summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorMarkus Dittrich <markusle@gentoo.org>2008-01-27 12:25:36 +0000
committerMarkus Dittrich <markusle@gentoo.org>2008-01-27 12:25:36 +0000
commit9ba8ea8981391df9c377120411abfda7a33bc416 (patch)
treef06f89f1941e47b6fea2ca433209be34ef5c0114 /sci-biology
parentMarked stable on amd64 as per bug 207640. (diff)
downloadgentoo-2-9ba8ea8981391df9c377120411abfda7a33bc416.tar.gz
gentoo-2-9ba8ea8981391df9c377120411abfda7a33bc416.tar.bz2
gentoo-2-9ba8ea8981391df9c377120411abfda7a33bc416.zip
Version bump (see bug #191864).
(Portage version: 2.1.4)
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/elph/ChangeLog9
-rw-r--r--sci-biology/elph/elph-0.1.5.ebuild4
-rw-r--r--sci-biology/elph/elph-1.0.1.ebuild36
-rw-r--r--sci-biology/elph/files/digest-elph-1.0.13
4 files changed, 48 insertions, 4 deletions
diff --git a/sci-biology/elph/ChangeLog b/sci-biology/elph/ChangeLog
index a03eec006967..364601497fe8 100644
--- a/sci-biology/elph/ChangeLog
+++ b/sci-biology/elph/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/elph
-# Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/ChangeLog,v 1.10 2007/02/22 01:25:49 jokey Exp $
+# Copyright 2000-2008 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/ChangeLog,v 1.11 2008/01/27 12:25:35 markusle Exp $
+
+*elph-1.0.1 (27 Jan 2008)
+
+ 27 Jan 2008; Markus Dittrich <markusle@gentoo.org> +elph-1.0.1.ebuild:
+ Version bump (see bug #191864).
22 Feb 2007; Markus Ullmann <jokey@gentoo.org> ChangeLog:
Redigest for Manifest2
diff --git a/sci-biology/elph/elph-0.1.5.ebuild b/sci-biology/elph/elph-0.1.5.ebuild
index 0d7d77b6a1d0..104105735b18 100644
--- a/sci-biology/elph/elph-0.1.5.ebuild
+++ b/sci-biology/elph/elph-0.1.5.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2005 Gentoo Foundation
+# Copyright 1999-2008 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/elph-0.1.5.ebuild,v 1.7 2005/10/18 01:05:39 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/elph-0.1.5.ebuild,v 1.8 2008/01/27 12:25:35 markusle Exp $
inherit eutils toolchain-funcs
diff --git a/sci-biology/elph/elph-1.0.1.ebuild b/sci-biology/elph/elph-1.0.1.ebuild
new file mode 100644
index 000000000000..0457d2237e65
--- /dev/null
+++ b/sci-biology/elph/elph-1.0.1.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2008 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/elph-1.0.1.ebuild,v 1.1 2008/01/27 12:25:35 markusle Exp $
+
+inherit eutils toolchain-funcs
+
+DESCRIPTION="Estimated Locations of Pattern Hits - Motif finder program"
+LICENSE="Artistic"
+HOMEPAGE="http://cbcb.umd.edu/software/ELPH/"
+SRC_URI="ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-${PV}.tar.gz"
+
+SLOT="0"
+IUSE=""
+KEYWORDS="~x86 ~ppc-macos ~amd64"
+
+S="${WORKDIR}/ELPH/sources"
+
+src_unpack() {
+ unpack ${A}
+ cd "${S}"
+ sed -i -e "s/CC := g++/CC := $(tc-getCXX)/" \
+ -e "s/-D_REENTRANT -g/-D_REENTRANT ${CXXFLAGS}/" \
+ -e "s/LINKER := g++/LINKER := $(tc-getCXX)/" \
+ Makefile || die "Failed to patch Makefile."
+}
+
+src_compile() {
+ emake || die "Compilation failed."
+}
+
+src_install() {
+ dobin elph || "Failed to install program."
+ cd "${WORKDIR}"/ELPH
+ dodoc VERSION || die "Documentation installation failed."
+ newdoc Readme.ELPH README || die "Readme installation failed."
+}
diff --git a/sci-biology/elph/files/digest-elph-1.0.1 b/sci-biology/elph/files/digest-elph-1.0.1
new file mode 100644
index 000000000000..72292f6948a6
--- /dev/null
+++ b/sci-biology/elph/files/digest-elph-1.0.1
@@ -0,0 +1,3 @@
+MD5 eb96b4dde3ab12ba1f31a4230a829ff3 ELPH-1.0.1.tar.gz 113476
+RMD160 854bc34aba30f1c7493536e1b2e36dd8143af7e7 ELPH-1.0.1.tar.gz 113476
+SHA256 6d944401d2457d75815a34dbb5780f05df569eb1edfd00909b33c4c4c4ff40b9 ELPH-1.0.1.tar.gz 113476