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authorMarkus Dittrich <markusle@gentoo.org>2006-03-23 15:02:36 +0000
committerMarkus Dittrich <markusle@gentoo.org>2006-03-23 15:02:36 +0000
commit7af9ca27e135e11450be58429659c964e7763ee5 (patch)
tree314f7c9f9bfe658dc84b080885cfa2f636074ee2 /sci-chemistry/gamess
parentfirebird was already use-masked, just add explanatory comment (diff)
downloadgentoo-2-7af9ca27e135e11450be58429659c964e7763ee5.tar.gz
gentoo-2-7af9ca27e135e11450be58429659c964e7763ee5.tar.bz2
gentoo-2-7af9ca27e135e11450be58429659c964e7763ee5.zip
Version bump and changed the ebuild naming convention to start with the year since otherwise portage can't properly keep track of updates. Also removed obsolete ebuilds/patches.
(Portage version: 2.1_pre6-r5)
Diffstat (limited to 'sci-chemistry/gamess')
-rw-r--r--sci-chemistry/gamess/ChangeLog15
-rw-r--r--sci-chemistry/gamess/Manifest45
-rw-r--r--sci-chemistry/gamess/files/comp-gentoo.1.patch42
-rw-r--r--sci-chemistry/gamess/files/comp-lked-20060222.2.patch106
-rw-r--r--sci-chemistry/gamess/files/digest-gamess-05272005.31
-rw-r--r--sci-chemistry/gamess/files/digest-gamess-05272005.3-r11
-rw-r--r--sci-chemistry/gamess/files/digest-gamess-05272005.3-r21
-rw-r--r--sci-chemistry/gamess/files/digest-gamess-20060222.23
-rw-r--r--sci-chemistry/gamess/files/runall-gentoo.patch22
-rw-r--r--sci-chemistry/gamess/files/rungms-runall-20060222.2.patch (renamed from sci-chemistry/gamess/files/rungms-gentoo.patch)19
-rw-r--r--sci-chemistry/gamess/gamess-05272005.3-r2.ebuild223
-rw-r--r--sci-chemistry/gamess/gamess-05272005.3.ebuild233
-rw-r--r--sci-chemistry/gamess/gamess-20060222.2.ebuild (renamed from sci-chemistry/gamess/gamess-05272005.3-r1.ebuild)86
13 files changed, 208 insertions, 589 deletions
diff --git a/sci-chemistry/gamess/ChangeLog b/sci-chemistry/gamess/ChangeLog
index c182a202bc9d..1e6c1467009f 100644
--- a/sci-chemistry/gamess/ChangeLog
+++ b/sci-chemistry/gamess/ChangeLog
@@ -1,6 +1,19 @@
# ChangeLog for sci-chemistry/gamess
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gamess/ChangeLog,v 1.8 2006/02/08 21:54:55 markusle Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gamess/ChangeLog,v 1.9 2006/03/23 15:02:36 markusle Exp $
+
+*gamess-20060222.2 (22 Mar 2006)
+
+ 22 Mar 2006; Markus Dittrich <markusle@gentoo.org>
+ +files/comp-lked-20060222.2.patch, +files/rungms-runall-20060222.2.patch,
+ -files/comp-gentoo.1.patch, -files/runall-gentoo.patch,
+ -files/rungms-gentoo.patch, -gamess-05272005.3.ebuild,
+ -gamess-05272005.3-r1.ebuild, -gamess-05272005.3-r2.ebuild,
+ +gamess-20060222.2.ebuild:
+ Version bump and changed the ebuild naming convention to start with
+ the year since otherwise portage can't properly keep track of
+ updates. Also removed obsolete ebuilds/patches. gcc-4.1 currently
+ generates bad binaries even with very conservative compile flags.
08 Feb 2006; Markus Dittrich <markusle@gentoo.org>
gamess-05272005.5.ebuild:
diff --git a/sci-chemistry/gamess/Manifest b/sci-chemistry/gamess/Manifest
index 042f8f11144b..ec8bd43d53b4 100644
--- a/sci-chemistry/gamess/Manifest
+++ b/sci-chemistry/gamess/Manifest
@@ -1,12 +1,12 @@
-MD5 60955244168b45fa59826f8aa85b6aec ChangeLog 2187
-RMD160 e391e1d19a8eb3e3df6dffecc9a919d2460ae638 ChangeLog 2187
-SHA256 65eed1754f87721885ec105f1bc8ac8c35227576f8ec5a684722c6cbf7a4f352 ChangeLog 2187
-MD5 5b5d5d5d530d675c1f8fea3e2bda27c6 files/comp-gentoo.1.patch 1376
-RMD160 6f78c033069b1d848d3ee501b9282fb5f8610d2b files/comp-gentoo.1.patch 1376
-SHA256 0b067b1ab0a82df79576630b0cf0f418b78e06040004a095dc11a282941a5fd9 files/comp-gentoo.1.patch 1376
+MD5 1be8f4642944290bdd165a0db6ebf3ef ChangeLog 2829
+RMD160 b11c994940c3eb0db6cdba1c2b479cd89f41b95d ChangeLog 2829
+SHA256 db41e1768bb80416f557c36421d2aef5205197352336acbf1721591bd7ece282 ChangeLog 2829
MD5 cc629344d268783ea8be555bd06249af files/comp-gentoo.patch 1276
RMD160 2c7017ceb0138dd192a1a72cf90dcff68f9a69b8 files/comp-gentoo.patch 1276
SHA256 eb2cb647d2e48ed173cbebc24582d33743833a9345b1472ec2f6b6d28b592a0f files/comp-gentoo.patch 1276
+MD5 f35051be79ba967ce07ad02fcbcbccb1 files/comp-lked-20060222.2.patch 3547
+RMD160 a8b1a0a2e671ded8ea6dc72880c6858822cb88f2 files/comp-lked-20060222.2.patch 3547
+SHA256 1cca96ac59a1756f25c90efae67bfa00606dbfb97722054ba322b0e66d0c0206 files/comp-lked-20060222.2.patch 3547
MD5 88aa0ef3a19289c609a5167e2176bbf6 files/compall-gentoo.patch 445
RMD160 0a50c20d0aade7a0bb39f973dd76792a6a01caa2 files/compall-gentoo.patch 445
SHA256 793e9b7047d1dfd5839a1d6b980c5bcc79477dd52bd1ca1034d1ef2949428beb files/compall-gentoo.patch 445
@@ -16,45 +16,30 @@ SHA256 03afb475f2b6a164e4b6bac1192d5a71eef1586435a1e684e5c19ada81354e54 files/co
MD5 7635651c5b13ead41c16d56094238fcb files/ddi-use-ssh-gentoo.patch 518
RMD160 af1da3efe8341e437e4c98cd0aff7a892dce7241 files/ddi-use-ssh-gentoo.patch 518
SHA256 e283de0eab10c2e3aecc10f6b6a760b4b7c9aec71c07c728929ca82a83459ccd files/ddi-use-ssh-gentoo.patch 518
-MD5 51d32e48137f8f59ff14cd870cbc70b2 files/digest-gamess-05272005.3 70
-RMD160 c60b8ba044942f3d67ae9bdbad2258945bb080b5 files/digest-gamess-05272005.3 70
-SHA256 c0bae935e385dda2ba3eced5dba876825f1e0fba411800ea25880b4358d78e73 files/digest-gamess-05272005.3 70
-MD5 51d32e48137f8f59ff14cd870cbc70b2 files/digest-gamess-05272005.3-r1 70
-RMD160 c60b8ba044942f3d67ae9bdbad2258945bb080b5 files/digest-gamess-05272005.3-r1 70
-SHA256 c0bae935e385dda2ba3eced5dba876825f1e0fba411800ea25880b4358d78e73 files/digest-gamess-05272005.3-r1 70
-MD5 51d32e48137f8f59ff14cd870cbc70b2 files/digest-gamess-05272005.3-r2 70
-RMD160 c60b8ba044942f3d67ae9bdbad2258945bb080b5 files/digest-gamess-05272005.3-r2 70
-SHA256 c0bae935e385dda2ba3eced5dba876825f1e0fba411800ea25880b4358d78e73 files/digest-gamess-05272005.3-r2 70
MD5 051b8ba59df924443b9fc3199a5f3c31 files/digest-gamess-05272005.5 256
RMD160 eeeb8614a13db1b299771e76e0a523fa814ae513 files/digest-gamess-05272005.5 256
SHA256 693e3546980d917b1fb02c9c17519d176c1df8ede1381e475272574b8b2835b1 files/digest-gamess-05272005.5 256
+MD5 48cee4f6d91822b3ecd488c91faa8edc files/digest-gamess-20060222.2 256
+RMD160 fe5736ffd391b5bbb8c2b0fd0ca1cc8f16d6289f files/digest-gamess-20060222.2 256
+SHA256 d4dfab6eb88cc38fcf5528e937579905ab4d21ed7d8e6947871d53a12e0c8b21 files/digest-gamess-20060222.2 256
MD5 d2f6837d02ac960e7bed4addf9632eec files/lked-gentoo.patch 783
RMD160 0dbf965aabc02e82bc818f2d0e55f76900ea2641 files/lked-gentoo.patch 783
SHA256 7d2f513c6413fcd25a0e8566272db72e48e08c75edcf34f4e12fc0a98fddf71d files/lked-gentoo.patch 783
MD5 e4d9a65b9c8e365bf2e4f2de8a5e1e55 files/runall-gentoo.1.patch 483
RMD160 12199477c3fa86a8f2132538f45c8cf786b863e6 files/runall-gentoo.1.patch 483
SHA256 40226df377cea8e8f43e364efed797ec22c82edf0fa92da51338315d583ea4e2 files/runall-gentoo.1.patch 483
-MD5 bfc4049f6e2546889b161c6c9b3be72f files/runall-gentoo.patch 688
-RMD160 b7c085cfa66ea34b0781ce3512b838f573d2bb66 files/runall-gentoo.patch 688
-SHA256 f6b469a3965dc6c060c1473e7ddc519feff66e5da372373e4bbdc4a03c2d7623 files/runall-gentoo.patch 688
MD5 549e3fee1dda6f731af6c5da281e5fd7 files/rungms-gentoo.1.patch 1804
RMD160 d800937c118bac2dc93390a666db548d26f4273f files/rungms-gentoo.1.patch 1804
SHA256 0defb144336b97b5cf816a80e509133b74f55c75a909884f25296663f377a486 files/rungms-gentoo.1.patch 1804
-MD5 b071fb871be1c8b9bc57bcd160dc6fd9 files/rungms-gentoo.patch 1801
-RMD160 f31d8baa48e5dbde2018fb4e0ae9c994574a43c6 files/rungms-gentoo.patch 1801
-SHA256 07a98d4218d2b264f94325c43173d3c2f64a51a80282f6694892999cbe4fc334 files/rungms-gentoo.patch 1801
-MD5 2e42d76c41b4338282fe7e1b5cfd3093 gamess-05272005.3-r1.ebuild 6664
-RMD160 dfb5a9315a7f033db3c4bfebb18d27e83ff6b02b gamess-05272005.3-r1.ebuild 6664
-SHA256 ac0b3c61205751a3da74ba3921b978f0c7a4bf69c06cf5623d5d50f07f589a54 gamess-05272005.3-r1.ebuild 6664
-MD5 189d64d4b2256ad8e759f5266216254c gamess-05272005.3-r2.ebuild 6664
-RMD160 acef606acd37f5b4b499f76c63e0b730394974c7 gamess-05272005.3-r2.ebuild 6664
-SHA256 825d0d5953bb9d74e582d8dbc83b4602ebdcff5a5c55d2753f4f9eddca9c1396 gamess-05272005.3-r2.ebuild 6664
-MD5 81efef3dd25f618ec470f589743f1882 gamess-05272005.3.ebuild 7057
-RMD160 dc358050936540dc528f46b4f962b6e77780e89d gamess-05272005.3.ebuild 7057
-SHA256 b1ea3a5d68fbf78c0eebe2b4aa1a5bf2788e48d7f189551a6de1abe3b78cf51d gamess-05272005.3.ebuild 7057
+MD5 8088ad360fe8b034b5b36deeac7a9a3b files/rungms-runall-20060222.2.patch 2293
+RMD160 22b884e347d08a2041006a7789a7e9daf3d83483 files/rungms-runall-20060222.2.patch 2293
+SHA256 6b995a78ca1b74e2936f553e8cc286303211d040c9f35a8c540f4b8ce88ae331 files/rungms-runall-20060222.2.patch 2293
MD5 a3224ac9b7286b0112ec036a9af4d1b4 gamess-05272005.5.ebuild 7371
RMD160 9c688c70e83dad7cd700e4f3f66eb5c00a0877ee gamess-05272005.5.ebuild 7371
SHA256 473c823cef96e5ff595b266421637f546e07cd6ee4c1f7960fda62c47d4788ab gamess-05272005.5.ebuild 7371
+MD5 51cc3bcc365417e0ad6f05b56c8cb51f gamess-20060222.2.ebuild 7349
+RMD160 a04728ef99eff80935b8b5773ca65b7709856016 gamess-20060222.2.ebuild 7349
+SHA256 6fe773057329357d1778dabc4d163ad20b71b0c27236e848ad4f4b96e06f54eb gamess-20060222.2.ebuild 7349
MD5 041650a939ada57b9df1755a488ad1b7 metadata.xml 254
RMD160 991c43f74018cbcaaa60b41290c912a8b61091c8 metadata.xml 254
SHA256 80784c7acbd54102b4d3fc01c3fb2ae5862732093798671596c67a8350c25454 metadata.xml 254
diff --git a/sci-chemistry/gamess/files/comp-gentoo.1.patch b/sci-chemistry/gamess/files/comp-gentoo.1.patch
deleted file mode 100644
index bed62dd1ebb8..000000000000
--- a/sci-chemistry/gamess/files/comp-gentoo.1.patch
+++ /dev/null
@@ -1,42 +0,0 @@
---- gamess/comp 2005-11-14 15:44:06.000000000 +0000
-+++ gamess-patched/comp 2005-12-07 03:08:59.000000000 +0000
-@@ -11,8 +11,8 @@
- # linux-ia64,linux-pc,mac32,macG5,necsx,sgi32,sgi64,sun32,sun64
- # 2. Choose your GAMESS directory tree.
- #
--set TARGET=ibm64
--chdir /u1/mike/gamess
-+set TARGET=linux-pc
-+#chdir /u1/mike/gamess
- #
- # ---- and now the script begins...
- #
-@@ -1015,11 +1015,12 @@
- # Pentium II fractionally). None of these optimizations are used below.
- #
- if ($TARGET == linux-pc) then
-- set OPT = '-O2'
-+ set gentoo-OPT = '-O2'
- if ($MODULE == ormas1) set OPT='-O2 -fno-move-all-movables' # RH9, g77 3.3
- #
- # g77 does not support FORTRAN logical units above 99, or 128 bit math.
- #
-+ if ($MODULE == zheev) set OPT='-O1'
- if (($MODULE == qeigen) || ($MODULE == int2c)) then
- mv $MODULE.f $MODULE.junk
- sed -e "s/Q-/D-/g" \
-@@ -1027,13 +1028,8 @@
- -e "s/REAL\*16/DOUBLE PRECISION/" $MODULE.junk > $MODULE.f
- rm -f $MODULE.junk
- endif
-- if (($MODULE == iolib) || ($MODULE == inputa)) then
-- mv $MODULE.f $MODULE.junk
-- sed -e "s/MXUNIT=299/MXUNIT=99/g" $MODULE.junk > $MODULE.f
-- rm -f $MODULE.junk
-- endif
- set echo
-- g77 -c $OPT -malign-double -fautomatic \
-+ gentoo-g77 -c $OPT -malign-double -fautomatic \
- -Wno-globals -fno-globals $MODULE.f
- unset echo
- endif
diff --git a/sci-chemistry/gamess/files/comp-lked-20060222.2.patch b/sci-chemistry/gamess/files/comp-lked-20060222.2.patch
new file mode 100644
index 000000000000..47e2bb016e4d
--- /dev/null
+++ b/sci-chemistry/gamess/files/comp-lked-20060222.2.patch
@@ -0,0 +1,106 @@
+diff -Naur gamess-old/comp gamess/comp
+--- gamess-old/comp 2006-03-13 16:09:11.000000000 -0600
++++ gamess/comp 2006-03-21 22:26:13.000000000 -0600
+@@ -11,8 +11,8 @@
+ # linux-ia64,linux-pc,mac32,macG5,necsx,sgi32,sgi64,sun32,sun64
+ # 2. Choose your GAMESS directory tree.
+ #
+-set TARGET=ibm64
+-chdir /u1/mike/gamess
++set TARGET=linux-pc
++#chdir /u1/mike/gamess
+ #
+ # ---- and now the script begins...
+ #
+@@ -1056,9 +1056,9 @@
+ # Pentium II fractionally). None of these optimizations are used below.
+ #
+ if ($TARGET == linux-pc) then
+- set OPT = '-O2'
++ set gentoo-OPT = '-O2'
+ if ($MODULE == ormas1) set OPT='-O2 -fno-move-all-movables' # RH9, g77 3.3
+- if ($MODULE == zheev) set OPT='-O0' # defensive compiling, for exam19
++ if ($MODULE == zheev) set OPT='-O0 -w' # defensive compiling, for exam19
+ #
+ # g77 does not support FORTRAN logical units above 99, or 128 bit math.
+ #
+@@ -1069,13 +1069,8 @@
+ -e "s/REAL\*16/DOUBLE PRECISION/" $MODULE.junk > $MODULE.f
+ rm -f $MODULE.junk
+ endif
+- if (($MODULE == iolib) || ($MODULE == inputa)) then
+- mv $MODULE.f $MODULE.junk
+- sed -e "s/MXUNIT=299/MXUNIT=99/g" $MODULE.junk > $MODULE.f
+- rm -f $MODULE.junk
+- endif
+ set echo
+- g77 -c $OPT -malign-double -fautomatic \
++ gentoo-g77 -c $OPT -malign-double -fautomatic \
+ -Wno-globals -fno-globals $MODULE.f
+ unset echo
+ endif
+diff -Naur gamess-old/compall gamess/compall
+--- gamess-old/compall 2006-03-14 12:16:22.000000000 -0600
++++ gamess/compall 2006-03-21 22:28:04.000000000 -0600
+@@ -12,8 +12,8 @@
+ # linux-ia64,linux-pc,mac32,macG5,necsx,sgi32,sgi64,sun32,sun64
+ # 2. Choose your GAMESS directory tree.
+ #
+-set TARGET=ibm64
+-chdir /u1/mike/gamess
++set TARGET=linux-pc
++#chdir /u1/mike/gamess
+ #
+ # ----- and now the script begins...
+ #
+diff -Naur gamess-old/ddi/compddi gamess/ddi/compddi
+--- gamess-old/ddi/compddi 2006-03-14 12:05:11.000000000 -0600
++++ gamess/ddi/compddi 2006-03-21 22:29:02.000000000 -0600
+@@ -14,7 +14,7 @@
+ # fuji-pp32,fuji-pp64,hpux32,hpux64,ibm32,ibm64,ibm64-sp,ibm-bg,
+ # linux-ia64,linux-pc,mac32,macG5,necsx,sgi32,sgi64,sun32,sun64
+ #
+- set TARGET = ibm64
++ set TARGET = linux-pc
+
+ # 2. Choose DDI communication layer, the only legal values are
+ # sockets,mpi,shmem,lapi
+@@ -500,11 +500,11 @@
+ # select only one rather than two trailing underscores below.
+ if($TARGET == linux-pc) then
+
+- set CC = 'gcc'
++ set gentoo-CC = 'gcc'
+ set CFLAGS = "-DLINUX -O3 -m32 -fstrict-aliasing -I./include"
+ set CLIBS = "-lpthread"
+
+- set F77_OPTS = '-DINT_SIZE=int -D_UNDERSCORES=2'
++ set gentoo-F77_OPTS = '-DINT_SIZE=int -D_UNDERSCORES=2'
+
+ set AR_FLAGS = 'cr'
+ set RANLIB_FLAGS = ' '
+diff -Naur gamess-old/lked gamess/lked
+--- gamess-old/lked 2006-03-13 16:07:51.000000000 -0600
++++ gamess/lked 2006-03-21 22:29:57.000000000 -0600
+@@ -14,8 +14,8 @@
+ # linux-ia64,linux-pc,mac32,macG5,necsx,sgi32,sgi64,sun32,sun64
+ # 2. Choose your GAMESS directory tree.
+ #
+-set TARGET=ibm64
+-chdir /u1/mike/gamess
++set TARGET=linux-pc
++#chdir /u1/mike/gamess
+ #
+ # ---- and now the script begins...
+ #
+@@ -364,8 +364,8 @@
+ # about matching the number of trailing underscores.
+ #
+ if ($TARGET == linux-pc) then
+- set LDR='g77'
+- set LDOPTS=' ' # add '-Wl,-M' to see load map
++ set gentoo-LDR='g77'
++ set gentoo-LDOPTS=' ' # add '-Wl,-M' to see load map
+ if (-e /usr/lib/libblas.a) then
+ set LIBRARIES='-lblas'
+ set BLAS=' '
diff --git a/sci-chemistry/gamess/files/digest-gamess-05272005.3 b/sci-chemistry/gamess/files/digest-gamess-05272005.3
deleted file mode 100644
index fe86e56c2ef2..000000000000
--- a/sci-chemistry/gamess/files/digest-gamess-05272005.3
+++ /dev/null
@@ -1 +0,0 @@
-MD5 1478f6223f5096d00552806f2a98fd9e gamess-05272005.3.tar.gz 6339705
diff --git a/sci-chemistry/gamess/files/digest-gamess-05272005.3-r1 b/sci-chemistry/gamess/files/digest-gamess-05272005.3-r1
deleted file mode 100644
index fe86e56c2ef2..000000000000
--- a/sci-chemistry/gamess/files/digest-gamess-05272005.3-r1
+++ /dev/null
@@ -1 +0,0 @@
-MD5 1478f6223f5096d00552806f2a98fd9e gamess-05272005.3.tar.gz 6339705
diff --git a/sci-chemistry/gamess/files/digest-gamess-05272005.3-r2 b/sci-chemistry/gamess/files/digest-gamess-05272005.3-r2
deleted file mode 100644
index fe86e56c2ef2..000000000000
--- a/sci-chemistry/gamess/files/digest-gamess-05272005.3-r2
+++ /dev/null
@@ -1 +0,0 @@
-MD5 1478f6223f5096d00552806f2a98fd9e gamess-05272005.3.tar.gz 6339705
diff --git a/sci-chemistry/gamess/files/digest-gamess-20060222.2 b/sci-chemistry/gamess/files/digest-gamess-20060222.2
new file mode 100644
index 000000000000..6880ae0f9c7e
--- /dev/null
+++ b/sci-chemistry/gamess/files/digest-gamess-20060222.2
@@ -0,0 +1,3 @@
+MD5 d488b090c8b5001c5c22a06f4fe06997 gamess-20060222.2.tar.gz 6438153
+RMD160 e833f0562591ac1bc56b88653012733e63025b6f gamess-20060222.2.tar.gz 6438153
+SHA256 480c21c3c684fe384cb6612438b9e2112588ce7518a3fe1c82643e8a69edc304 gamess-20060222.2.tar.gz 6438153
diff --git a/sci-chemistry/gamess/files/runall-gentoo.patch b/sci-chemistry/gamess/files/runall-gentoo.patch
deleted file mode 100644
index 8ad9535cd4bb..000000000000
--- a/sci-chemistry/gamess/files/runall-gentoo.patch
+++ /dev/null
@@ -1,22 +0,0 @@
-# patch to adjust paths in runall script according to our GENTOO
-# install
-
---- gamess/runall 2005-07-05 14:08:04.000000000 +0000
-+++ gamess-gentoo/runall 2005-09-05 11:05:31.000000000 +0000
-@@ -10,7 +10,7 @@
- # Edit this file to set the base path to GAMESS, and execute it to be
- # sure all the jobs TERMINATED NORMALLY, and got correct numbers too.
- #
--chdir /u1/mike/gamess
-+#chdir /u1/mike/gamess/
- set VERNO=00
- #
- foreach NUM ( 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 \
-@@ -20,6 +20,6 @@
- gms -v $VERNO -q ti -l exam$NUM.log exam$NUM
- sleep 5
- else
-- rungms exam$NUM $VERNO 1 >& exam$NUM.log
-+ ./rungms exam$NUM $VERNO 1 >& exam$NUM.log
- endif
- end
diff --git a/sci-chemistry/gamess/files/rungms-gentoo.patch b/sci-chemistry/gamess/files/rungms-runall-20060222.2.patch
index 1c53445dce8e..29b0739c7b1d 100644
--- a/sci-chemistry/gamess/files/rungms-gentoo.patch
+++ b/sci-chemistry/gamess/files/rungms-runall-20060222.2.patch
@@ -1,11 +1,24 @@
---- gamess/rungms 2005-11-10 22:03:42.000000000 +0000
-+++ gamess-new//rungms 2005-12-02 18:47:25.000000000 +0000
+diff -Naur gamess-old/runall gamess/runall
+--- gamess-old/runall 2006-03-09 16:36:21.000000000 -0600
++++ gamess/runall 2006-03-21 22:32:27.000000000 -0600
+@@ -10,7 +10,7 @@
+ # Edit this file to set the base path to GAMESS, and execute it to be
+ # sure all the jobs TERMINATED NORMALLY, and got correct numbers too.
+ #
+-chdir /u1/mike/gamess
++#chdir /u1/mike/gamess/
+ set VERNO=00
+ #
+ foreach NUM ( 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 \
+diff -Naur gamess-old/rungms gamess/rungms
+--- gamess-old/rungms 2005-12-28 15:31:05.000000000 -0600
++++ gamess/rungms 2006-03-21 22:33:07.000000000 -0600
@@ -54,7 +54,7 @@
# of using LoadLeveler via a "llgms" front end in ~/gamess/misc.
#
set TARGET=sockets
-set SCR=/scr/$USER
-+set SCR=./
++set SCR=`pwd`
#
set JOB=$1 # name of the input file xxx.inp, give only the xxx part
set VERNO=$2 # revision number of the executable created by 'lked' step
diff --git a/sci-chemistry/gamess/gamess-05272005.3-r2.ebuild b/sci-chemistry/gamess/gamess-05272005.3-r2.ebuild
deleted file mode 100644
index 7968dabc6ccb..000000000000
--- a/sci-chemistry/gamess/gamess-05272005.3-r2.ebuild
+++ /dev/null
@@ -1,223 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gamess/gamess-05272005.3-r2.ebuild,v 1.1 2005/12/07 15:01:23 markusle Exp $
-
-inherit eutils toolchain-funcs fortran
-
-DESCRIPTION="A powerful quantum chemistry package"
-LICENSE="gamess"
-HOMEPAGE="http://www.msg.ameslab.gov/GAMESS/GAMESS.html"
-SRC_URI="${P}.tar.gz"
-
-SLOT="0"
-KEYWORDS="~x86"
-IUSE="ifc hardened blas"
-
-RESTRICT="fetch"
-
-DEPEND="app-shells/tcsh
- ifc? ( >=dev-lang/ifc-8.1 )
- hardened? ( sys-apps/paxctl )
- blas? ( virtual/blas )"
-
-RDEPEND="app-shells/tcsh
- net-misc/openssh
- ifc? ( >=dev-lang/ifc-8.1 )"
-
-S="${WORKDIR}/${PN}"
-
-GAMESS_DOWNLOAD="http://www.msg.ameslab.gov/GAMESS/License_Agreement.html"
-GAMESS_VERSION="27 JUN 2005 (R3)"
-
-
-pkg_nofetch() {
- echo
- einfo "Please download ${PN}-current.tar.gz from"
- einfo "${GAMESS_DOWNLOAD}."
- einfo "Be sure to select the version ${GAMESS_VERSION} tarball!!"
- einfo "Then move the tarball to"
- einfo "${DISTDIR}/${P}.tar.gz"
- echo
-}
-
-pkg_setup() {
- # make sure we have the proper fortan compiler;
- # use ifc for USE="ifc" and g77 otherwise
- if use ifc; then
- need_fortran ifc
- else
- need_fortran g77
- fi
-
- # blas and ifc don't go together
- if use blas && use ifc; then
- die "${PN} can not be compiled with USE=blas and USE=ifc"
- fi
-}
-
-src_unpack() {
- unpack ${A}
-
- # apply LINUX-arch patches to gamess makesfiles
- epatch "${FILESDIR}"/comp-gentoo.1.patch
- epatch "${FILESDIR}"/compall-gentoo.patch
- epatch "${FILESDIR}"/lked-gentoo.patch
- epatch "${FILESDIR}"/ddi-use-ssh-gentoo.patch
- epatch "${FILESDIR}"/compddi-gentoo.patch
- epatch "${FILESDIR}"/rungms-gentoo.1.patch
- epatch "${FILESDIR}"/runall-gentoo.1.patch
-
- # for hardened-gcc let't turn off ssp, since it breakes
- # a few routines
- cd "${S}"
- if use hardened && [[ $(tc-getF77) = f77 ]]; then
- FFLAGS="${FFLAGS} -fno-stack-protector-all"
- fi
-
- # greate proper activate sourcefile
- cp "./tools/actvte.code" "./tools/actvte.f" || \
- die || "Failed to create actvte.f"
- sed -e "s/^\*UNX/ /" -i "./tools/actvte.f" || \
- die || "Failed to perform UNX substitutions in actvte.f"
-
- # fix GAMESS' compall script to use proper CC
- sed -e "s|\$CCOMP -c \$extraflags source/zunix.c|$(tc-getCC) -c \$extraflags source/zunix.c|" \
- -i compall || die "Failed setting up compall script"
-
- # insert proper FFLAGS into GAMESS' comp makefile
- # in case we're using ifc let's strip all the gcc
- # specific stuff
- if use ifc; then
- sed -e "s/-malign-double -fautomatic /-cm -w \$MODULE.f/" \
- -e "s/-Wno-globals -fno-globals \$MODULE.f//" \
- -e "s/gentoo-OPT = '-O2'/OPT = '${FFLAGS} -quiet'/" \
- -e "s/gentoo-g77/$(tc-getF77)/" \
- -i comp || die "Failed setting up comp script"
- else
- sed -e "s/gentoo-OPT = '-O2'/OPT = '${FFLAGS}'/" \
- -e "s/gentoo-g77/$(tc-getF77)/" \
- -i comp || die "Failed setting up comp script"
- fi
-
- # use proper blas
- if ! use blas; then
- sed -e "s|/usr/lib/libblas.a|/usr/lib/dontuselibblas.a|" \
- -i lked || die "Failed to adjust blas in lked"
- fi
-
- # fix up GAMESS' linker script;
- if use ifc; then
- sed -e "s/gentoo-LDR='g77'/LDR='$(tc-getF77)'/" \
- -e "s/gentoo-LDOPTS=' '/LDOPTS='${LDFLAGS}'/" \
- -i lked || die "Failed setting up lked script"
- else
- sed -e "s/gentoo-LDR='g77'/LDR='$(tc-getF77)'/" \
- -e "s/gentoo-LDOPTS=' '/LDOPTS='${LDFLAGS}'/" \
- -i lked || die "Failed patching lked script"
- fi
-
- # fix up GAMESS' ddi TCP/IP socket build
- sed -e "s/gentoo-CC = 'gcc'/CC = '$(tc-getCC)'/" \
- -i ddi/compddi || die "Failed setting up compddi script"
-
- # for ifc we have to fix the number of underscores of fortran
- # symbols, otherwise the linker will barf
- if use ifc; then
- sed -e "s/gentoo-F77_OPTS = '-DINT_SIZE=int -D_UNDERSCORES=2/F77_OPTS = '-DINT_SIZE=int -D_UNDERSCORES=1/" \
- -i ddi/compddi || die "Failed fixing underscores in compddi"
- else
- sed -e "s/gentoo-F77_OPTS/F77_OPTS/" \
- -i ddi/compddi || die "Failed fixing underscores in compddi"
- fi
-}
-
-src_compile() {
- # build actvte
- cd "${S}"/tools
- $(tc-getF77) -o actvte.x actvte.f || die "Failed to compile actvte.x"
-
- # for hardened (PAX) users and ifc we need to turn
- # MPROTECT off
- if use ifc && use hardened; then
- /sbin/paxctl -PemRxS actvte.x 2> /dev/null || \
- die "paxctl failed on actvte.x"
- fi
-
- # build gamess
- cd "${S}"
- ./compall || die "compall failed"
-
- # build the ddi TCP/IP socket stuff
- cd ${S}/"ddi"
- ./compddi || die "compddi failed"
-
- # finally, link it all together
- cd "${S}"
- ./lked || die "lked failed"
-
- # for hardened (PAX) users and ifc we need to turn
- # MPROTECT off
- if use ifc && use hardened; then
- /sbin/paxctl -PemRxS ${PN}.00.x 2> /dev/null || \
- die "paxctl failed on actvte.x"
- fi
-}
-
-src_install() {
- cd "${S}"
-
- # the executables
- dobin ${PN}.00.x ddi/ddikick.x rungms \
- || die "Failed installing binaries"
-
- # the docs
- dodoc *.DOC || die "Failed installing docs"
-
- # install ericftm
- insinto /usr/share/${PN}/ericfmt
- doins ericfmt.dat || die "Failed installing ericfmt.dat"
-
- # install mcpdata
- insinto /usr/share/${PN}/mcpdata
- doins mcpdata/* || die "Failed installing mcpdata"
-
- # install the tests the user should run, and
- # fix up the runscript; also grab a copy of rungms
- # so the user is ready to run the tests
- insinto /usr/share/${PN}/tests
- insopts -m0644
- doins tests/* || die "Failed installing tests"
- insopts -m0744
- doins runall || die "Failed installing tests"
-}
-
-pkg_postinst() {
- echo
- ewarn "Before you use GAMESS for any serious work you HAVE"
- ewarn "to run the supplied test files located in"
- ewarn "/usr/share/gamess/tests and check them thoroughly."
- ewarn "Otherwise all scientific publications resulting from"
- ewarn "your GAMESS runs should be immediately rejected :)"
- ewarn "To do so copy the content of /usr/share/gamess/tests"
- ewarn "to some temporary location and execute './runall'. "
- ewarn "Please consult TEST.DOC and the other docs!"
- ewarn "If exam39 fails or you have problems with the TDHF"
- ewarn "code due to bad file unit numbers you will have to"
- ewarn "re-emerge and re-compile gcc. Please refer to"
- ewarn "bug #114367 regarding this issue!"
-
- if use ifc; then
- echo
- ewarn "IMPORTANT NOTE: We STRONGLY recommend to stay away"
- ewarn "from ifc-9.0 for now and use the ifc-8.1 series of"
- ewarn "compilers UNLESS you can run through ALL of the "
- ewarn "test cases (see above) successfully."
- fi
-
- echo
- einfo "If you want to run on more than a single CPU"
- einfo "you will have to acquaint yourself with the way GAMESS"
- einfo "does multiprocessor runs and adjust rungms according to"
- einfo "your target network architecture."
- echo
-}
diff --git a/sci-chemistry/gamess/gamess-05272005.3.ebuild b/sci-chemistry/gamess/gamess-05272005.3.ebuild
deleted file mode 100644
index b81f96a34e95..000000000000
--- a/sci-chemistry/gamess/gamess-05272005.3.ebuild
+++ /dev/null
@@ -1,233 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gamess/gamess-05272005.3.ebuild,v 1.1 2005/12/03 18:26:15 markusle Exp $
-
-inherit eutils toolchain-funcs fortran
-
-DESCRIPTION="A powerful quantum chemistry package"
-LICENSE="gamess"
-HOMEPAGE="http://www.msg.ameslab.gov/GAMESS/GAMESS.html"
-SRC_URI="${P}.tar.gz"
-
-SLOT="0"
-KEYWORDS="~x86"
-IUSE="ifc hardened blas"
-
-RESTRICT="fetch"
-
-DEPEND="app-shells/tcsh
- ifc? ( >=dev-lang/ifc-8.1 )
- hardened? ( sys-apps/paxctl )
- blas? ( virtual/blas )"
-
-RDEPEND="app-shells/tcsh
- net-misc/openssh
- ifc? ( >=dev-lang/ifc-8.1 )"
-
-S="${WORKDIR}/${PN}"
-
-GAMESS_DOWNLOAD="http://www.msg.ameslab.gov/GAMESS/License_Agreement.html"
-GAMESS_VERSION="27 JUN 2005 (R3)"
-
-
-pkg_nofetch() {
- echo
- einfo "Please download ${PN}-current.tar.gz from"
- einfo "${GAMESS_DOWNLOAD}."
- einfo "Be sure to select the version ${GAMESS_VERSION} tarball!!"
- einfo "Then move the tarball to"
- einfo "${DISTDIR}/${P}.tar.gz"
- echo
-}
-
-pkg_setup() {
- # make sure we have the proper fortan compiler;
- # use ifc for USE="ifc" and g77 otherwise
- if use ifc; then
- need_fortran ifc
- else
- need_fortran g77
- fi
-
- # blas and ifc don't go together
- if use blas && use ifc; then
- die "${PN} can not be compiled with USE=blas and USE=ifc"
- fi
-}
-
-src_unpack() {
- unpack ${A}
-
- # apply LINUX-arch patches to gamess makesfiles
- epatch "${FILESDIR}"/comp-gentoo.patch
- epatch "${FILESDIR}"/compall-gentoo.patch
- epatch "${FILESDIR}"/lked-gentoo.patch
- epatch "${FILESDIR}"/ddi-use-ssh-gentoo.patch
- epatch "${FILESDIR}"/compddi-gentoo.patch
- epatch "${FILESDIR}"/rungms-gentoo.patch
- epatch "${FILESDIR}"/runall-gentoo.patch
-
- # for hardened-gcc let't turn off ssp, since it breakes
- # a few routines
- cd "${S}"
- if use hardened && [[ $(tc-getF77) = f77 ]]; then
- FFLAGS="${FFLAGS} -fno-stack-protector-all"
- fi
-
- # greate proper activate sourcefile
- cp "./tools/actvte.code" "./tools/actvte.f" || \
- die || "Failed to create actvte.f"
- sed -e "s/^\*UNX/ /" -i "./tools/actvte.f" || \
- die || "Failed to perform UNX substitutions in actvte.f"
-
- # fix GAMESS' compall script to use proper CC
- sed -e "s|\$CCOMP -c \$extraflags source/zunix.c|$(tc-getCC) -c \$extraflags source/zunix.c|" \
- -i compall || die "Failed setting up compall script"
-
- # insert proper FFLAGS into GAMESS' comp makefile
- # in case we're using ifc let's strip all the gcc
- # specific stuff
- if use ifc; then
- sed -e "s/-malign-double -fautomatic /-cm -w \$MODULE.f/" \
- -e "s/-Wno-globals -fno-globals \$MODULE.f//" \
- -e "s/gentoo-OPT = '-O2'/OPT = '${FFLAGS} -quiet'/" \
- -e "s/gentoo-g77/$(tc-getF77)/" \
- -i comp || die "Failed setting up comp script"
- else
- sed -e "s/gentoo-OPT = '-O2'/OPT = '${FFLAGS}'/" \
- -e "s/gentoo-g77/$(tc-getF77)/" \
- -i comp || die "Failed setting up comp script"
- fi
-
- # use proper blas
- if ! use blas; then
- sed -e "s|/usr/lib/libblas.a|/usr/lib/dontuselibblas.a|" \
- -i lked || die "Failed to adjust blas in lked"
- fi
-
- # fix up GAMESS' linker script;
- if use ifc; then
- sed -e "s/gentoo-LDR='g77'/LDR='$(tc-getF77)'/" \
- -e "s/gentoo-LDOPTS=' '/LDOPTS='${LDFLAGS}'/" \
- -i lked || die "Failed setting up lked script"
- else
- sed -e "s/gentoo-LDR='g77'/LDR='$(tc-getF77)'/" \
- -e "s/gentoo-LDOPTS=' '/LDOPTS='${LDFLAGS}'/" \
- -i lked || die "Failed patching lked script"
- fi
-
- # fix up GAMESS' ddi TCP/IP socket build
- sed -e "s/gentoo-CC = 'gcc'/CC = '$(tc-getCC)'/" \
- -i ddi/compddi || die "Failed setting up compddi script"
-
- # for ifc we have to fix the number of underscores of fortran
- # symbols, otherwise the linker will barf
- if use ifc; then
- sed -e "s/gentoo-F77_OPTS = '-DINT_SIZE=int -D_UNDERSCORES=2/F77_OPTS = '-DINT_SIZE=int -D_UNDERSCORES=1/" \
- -i ddi/compddi || die "Failed fixing underscores in compddi"
- else
- sed -e "s/gentoo-F77_OPTS/F77_OPTS/" \
- -i ddi/compddi || die "Failed fixing underscores in compddi"
- fi
-}
-
-src_compile() {
- # build actvte
- cd "${S}"/tools
- $(tc-getF77) -o actvte.x actvte.f || die "Failed to compile actvte.x"
-
- # for hardened (PAX) users and ifc we need to turn
- # MPROTECT off
- if use ifc && use hardened; then
- /sbin/paxctl -PemRxS actvte.x 2> /dev/null || \
- die "paxctl failed on actvte.x"
- fi
-
- # build gamess
- cd "${S}"
- ./compall || die "compall failed"
-
- # build the ddi TCP/IP socket stuff
- cd ${S}/"ddi"
- ./compddi || die "compddi failed"
-
- # finally, link it all together
- cd "${S}"
- ./lked || die "lked failed"
-
- # for hardened (PAX) users and ifc we need to turn
- # MPROTECT off
- if use ifc && use hardened; then
- /sbin/paxctl -PemRxS ${PN}.00.x 2> /dev/null || \
- die "paxctl failed on actvte.x"
- fi
-}
-
-src_install() {
- cd "${S}"
-
- # the executables
- dobin ${PN}.00.x || die "Failed installing gamess executable"
- dobin ddi/ddikick.x || die "Failed installing ddikick.x"
-
- # the docs
- dodoc *.DOC || die "Failed installing docs"
-
- # install ericftm
- insinto /usr/share/${PN}/ericfmt
- doins ericfmt.dat || die "Failed installing ericfmt.dat"
-
- # install mcpdata
- insinto /usr/share/${PN}/mcpdata
- doins mcpdata/* || die "Failed installing mcpdata"
-
- # install rungms, also supply a copy for the test
- # files
- insinto /usr/share/${PN}/rungms
- insopts -m0744
- doins rungms || die "Failed installing rungms"
-
- # install the tests the user should run, and
- # fix up the runscript; also grab a copy of rungms
- # so the user is ready to run the tests
- insinto /usr/share/${PN}/tests
- insopts -m0644
- doins tests/* || die "Failed installing tests"
- insopts -m0744
- doins runall rungms || die "Failed installing tests"
-}
-
-pkg_postinst() {
- echo
- ewarn "Before you use GAMESS for any serious work you HAVE"
- ewarn "to run the supplied test files located in"
- ewarn "/usr/share/gamess/tests and check them thoroughly."
- ewarn "Otherwise all scientific publications resulting from"
- ewarn "your GAMESS runs should be immediately rejected :)"
- ewarn "To do so copy the content of /usr/share/gamess/tests"
- ewarn "to some temporary location and execute './runall'. "
- ewarn "Please consult TEST.DOC and the other docs!"
- ewarn "NOTE: Due to a g77 implementation issue the TDHF code"
- ewarn " currently does not work and exam39 will, therefore,"
- ewarn " not run properly. Please watch bug #114367 "
- ewarn " for this issue!"
-
- if use ifc; then
- echo
- ewarn "IMPORTANT NOTE: We STRONGLY recommend to stay away"
- ewarn "from ifc-9.0 for now and use the ifc-8.1 series of"
- ewarn "compilers UNLESS you can run through ALL of the "
- ewarn "test cases (see above) successfully."
- fi
-
- echo
- einfo "To perform a GAMESS run copy the the rungms script from"
- einfo "/usr/share/gamess/rungms into your local directory"
- einfo "and type ./rungms <myinputfile> >& <myoutputfile> "
- einfo
- einfo "If you want to run on more than a single CPU"
- einfo "you will have to acquaint yourself with the way GAMESS"
- einfo "does multiprocessor runs and adjust rungms according to"
- einfo "your target network architecture."
- echo
-}
diff --git a/sci-chemistry/gamess/gamess-05272005.3-r1.ebuild b/sci-chemistry/gamess/gamess-20060222.2.ebuild
index 78c956230b7a..271940eb6ee9 100644
--- a/sci-chemistry/gamess/gamess-05272005.3-r1.ebuild
+++ b/sci-chemistry/gamess/gamess-20060222.2.ebuild
@@ -1,8 +1,8 @@
-# Copyright 1999-2005 Gentoo Foundation
+# Copyright 1999-2006 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gamess/gamess-05272005.3-r1.ebuild,v 1.1 2005/12/04 17:00:50 markusle Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gamess/gamess-20060222.2.ebuild,v 1.1 2006/03/23 15:02:36 markusle Exp $
-inherit eutils toolchain-funcs fortran
+inherit eutils toolchain-funcs fortran flag-o-matic
DESCRIPTION="A powerful quantum chemistry package"
LICENSE="gamess"
@@ -27,7 +27,7 @@ RDEPEND="app-shells/tcsh
S="${WORKDIR}/${PN}"
GAMESS_DOWNLOAD="http://www.msg.ameslab.gov/GAMESS/License_Agreement.html"
-GAMESS_VERSION="27 JUN 2005 (R3)"
+GAMESS_VERSION="22 FEB 2006 (R2)"
pkg_nofetch() {
@@ -46,7 +46,7 @@ pkg_setup() {
if use ifc; then
need_fortran ifc
else
- need_fortran g77
+ need_fortran gfortran g77
fi
# blas and ifc don't go together
@@ -59,21 +59,35 @@ src_unpack() {
unpack ${A}
# apply LINUX-arch patches to gamess makesfiles
- epatch "${FILESDIR}"/comp-gentoo.patch
- epatch "${FILESDIR}"/compall-gentoo.patch
- epatch "${FILESDIR}"/lked-gentoo.patch
+ epatch "${FILESDIR}"/comp-lked-20060222.2.patch
epatch "${FILESDIR}"/ddi-use-ssh-gentoo.patch
- epatch "${FILESDIR}"/compddi-gentoo.patch
- epatch "${FILESDIR}"/rungms-gentoo.1.patch
- epatch "${FILESDIR}"/runall-gentoo.1.patch
+ epatch "${FILESDIR}"/rungms-runall-20060222.2.patch
# for hardened-gcc let't turn off ssp, since it breakes
# a few routines
cd "${S}"
- if use hardened && [[ $(tc-getF77) = f77 ]]; then
+ if use hardened && ([[ ${FORTRANC} = g77 ]]); then
FFLAGS="${FFLAGS} -fno-stack-protector-all"
fi
+ # some fixes for gfortan;
+ # also append -w otherwise we get flooded with Hollerith
+ # constant warnings
+ if [[ ${FORTRANC} == gfortran ]]; then
+ FFLAGS="${FFLAGS} -w"
+
+ sed -e "s|-fno-move-all-movables|-w|g" \
+ -e "s|*F2C|*F77|g" \
+ -e "s|-Wno-globals -fno-globals||g" \
+ -i comp || die "Failed removing compile flags"
+
+ # need to use _gfortran_ namespace
+ sed -e "s|iargc_|_gfortran_iargc|g" \
+ -e "s|getarg_|_gfortran_getarg_i4|g" \
+ -i ddi/src/ddi_fortran.c || \
+ die "Failed to fix gfortran namespace in ddi_fortran.c"
+ fi
+
# greate proper activate sourcefile
cp "./tools/actvte.code" "./tools/actvte.f" || \
die || "Failed to create actvte.f"
@@ -91,11 +105,11 @@ src_unpack() {
sed -e "s/-malign-double -fautomatic /-cm -w \$MODULE.f/" \
-e "s/-Wno-globals -fno-globals \$MODULE.f//" \
-e "s/gentoo-OPT = '-O2'/OPT = '${FFLAGS} -quiet'/" \
- -e "s/gentoo-g77/$(tc-getF77)/" \
+ -e "s/gentoo-g77/${FORTANC}/" \
-i comp || die "Failed setting up comp script"
else
sed -e "s/gentoo-OPT = '-O2'/OPT = '${FFLAGS}'/" \
- -e "s/gentoo-g77/$(tc-getF77)/" \
+ -e "s/gentoo-g77/${FORTRANC}/" \
-i comp || die "Failed setting up comp script"
fi
@@ -107,11 +121,11 @@ src_unpack() {
# fix up GAMESS' linker script;
if use ifc; then
- sed -e "s/gentoo-LDR='g77'/LDR='$(tc-getF77)'/" \
+ sed -e "s/gentoo-LDR='g77'/LDR='${FORTRANC}'/" \
-e "s/gentoo-LDOPTS=' '/LDOPTS='${LDFLAGS}'/" \
-i lked || die "Failed setting up lked script"
else
- sed -e "s/gentoo-LDR='g77'/LDR='$(tc-getF77)'/" \
+ sed -e "s/gentoo-LDR='g77'/LDR='${FORTRANC}'/" \
-e "s/gentoo-LDOPTS=' '/LDOPTS='${LDFLAGS}'/" \
-i lked || die "Failed patching lked script"
fi
@@ -120,9 +134,9 @@ src_unpack() {
sed -e "s/gentoo-CC = 'gcc'/CC = '$(tc-getCC)'/" \
-i ddi/compddi || die "Failed setting up compddi script"
- # for ifc we have to fix the number of underscores of fortran
- # symbols, otherwise the linker will barf
- if use ifc; then
+ # for ifc/gcc-4.x we have to fix the number of underscores of
+ # fortran symbols, otherwise the linker will barf
+ if use ifc || [[ $(gcc-major-version) -ge 4 ]]; then
sed -e "s/gentoo-F77_OPTS = '-DINT_SIZE=int -D_UNDERSCORES=2/F77_OPTS = '-DINT_SIZE=int -D_UNDERSCORES=1/" \
-i ddi/compddi || die "Failed fixing underscores in compddi"
else
@@ -134,7 +148,8 @@ src_unpack() {
src_compile() {
# build actvte
cd "${S}"/tools
- $(tc-getF77) -o actvte.x actvte.f || die "Failed to compile actvte.x"
+ ${FORTRANC} -o actvte.x actvte.f || \
+ die "Failed to compile actvte.x"
# for hardened (PAX) users and ifc we need to turn
# MPROTECT off
@@ -193,18 +208,25 @@ src_install() {
pkg_postinst() {
echo
- ewarn "Before you use GAMESS for any serious work you HAVE"
- ewarn "to run the supplied test files located in"
- ewarn "/usr/share/gamess/tests and check them thoroughly."
- ewarn "Otherwise all scientific publications resulting from"
- ewarn "your GAMESS runs should be immediately rejected :)"
- ewarn "To do so copy the content of /usr/share/gamess/tests"
- ewarn "to some temporary location and execute './runall'. "
- ewarn "Please consult TEST.DOC and the other docs!"
- ewarn "NOTE: Due to a g77 implementation issue the TDHF code"
- ewarn " currently does not work and exam39 will, therefore,"
- ewarn " not run properly. Please watch bug #114367 "
- ewarn " for this issue!"
+ einfo "Before you use GAMESS for any serious work you HAVE"
+ einfo "to run the supplied test files located in"
+ einfo "/usr/share/gamess/tests and check them thoroughly."
+ einfo "Otherwise all scientific publications resulting from"
+ einfo "your GAMESS runs should be immediately rejected :)"
+ einfo "To do so copy the content of /usr/share/gamess/tests"
+ einfo "to some temporary location and execute './runall'. "
+ einfo "Please consult TEST.DOC and the other docs!"
+
+ if [[ ${FORTRANC} == gfortran ]]; then
+ echo
+ ewarn "If you are using gcc-4.0.x, then due to a gfortran "
+ ewarn "implementation issue the TDHF code currently does not"
+ ewarn "work and exam39 will, therefore, fail."
+ ewarn "If you are using gcc-4.1.x, the resulting binaries "
+ ewarn "will likely not run properly. We strongly recommend"
+ ewarn "to stick with gcc-3.x or gcc-4.0.x until these issues"
+ ewarn "have been addressed."
+ fi
if use ifc; then
echo