*- makefile -*-
+ #  Linux64, optimized
+ CC                := $CC
+-SHLIB_FLAGS       := -shared
+-CFLAGS_COMPILE    := -m64 -fPIC -D_REENTRANT -O3 -D_THREAD_SAFE -pthread -fmessage-length=0 -Wall -Wno-char-subscripts -funroll-loops -fexpensive-optimizations -finline-functions -fomit-frame-pointer
+-CLDFLAGS          := -L/usr/local/lib
++SHLIB_FLAGS       := -shared ${LDFLAGS}
++CFLAGS_COMPILE    := -fPIC -D_REENTRANT -D_THREAD_SAFE -pthread -fmessage-length=0 -Wall -Wno-char-subscripts
++CLDFLAGS          := 
+ CLIBS             := -pthread -ldl
+ CXX               := $CXX
+-CXXFLAGS_COMPILE  := -m64 -fPIC -D_REENTRANT -O3 -D_THREAD_SAFE -pthread -fmessage-length=0 -Wall -Wno-char-subscripts -funroll-loops -fexpensive-optimizations -finline-functions -fomit-frame-pointer
+-CXXLDFLAGS        := -L/usr/local/lib
++CXXFLAGS_COMPILE  := -fPIC -D_REENTRANT -D_THREAD_SAFE -pthread -fmessage-length=0 -Wall -Wno-char-subscripts
++CXXLDFLAGS        := 
+ CXXLIBS           := -pthread -ldl
+ ARFLAGS           := ruvs
+ INSTALL/          := $target/
+diff --git a/src/c_make.as b/src/c_make.as
+index 0172807..4304589 100644
+--- a/src/c_make.as
++++ b/src/c_make.as
+@@ -64,27 +64,27 @@ include $(LOCAL_WORK)/src/c_make.gen
+ 
+ ifeq ($(OSTYPE), Linux)
+   ifeq ($(MACHINETYPE), i686)
+-    ARCH_LDFLAGS  += -pthread -lm
+-    ARCH_CFLAGS   += -pthread -Wall -Wimplicit -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DX86_GCC_LINUX
++    LINK_LIBS  += -pthread -lm
++    ARCH_CFLAGS   += -pthread -Wall  -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DX86_GCC_LINUX
+     ARCH_LIB       = /usr/X11R6/lib
+   endif
+   ifeq ($(MACHINETYPE), amd64)
+-    ARCH_LDFLAGS  += -pthread -lm
+-    ARCH_CFLAGS   += -pthread -Wall -Wimplicit -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DX86_GCC_LINUX
++    LINK_LIBS  += -pthread -lm
++    ARCH_CFLAGS   += -pthread -Wall  -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DX86_GCC_LINUX
+     ARCH_LIB       = /usr/lib64 /usr/X11R6/lib64
+   endif
+   ifeq ($(MACHINETYPE), ia64)
+-    ARCH_LDFLAGS  += -pthread -lm
+-    ARCH_CFLAGS   += -pthread -Wall -Wimplicit -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64
++    LINK_LIBS  += -pthread -lm
++    ARCH_CFLAGS   += -pthread -Wall  -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64
+     ARCH_LIB       = /usr/X11R6/lib
+   endif
+ 
+   ifeq ($(BUILDDEBUG), 1)
+-    ARCH_CFLAGS  += -g 
+-    ARCH_LDFLAGS +=
++    ARCH_CFLAGS  +=  
++    LINK_LIBS +=
+   else
+-    ARCH_CFLAGS  += -O2
+-    ARCH_LDFLAGS += -Wl,-O1
++    ARCH_CFLAGS  += 
++    LINK_LIBS += 
+   endif
+ endif
+ 
+@@ -94,19 +94,19 @@ endif
+ 
+ ifeq ($(OSTYPE), FreeBSD)
+   ifeq ($(MACHINETYPE), i386)
+-    ARCH_LDFLAGS    += -pthread -lthr -lm
+-    ARCH_CFLAGS      = -pthread -Wall -Wimplicit -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare
+-    ARCH_CFLAGS      = -pthread       -Wimplicit -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare
++    LINK_LIBS    += -pthread -lthr -lm
++    ARCH_CFLAGS      = -pthread -Wall  -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare
++    ARCH_CFLAGS      = -pthread        -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare
+   endif
+   ifeq ($(MACHINETYPE), amd64)
+-    ARCH_LDFLAGS    += -pthread -lthr -lm
+-    ARCH_CFLAGS      =  -pthread               -Wimplicit -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -Wformat
+-    ARCH_CFLAGS      =  -pthread -Wall -Wextra -Wimplicit -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -Wformat
++    LINK_LIBS    += -pthread -lthr -lm
++    ARCH_CFLAGS      =  -pthread                -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -Wformat
++    ARCH_CFLAGS      =  -pthread -Wall -Wextra  -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -Wformat
+   endif
+ 
+   ifeq ($(BUILDCOVERAGE), 1)
+     ARCH_CFLAGS   += -g -fprofile-arcs -ftest-coverage
+-    ARCH_LDFLAGS  += -lgcov
++    LINK_LIBS  += -lgcov
+   else
+     ifeq ($(BUILDDEBUG), 1)
+       ARCH_CFLAGS   += -g
+@@ -140,14 +140,14 @@ ifeq ($(OSTYPE), Darwin)
+ 
+   ifeq ($(MACHINETYPE), i386)
+     ifeq ($(BUILDDEBUG), 1)
+-      ARCH_CFLAGS   += -fPIC -m64 -fmessage-length=0 -D_THREAD_SAFE -Wall -Wimplicit -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -g
+-      ARCH_LDFLAGS  += -m64 -lm
++      ARCH_CFLAGS   += -fPIC -m64 -fmessage-length=0 -D_THREAD_SAFE -Wall  -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -g
++      LINK_LIBS  += -m64 -lm
+     else
+ #  Wow, -Wshorten-64-to-32  is tough
+-      ARCH_CFLAGS   += -fPIC -m64 -fmessage-length=0 -D_THREAD_SAFE       -Wimplicit -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -fast
++      ARCH_CFLAGS   += -fPIC -m64 -fmessage-length=0 -D_THREAD_SAFE        -Wno-write-strings -Wno-unused -Wno-char-subscripts -Wno-sign-compare -fast
+ #     ARCH_CFLAGS   += -Wextra
+ #     ARCH_CFLAGS   += -pedantic  (see above about pedantic)
+-      ARCH_LDFLAGS  += -m64 -lm
++      LINK_LIBS  += -m64 -lm
+     endif
+   endif
+ 
+@@ -161,23 +161,23 @@ endif
+ ifeq ($(OSTYPE), SunOS)
+   ifeq ($(MACHINETYPE), i86pc)
+     ARCH_CFLAGS    = -DBYTE_ORDER=LITTLE_ENDIAN -DANSI_C -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -pthreads
+-    ARCH_LDFLAGS  += -lm
++    LINK_LIBS  += -lm
+   endif
+ 
+   ifeq ($(MACHINETYPE), sparc32)
+     ARCH_CFLAGS    = -DANSI_C -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -pthreads
+-    ARCH_LDFLAGS  += -lm -lnsl -lsocket
++    LINK_LIBS  += -lm -lnsl -lsocket
+   endif
+ 
+   ifeq ($(MACHINETYPE), sparc64)
+     ARCH_CFLAGS    = -m64 -DANSI_C -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -pthreads
+-    ARCH_LDFLAGS  += -m64 -lm -lnsl -lsocket
++    LINK_LIBS  += -lm -lnsl -lsocket
+   endif
+ 
+   ifeq ($(BUILDDEBUG), 1)
+-    ARCH_CFLAGS   += -g
++    ARCH_CFLAGS   +=
+   else
+-    ARCH_CFLAGS   += -O
++    ARCH_CFLAGS   +=
+   endif
+ endif
+ 
+@@ -186,14 +186,14 @@ endif
+ 
+ ifeq ($(BUILDPROFILE), 1)
+   ARCH_CFLAGS  += -pg
+-  ARCH_LDFLAGS += -pg
++  LINK_LIBS += -pg
+ endif
+ 
+ # One can argue that CXXFLAGS should be separate.  For now, we only
+ # add to the flags.
+ 
+ CFLAGS          += $(ARCH_CFLAGS)
+-CXXFLAGS        += $(ARCH_CFLAGS) $(ARCH_CXXFLAGS)
++CXXFLAGS        += $(ARCH_CXXFLAGS)
+ LDFLAGS         += $(ARCH_LDFLAGS)
+ 
+ INC_IMPORT_DIRS += $(LOCAL_WORK)/src $(patsubst %, $(LOCAL_WORK)/src/%, $(strip $(SUBDIRS)))
+@@ -205,7 +205,7 @@ LIB_IMPORT_DIRS += $(ARCH_LIB)
+ OBJ_SEARCH_PATH  = $(LOCAL_OBJ)
+ 
+ ifeq ($(SITE_NAME), JCVI)
+-  LDFLAGS += -lcurl
++  LINK_LIBS += -lcurl
+ endif
+ 
+ #  The order of compilation here is very carefully chosen to be the
+diff --git a/src/c_make.gen b/src/c_make.gen
+index 7b5227c..c27b777 100644
+--- a/src/c_make.gen
++++ b/src/c_make.gen
+@@ -396,12 +396,12 @@ $(LIBRARIES):
+ $(C_PROGS):
+ 	@ echo "++++++++++++++++++++ " $@ "++++++++++++++++++++++";
+ 	cd $(LOCAL_OBJ); \
+-	  $(CC) -o $(LOCAL_BIN)/$(notdir $@) $(filter-out lib%.a, $+) $(patsubst lib%.a, -l%, $(filter lib%.a, $+)) $(LD_DIRS) $(LDFLAGS)
++	  $(CC) $(LDFLAGS) -o $(LOCAL_BIN)/$(notdir $@) $(filter-out lib%.a, $+) $(patsubst lib%.a, -l%, $(filter lib%.a, $+)) $(LD_DIRS) $(LINK_LIBS)
+ 
+ $(CXX_PROGS):
+ 	@ echo "++++++++++++++++++++ " $@ "++++++++++++++++++++++";
+ 	cd $(LOCAL_OBJ); \
+-          $(CXX) -o $(LOCAL_BIN)/$(notdir $@) $(filter-out lib%.a, $+) $(patsubst lib%.a, -l%, $(filter lib%.a, $+)) $(LD_DIRS) $(LDFLAGS)
++          $(CXX) $(LDFLAGS) -o $(LOCAL_BIN)/$(notdir $@) $(filter-out lib%.a, $+) $(patsubst lib%.a, -l%, $(filter lib%.a, $+)) $(LD_DIRS) $(LINK_LIBS)
+ 
+ $(SCRIPT_PROGS): %.sh:
+ 	@echo "++++++++++++++++++++ " $@ "++++++++++++++++++++++";
diff --git a/sci-biology/wgs-assembler/wgs-assembler-5.4.ebuild b/sci-biology/wgs-assembler/wgs-assembler-5.4.ebuild
index 5ac658cc05f2..78654445f5a1 100644
--- a/sci-biology/wgs-assembler/wgs-assembler-5.4.ebuild
+++ b/sci-biology/wgs-assembler/wgs-assembler-5.4.ebuild
@@ -1,10 +1,10 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/wgs-assembler/wgs-assembler-5.4.ebuild,v 1.6 2011/03/20 20:19:27 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/wgs-assembler/wgs-assembler-5.4.ebuild,v 1.7 2012/11/10 12:01:51 jlec Exp $
 
 EAPI="2"
 
-inherit eutils toolchain-funcs
+inherit eutils multilib toolchain-funcs
 
 DESCRIPTION="A de novo whole-genome shotgun DNA sequence assembler, also known as the Celera Assembler and CABOG"
 HOMEPAGE="http://sourceforge.net/projects/wgs-assembler/"
diff --git a/sci-biology/wgs-assembler/wgs-assembler-6.1.ebuild b/sci-biology/wgs-assembler/wgs-assembler-6.1.ebuild
index fc0cec90c551..2bb54da6921b 100644
--- a/sci-biology/wgs-assembler/wgs-assembler-6.1.ebuild
+++ b/sci-biology/wgs-assembler/wgs-assembler-6.1.ebuild
@@ -1,10 +1,10 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/wgs-assembler/wgs-assembler-6.1.ebuild,v 1.3 2011/03/20 20:19:27 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/wgs-assembler/wgs-assembler-6.1.ebuild,v 1.4 2012/11/10 12:01:51 jlec Exp $
 
 EAPI="2"
 
-inherit eutils toolchain-funcs
+inherit eutils multilib toolchain-funcs
 
 DESCRIPTION="A de novo whole-genome shotgun DNA sequence assembler, also known as the Celera Assembler and CABOG"
 HOMEPAGE="http://sourceforge.net/projects/wgs-assembler/"
diff --git a/sci-biology/wgs-assembler/wgs-assembler-7.0-r1.ebuild b/sci-biology/wgs-assembler/wgs-assembler-7.0-r1.ebuild
new file mode 100644
index 000000000000..da3b225f16c3
--- /dev/null
+++ b/sci-biology/wgs-assembler/wgs-assembler-7.0-r1.ebuild
@@ -0,0 +1,75 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/wgs-assembler/wgs-assembler-7.0-r1.ebuild,v 1.1 2012/11/10 12:01:51 jlec Exp $
+
+EAPI=4
+
+PYTHON_DEPEND=2
+
+inherit eutils python toolchain-funcs
+
+DESCRIPTION="A de novo whole-genome shotgun DNA sequence assembler, also known as the Celera Assembler and CABOG"
+HOMEPAGE="http://sourceforge.net/projects/wgs-assembler/"
+SRC_URI="mirror://sourceforge/${PN}/wgs-${PV}.tar.bz2"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="static-libs"
+
+DEPEND="
+	x11-libs/libXt
+	!x11-terms/terminator"
+RDEPEND="${DEPEND}
+	app-shells/tcsh
+	dev-perl/Log-Log4perl"
+
+S="${WORKDIR}/wgs-${PV}"
+
+pkg_setup() {
+	python_set_active_version 2
+	python_pkg_setup
+}
+
+src_prepare() {
+	epatch \
+		"${FILESDIR}"/${P}-build.patch
+	tc-export CC CXX
+}
+
+src_configure() {
+	cd "${S}/kmer"
+	./configure.sh || die
+}
+
+src_compile() {
+	# not really an install target
+	emake -C kmer -j1 install
+	emake -C src -j1 SITE_NAME=LOCAL
+}
+
+src_install() {
+	OSTYPE=$(uname)
+	MACHTYPE=$(uname -m)
+	MACHTYPE=${MACHTYPE/x86_64/amd64}
+	MY_S="${OSTYPE}-${MACHTYPE}"
+	sed -i 's|#!/usr/local/bin/|#!/usr/bin/env |' $(find $MY_S -type f) || die
+
+	sed -i '/sub getBinDirectory ()/ a return "/usr/bin";' ${MY_S}/bin/runCA* || die
+	sed -i '/sub getBinDirectoryShellCode ()/ a return "bin=/usr/bin\n";' ${MY_S}/bin/runCA* || die
+	sed -i '1 a use lib "/usr/share/'${PN}'/lib";' $(find $MY_S -name '*.p*') || die
+
+	dobin kmer/${MY_S}/bin/*
+	insinto /usr/$(get_libdir)/${PN}
+	use static-libs && doins kmer/${MY_S}/lib/*
+
+	insinto /usr/include/${PN}
+	doins kmer/${MY_S}/include/*
+
+	insinto /usr/share/${PN}/lib
+	doins -r ${MY_S}/bin/TIGR
+	rm -rf ${MY_S}/bin/TIGR || die
+	dobin ${MY_S}/bin/*
+	use static-libs && dolib.a ${MY_S}/lib/*
+	dodoc README
+}
diff --git a/sci-biology/wgs-assembler/wgs-assembler-7.0.ebuild b/sci-biology/wgs-assembler/wgs-assembler-7.0.ebuild
index ddb80f0c3b09..170c6854e528 100644
--- a/sci-biology/wgs-assembler/wgs-assembler-7.0.ebuild
+++ b/sci-biology/wgs-assembler/wgs-assembler-7.0.ebuild
@@ -1,10 +1,10 @@
 # Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/wgs-assembler/wgs-assembler-7.0.ebuild,v 1.1 2012/02/06 09:12:38 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/wgs-assembler/wgs-assembler-7.0.ebuild,v 1.2 2012/11/10 12:01:51 jlec Exp $
 
 EAPI="2"
 
-inherit eutils toolchain-funcs
+inherit eutils multilib toolchain-funcs
 
 DESCRIPTION="A de novo whole-genome shotgun DNA sequence assembler, also known as the Celera Assembler and CABOG"
 HOMEPAGE="http://sourceforge.net/projects/wgs-assembler/"