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author | Justin Lecher <jlec@gentoo.org> | 2014-09-15 08:20:08 +0000 |
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committer | Justin Lecher <jlec@gentoo.org> | 2014-09-15 08:20:08 +0000 |
commit | f28b55616be814eed9782848660eb1f559553d13 (patch) | |
tree | 3fc5d36ab8d55b2e8c30f8e4ed1400180f0bc4b0 /sci-chemistry/pymol | |
parent | Stable for sparc, wrt bug #512012 (diff) | |
download | gentoo-2-f28b55616be814eed9782848660eb1f559553d13.tar.gz gentoo-2-f28b55616be814eed9782848660eb1f559553d13.tar.bz2 gentoo-2-f28b55616be814eed9782848660eb1f559553d13.zip |
sci-chemistry/pymol: Version Bump
(Portage version: 2.2.12/cvs/Linux x86_64, RepoMan options: --force, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-chemistry/pymol')
-rw-r--r-- | sci-chemistry/pymol/ChangeLog | 7 | ||||
-rw-r--r-- | sci-chemistry/pymol/pymol-1.7.3.0.ebuild | 100 |
2 files changed, 106 insertions, 1 deletions
diff --git a/sci-chemistry/pymol/ChangeLog b/sci-chemistry/pymol/ChangeLog index d64ebc8d0438..ca274c591808 100644 --- a/sci-chemistry/pymol/ChangeLog +++ b/sci-chemistry/pymol/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-chemistry/pymol # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.117 2014/08/21 07:25:44 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.118 2014/09/15 08:20:08 jlec Exp $ + +*pymol-1.7.3.0 (15 Sep 2014) + + 15 Sep 2014; Justin Lecher <jlec@gentoo.org> +pymol-1.7.3.0.ebuild: + Version Bump *pymol-1.7.2.1 (21 Aug 2014) diff --git a/sci-chemistry/pymol/pymol-1.7.3.0.ebuild b/sci-chemistry/pymol/pymol-1.7.3.0.ebuild new file mode 100644 index 000000000000..9bb025baf671 --- /dev/null +++ b/sci-chemistry/pymol/pymol-1.7.3.0.ebuild @@ -0,0 +1,100 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.7.3.0.ebuild,v 1.1 2014/09/15 08:20:08 jlec Exp $ + +EAPI=5 + +PYTHON_COMPAT=( python2_7 ) +PYTHON_REQ_USE="tk" + +inherit distutils-r1 fdo-mime versionator + +DESCRIPTION="A Python-extensible molecular graphics system" +HOMEPAGE="http://www.pymol.org/" +SRC_URI=" + http://dev.gentoo.org/~jlec/distfiles/${PN}-1.7.0.0.png.xz + http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz +" +# mirror://sourceforge/project/${PN}/${PN}/$(get_version_component_range 1-2)/${PN}-v${PV}.tar.bz2 +# git archive -v --prefix=${P}/ master -o ${P}.tar.xz + +LICENSE="PSF-2.2" +SLOT="0" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos" +IUSE="apbs web" + +DEPEND=" + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pmw[${PYTHON_USEDEP}] + dev-python/pyopengl[${PYTHON_USEDEP}] + media-libs/freetype:2 + media-libs/glew + media-libs/libpng + media-video/mpeg-tools + sys-libs/zlib + media-libs/freeglut + apbs? ( + sci-chemistry/apbs + sci-chemistry/pdb2pqr + sci-chemistry/pymol-apbs-plugin[${PYTHON_USEDEP}] + ) + web? ( !dev-python/webpy[${PYTHON_USEDEP}] )" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/${P}/${PN} + +python_prepare_all() { + sed \ + -e "s:\"/usr:\"${EPREFIX}/usr:g" \ + -e "/ext_comp_args/s:=\[.*\]$:= \[\]:g" \ + -e "/import/s:argparse:argparseX:g" \ + -i setup.py || die + + rm ./modules/pmg_tk/startup/apbs_tools.py || die + + sed \ + -e "s:/opt/local:${EPREFIX}/usr:g" \ + -e '/ext_comp_args/s:\[.*\]:[]:g' \ + -i setup.py || die + + distutils-r1_python_prepare_all +} + +python_install() { + distutils-r1_python_install --pymol-path="${EPREFIX}/usr/share/pymol" +} + +python_install_all() { + distutils-r1_python_install_all + + python_export python2_7 EPYTHON + + # These environment variables should not go in the wrapper script, or else + # it will be impossible to use the PyMOL libraries from Python. + cat >> "${T}"/20pymol <<- EOF + PYMOL_PATH="$(python_get_sitedir)/${PN}" + PYMOL_DATA="${EPREFIX}/usr/share/pymol/data" + PYMOL_SCRIPTS="${EPREFIX}/usr/share/pymol/scripts" + EOF + + doenvd "${T}"/20pymol + + newicon "${WORKDIR}"/${PN}-1.7.0.0.png ${PN}.png + make_desktop_entry pymol PyMol ${PN} "Graphics;Education;Science;Chemistry" "MimeType=chemical/x-pdb;" + + if ! use web; then + rm -rf "${D}/$(python_get_sitedir)/web" || die + fi + + rm -f "${ED}"/usr/share/${PN}/LICENSE || die +} + +pkg_postinst() { + fdo-mime_desktop_database_update + fdo-mime_mime_database_update +} + +pkg_postrm() { + fdo-mime_desktop_database_update + fdo-mime_mime_database_update +} |