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| author |   Olivier Fisette <ribosome@gentoo.org> | 2006-10-08 01:53:40 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2006-10-08 01:53:40 +0000 |
| commit | 60de3b1542b435e045aeb752dc6e12ae16f39393 (patch) | |
| tree | ddb876800f9f8615f76d9833b6adde31f1cc2393 /sci-biology | |
| parent | Version bump. removed old version. (diff) | |
| download | gentoo-2-60de3b1542b435e045aeb752dc6e12ae16f39393.tar.gz gentoo-2-60de3b1542b435e045aeb752dc6e12ae16f39393.tar.bz2 gentoo-2-60de3b1542b435e045aeb752dc6e12ae16f39393.zip | |
New upstream version
(Portage version: 2.1.1)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/rebase/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/rebase/files/digest-rebase-610 | 3 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-610.ebuild | 42 |
3 files changed, 51 insertions, 1 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index b6881eb4c37a..993167f72850 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/rebase # Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.71 2006/09/12 20:24:54 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.72 2006/10/08 01:53:40 ribosome Exp $ + +*rebase-610 (08 Oct 2006) + + 08 Oct 2006; Olivier Fisette <ribosome@gentoo.org> +rebase-610.ebuild: + New upstream version. *rebase-609 (12 Sep 2006) diff --git a/sci-biology/rebase/files/digest-rebase-610 b/sci-biology/rebase/files/digest-rebase-610 new file mode 100644 index 000000000000..27823be7f328 --- /dev/null +++ b/sci-biology/rebase/files/digest-rebase-610 @@ -0,0 +1,3 @@ +MD5 dc9c04566e46ff8f3796f245e8fdfa07 rebase-610.tar.bz2 183836 +RMD160 f39b66acd481383f4b2dda932ad42d902bd23d34 rebase-610.tar.bz2 183836 +SHA256 f558655b399ab51cbfdf7bc3982025a7af66484528453360742bd45eac85b61d rebase-610.tar.bz2 183836 diff --git a/sci-biology/rebase/rebase-610.ebuild b/sci-biology/rebase/rebase-610.ebuild new file mode 100644 index 000000000000..55fe5a5cda1e --- /dev/null +++ b/sci-biology/rebase/rebase-610.ebuild @@ -0,0 +1,42 @@ +# Copyright 1999-2006 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-610.ebuild,v 1.1 2006/10/08 01:53:40 ribosome Exp $ + +DESCRIPTION="A restriction enzyme database" +LICENSE="public-domain" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="mirror://gentoo/${P}.tar.bz2" + +SLOT="0" +# Minimal build keeps only the indexed files (if applicable) and the +# documentation. The non-indexed database is not installed. +IUSE="emboss minimal" +KEYWORDS="~amd64 ~ppc ~ppc-macos ~ppc64 ~sparc ~x86" + +DEPEND="emboss? ( >=sci-biology/emboss-3.0.0-r1 )" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${PV} \ + -protofile proto.${PV} || die "Indexing Rebase failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${PV} proto.${PV} || die \ + "Failed to install raw database." + fi + newdoc REBASE.DOC README || die "Failed to install documentation." + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} || die \ + "Failed to install EMBOSS data files." + insinto /usr/share/EMBOSS/data + doins embossre.equ || die "Failed to install enzyme prototypes file." + fi +} |