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authorJustin Lecher <jlec@gentoo.org>2015-03-15 10:55:14 +0000
committerJustin Lecher <jlec@gentoo.org>2015-03-15 10:55:14 +0000
commite6b6f03777f2f4ef7808481d31643550f84cb789 (patch)
tree5876a32d702d40e90dc8462103c99437b68b4077 /sci-biology
parentx86/ppc64 stable, bug #517718 (diff)
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Drop old
(Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/vaal/ChangeLog9
-rw-r--r--sci-biology/vaal/vaal-42179.ebuild42
-rw-r--r--sci-biology/vaal/vaal-45166.ebuild42
3 files changed, 6 insertions, 87 deletions
diff --git a/sci-biology/vaal/ChangeLog b/sci-biology/vaal/ChangeLog
index d783ff143631..46b6d5e7c79c 100644
--- a/sci-biology/vaal/ChangeLog
+++ b/sci-biology/vaal/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/vaal
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vaal/ChangeLog,v 1.14 2013/11/12 17:44:27 jlec Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vaal/ChangeLog,v 1.15 2015/03/15 10:55:14 jlec Exp $
+
+ 15 Mar 2015; Justin Lecher <jlec@gentoo.org> -vaal-42179.ebuild,
+ -vaal-45166.ebuild:
+ Drop old
12 Nov 2013; Justin Lecher <jlec@gentoo.org> vaal-1.6.ebuild,
vaal-42179.ebuild, vaal-45166.ebuild, vaal-46233.ebuild:
@@ -67,4 +71,3 @@
07 Jul 2009; Andrey Kislyuk <weaver@gentoo.org> +metadata.xml,
+vaal-1.2.ebuild:
New package, ebuild written by me
-
diff --git a/sci-biology/vaal/vaal-42179.ebuild b/sci-biology/vaal/vaal-42179.ebuild
deleted file mode 100644
index a7c81a9f9860..000000000000
--- a/sci-biology/vaal/vaal-42179.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vaal/vaal-42179.ebuild,v 1.2 2013/11/12 17:44:27 jlec Exp $
-
-EAPI=4
-
-AUTOTOOLS_AUTORECONF=yes
-
-inherit autotools-utils
-
-DESCRIPTION="A variant ascertainment algorithm that can be used to detect SNPs, indels, and other polymorphisms"
-HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd/"
-SRC_URI="
- ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/${P}.tar.gz
- ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc"
-
-LICENSE="Whitehead-MIT"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="openmp"
-
-DEPEND=">=dev-libs/boost-1.41.0-r3"
-RDEPEND="${DEPEND}"
-
-DOCS=( "${DISTDIR}/VAAL_manual.doc" )
-
-src_prepare() {
- sed \
- -e '/COPYING/d' \
- -i src/Makefile.am || die
-
- sed \
- -e 's:-ggdb3::g' \
- -e '/AC_OPENMP_CEHCK/d' \
- -i configure.ac || die
- autotools-utils_src_prepare
-}
-
-src_configure(){
- local myeconfargs=( $(use_enable openmp) )
- autotools-utils_src_configure
-}
diff --git a/sci-biology/vaal/vaal-45166.ebuild b/sci-biology/vaal/vaal-45166.ebuild
deleted file mode 100644
index 52c29204cf4e..000000000000
--- a/sci-biology/vaal/vaal-45166.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vaal/vaal-45166.ebuild,v 1.2 2013/11/12 17:44:27 jlec Exp $
-
-EAPI=5
-
-AUTOTOOLS_AUTORECONF=yes
-
-inherit autotools-utils
-
-DESCRIPTION="A variant ascertainment algorithm that can be used to detect SNPs, indels, and other polymorphisms"
-HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd/"
-SRC_URI="
- ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/${P}.tar.gz
- ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc"
-
-LICENSE="Whitehead-MIT"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="openmp"
-
-DEPEND=">=dev-libs/boost-1.41.0-r3"
-RDEPEND="${DEPEND}"
-
-DOCS=( "${DISTDIR}/VAAL_manual.doc" )
-
-src_prepare() {
- sed \
- -e '/COPYING/d' \
- -i src/Makefile.am || die
-
- sed \
- -e 's:-ggdb::g' \
- -e '/AC_OPENMP_CEHCK/d' \
- -i configure.ac || die
- autotools-utils_src_prepare
-}
-
-src_configure(){
- local myeconfargs=( $(use_enable openmp) )
- autotools-utils_src_configure
-}