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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2012-01-02 22:13:24 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2012-01-02 22:13:24 +0000 |
| commit | ebca70b91f94b1b4d448f0fcf2a460c15fd515f6 (patch) | |
| tree | 9b96291bd6f4b85b903cdacca57f76226d6f7a3b /sci-biology | |
| parent | Moved to EAPI=4, handle static-libs correctly (diff) | |
| download | gentoo-2-ebca70b91f94b1b4d448f0fcf2a460c15fd515f6.tar.gz gentoo-2-ebca70b91f94b1b4d448f0fcf2a460c15fd515f6.tar.bz2 gentoo-2-ebca70b91f94b1b4d448f0fcf2a460c15fd515f6.zip | |
Version bump
(Portage version: 2.2.0_alpha74/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/bedtools/ChangeLog | 9 | ||||
| -rw-r--r-- | sci-biology/bedtools/bedtools-2.15.0.ebuild | 33 |
2 files changed, 40 insertions, 2 deletions
diff --git a/sci-biology/bedtools/ChangeLog b/sci-biology/bedtools/ChangeLog index dbf5b6263ac9..a6c655ef86dd 100644 --- a/sci-biology/bedtools/ChangeLog +++ b/sci-biology/bedtools/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/bedtools -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v 1.1 2011/10/09 04:01:53 weaver Exp $ +# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v 1.2 2012/01/02 22:13:24 weaver Exp $ + +*bedtools-2.15.0 (02 Jan 2012) + + 02 Jan 2012; Andrey Kislyuk <weaver@gentoo.org> +bedtools-2.15.0.ebuild: + Version bump *bedtools-2.13.3 (09 Oct 2011) diff --git a/sci-biology/bedtools/bedtools-2.15.0.ebuild b/sci-biology/bedtools/bedtools-2.15.0.ebuild new file mode 100644 index 000000000000..69f825cbe108 --- /dev/null +++ b/sci-biology/bedtools/bedtools-2.15.0.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/bedtools-2.15.0.ebuild,v 1.1 2012/01/02 22:13:24 weaver Exp $ + +EAPI=4 + +inherit flag-o-matic + +DESCRIPTION="Tools for manipulation and analysis of BED, GFF/GTF, VCF, and SAM/BAM file formats" +HOMEPAGE="http://code.google.com/p/bedtools/" +SRC_URI="http://bedtools.googlecode.com/files/BEDTools.v${PV}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~x86 ~amd64" +IUSE="" + +S="${WORKDIR}/BEDTools-Version-${PV}" + +src_prepare() { + filter-ldflags -Wl,--as-needed + sed -i \ + -e '/export CXXFLAGS/ d' \ + -e '/export CXX/ d' \ + Makefile || die +} + +src_install() { + dobin bin/* + dodoc README* RELEASE_HISTORY + insinto /usr/share/${PN} + doins -r genomes +} |