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authorSebastien Fabbro <bicatali@gentoo.org>2009-10-08 16:31:53 +0000
committerSebastien Fabbro <bicatali@gentoo.org>2009-10-08 16:31:53 +0000
commitd89dcb3987dbd30524dec853cccef1df4c487ec1 (patch)
tree98efe6978d97695bebd4e1c19ec1bf8e9901d67d /sci-visualization
parentRevision bump. Add support for logfile rotation. Closes bug #262035. (diff)
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Import from the science overlay. Thanks François Bissey for his efforts.
(Portage version: 2.2_rc44/cvs/Linux x86_64)
Diffstat (limited to 'sci-visualization')
-rw-r--r--sci-visualization/opendx/ChangeLog50
-rw-r--r--sci-visualization/opendx/files/opendx-4.4.4-concurrent-make-fix.patch33
-rw-r--r--sci-visualization/opendx/files/opendx-4.4.4-dx-errno.patch11
-rw-r--r--sci-visualization/opendx/files/opendx-4.4.4-gcc43-fedora.patch315
-rw-r--r--sci-visualization/opendx/files/opendx-4.4.4-install.patch330
-rw-r--r--sci-visualization/opendx/files/opendx-4.4.4-open.patch34
-rw-r--r--sci-visualization/opendx/files/opendx-4.4.4-szip.patch55
-rw-r--r--sci-visualization/opendx/files/opendx-4.4.4-xdg.patch26
-rw-r--r--sci-visualization/opendx/metadata.xml12
-rw-r--r--sci-visualization/opendx/opendx-4.4.4-r2.ebuild92
10 files changed, 956 insertions, 2 deletions
diff --git a/sci-visualization/opendx/ChangeLog b/sci-visualization/opendx/ChangeLog
index 73ea1155005c..66f079d4d527 100644
--- a/sci-visualization/opendx/ChangeLog
+++ b/sci-visualization/opendx/ChangeLog
@@ -1,6 +1,52 @@
# ChangeLog for sci-visualization/opendx
-# Copyright 2000-2008 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-visualization/opendx/ChangeLog,v 1.15 2008/09/14 11:25:38 spock Exp $
+# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-visualization/opendx/ChangeLog,v 1.16 2009/10/08 16:31:53 bicatali Exp $
+
+ 08 Oct 2009; Sébastien Fabbro <bicatali@gentoo.org>
+ +opendx-4.4.4-r2.ebuild, files/opendx-4.4.4-concurrent-make-fix.patch,
+ +files/opendx-4.4.4-dx-errno.patch,
+ +files/opendx-4.4.4-gcc43-fedora.patch, +files/opendx-4.4.4-install.patch,
+ +files/opendx-4.4.4-open.patch, +files/opendx-4.4.4-szip.patch,
+ +files/opendx-4.4.4-xdg.patch, metadata.xml:
+ Import from the science overlay. Thanks François Bissey for his efforts.
+
+ 14 Jun 2009; François Bissey <f.r.bissey@massey.ac.nz>
+ opendx-4.4.4-r2.ebuild, +files/opendx-4.4.4-szip.patch:
+ Patch configure.ac to make szip a proper configure option
+
+ 12 May 2009; François Bissey <f.r.bissey@massey.ac.nz>
+ files/opendx-4.4.4-concurrent-make-fix.patch:
+ make sure the concurent make fix _always_ works.
+
+*opendx-4.4.4-r2 (11 May 2009)
+
+ 11 May 2009; François Bissey <f.r.bissey@massey.ac.nz>
+ opendx-4.4.4-r1.ebuild, +opendx-4.4.4-r2.ebuild,
+ +files/opendx-4.4.4-install.patch, +files/opendx-4.4.4-xdg.patch:
+ small clean up in opendx-4.4.4-r1, in r2 new layout for the installation
+ and replaced call to netscape/lynx etc... with xdg-open
+
+ 19 Apr 2009; François Bissey <f.r.bissey@massey.ac.nz>
+ +files/opendx-4.4.4-dx-errno.patch,
+ +files/opendx-4.4.4-gcc43-fedora.patch, +files/opendx-4.4.4-open.patch,
+ -files/dx-errno.patch, -files/dx-gcc43-fedora.patch, -files/dx-open.patch,
+ opendx-4.4.4-r1.ebuild:
+ rename patches to something nicer. some cleaning of the ebuild structure.
+ introduce the smp keyword and simplify greatly the associated logic.
+
+*opendx-4.4.4-r1 (17 Apr 2009)
+
+ 17 Apr 2009; François Bissey <f.r.bissey@massey.ac.nz>
+ +files/20-opendx-revdep, +files/opendx-4.3.2-sys.h.patch,
+ +files/opendx-4.4.4-concurrent-make-fix.patch,
+ +files/opendx-4.4.4-libtool.patch, +files/dx-errno.patch,
+ +files/dx-gcc43-fedora.patch, +files/dx-open.patch,
+ +files/opendx-compressed-man.patch, +metadata.xml,
+ +opendx-4.4.4-r1.ebuild:
+ Initial import in the overlay from the main tree. *port to EAPI2 *updated
+ gcc43 patch to upstream/fedora level *added an upstream patch to fix bug
+ #261438 *added a fedora patch to solve a problem dx use all CPU after
+ exiting *updated the source url to a working one
14 Sep 2008; Michał Januszewski <spock@gentoo.org>
+files/opendx-4.4.4-concurrent-make-fix.patch, opendx-4.4.4.ebuild:
diff --git a/sci-visualization/opendx/files/opendx-4.4.4-concurrent-make-fix.patch b/sci-visualization/opendx/files/opendx-4.4.4-concurrent-make-fix.patch
index 816b72c104a7..ba2c9c8c43c4 100644
--- a/sci-visualization/opendx/files/opendx-4.4.4-concurrent-make-fix.patch
+++ b/sci-visualization/opendx/files/opendx-4.4.4-concurrent-make-fix.patch
@@ -31,3 +31,36 @@ diff -Nuarp dx-4.4.4-orig/src/exec/dxmods/local.mk dx-4.4.4/src/exec/dxmods/loca
.y.h:
$(YACC) $(YFLAGS) -d ${srcdir}/$*.y
+diff -Nuarp dx-4.4.4-orig/src/exec/dxmods/local.mk dx-4.4.4/src/exec/dxmods/local.mk
+--- dx-4.4.4-orig/src/exec/dxmods/local.mk.in 2008-09-11 22:31:38.000000000 +0200
++++ dx-4.4.4/src/exec/dxmods/local.mk.in 2008-09-11 22:33:44.000000000 +0200
+@@ -14,15 +14,15 @@ user.c: dx.mdf
+
+ dxcm.mdf: ${srcdir}/dxmdf.src
+ -rm -f dxcm.mdf
+- cp ${srcdir}/dxmdf.src tmp.c
+- $(CPP) $(INCLUDES) $(MDF) $(DEFS) tmp.c > dxcm.mdf
+- -rm -f tmp.c
++ cp ${srcdir}/dxmdf.src tmp-dxcm.c
++ $(CPP) $(INCLUDES) $(MDF) $(DEFS) tmp-dxcm.c > dxcm.mdf
++ -rm -f tmp-dxcm.c
+
+ dx.mdf: ${srcdir}/dxmdf.src
+ echo MYINC: $(MYINC)
+ -rm -f dx.mdf
+- cp ${srcdir}/dxmdf.src tmp.c
+- $(CPP) $(INCLUDES) $(MYINC) $(MDF) $(DEFS) -DCPLUSPLUS_UI -DEXECUTIVE_MODS tmp.c > dx.mdf
++ cp ${srcdir}/dxmdf.src tmp-dx.c
++ $(CPP) $(INCLUDES) $(MYINC) $(MDF) $(DEFS) -DCPLUSPLUS_UI -DEXECUTIVE_MODS tmp-dx.c > dx.mdf
+ @echo '/^ *$$/{' > stripl.sed
+ @echo 'N' >> stripl.sed
+ @echo '/^ *\\n *$$/D' >> stripl.sed
+@@ -30,7 +30,7 @@ dx.mdf: ${srcdir}/dxmdf.src
+ cat dx.mdf |sed '/^#/d' > tmp.mdf
+ cat tmp.mdf |sed -f stripl.sed > dx.mdf
+ @rm -f stripl.sed tmp.mdf
+- -rm -f tmp.c
++ -rm -f tmp-dx.c
+
+ .y.h:
+ $(YACC) $(YFLAGS) -d ${srcdir}/$*.y
diff --git a/sci-visualization/opendx/files/opendx-4.4.4-dx-errno.patch b/sci-visualization/opendx/files/opendx-4.4.4-dx-errno.patch
new file mode 100644
index 000000000000..70c1b28f0e40
--- /dev/null
+++ b/sci-visualization/opendx/files/opendx-4.4.4-dx-errno.patch
@@ -0,0 +1,11 @@
+diff -up dx-4.4.4/src/exec/dpexec/lex.c.errno dx-4.4.4/src/exec/dpexec/lex.c
+--- dx-4.4.4/src/exec/dpexec/lex.c.errno 2006-01-09 23:57:34.000000000 +0100
++++ dx-4.4.4/src/exec/dpexec/lex.c 2009-01-26 19:16:20.000000000 +0100
+@@ -504,6 +504,7 @@ int yylex(YYSTYPE *lvalp)
+ for (;;)
+ {
+ yyleng = 0;
++ errno = 0;
+
+ c = input();
+
diff --git a/sci-visualization/opendx/files/opendx-4.4.4-gcc43-fedora.patch b/sci-visualization/opendx/files/opendx-4.4.4-gcc43-fedora.patch
new file mode 100644
index 000000000000..64a3d91fee6c
--- /dev/null
+++ b/sci-visualization/opendx/files/opendx-4.4.4-gcc43-fedora.patch
@@ -0,0 +1,315 @@
+diff -up dx-4.4.4/src/uipp/startup/StartupApplication.C.gcc43 dx-4.4.4/src/uipp/startup/StartupApplication.C
+--- dx-4.4.4/src/uipp/startup/StartupApplication.C.gcc43 2005-11-10 20:48:22.000000000 +0100
++++ dx-4.4.4/src/uipp/startup/StartupApplication.C 2008-01-07 21:55:03.000000000 +0100
+@@ -117,7 +117,7 @@ InitializeSignals(void)
+ #endif
+ }
+
+-boolean StartupApplication::initialize(unsigned int* argcp,
++boolean StartupApplication::initialize(int* argcp,
+ char** argv)
+ {
+ ASSERT(argcp);
+diff -up dx-4.4.4/src/uipp/startup/StartupApplication.h.gcc43 dx-4.4.4/src/uipp/startup/StartupApplication.h
+--- dx-4.4.4/src/uipp/startup/StartupApplication.h.gcc43 2003-09-20 07:33:56.000000000 +0200
++++ dx-4.4.4/src/uipp/startup/StartupApplication.h 2008-01-07 21:50:47.000000000 +0100
+@@ -84,7 +84,7 @@ class StartupApplication : public IBMApp
+ // Overrides the Application class version:
+ // Initializes Xt Intrinsics with option list (switches).
+ //
+- virtual boolean initialize(unsigned int* argcp, char**argv);
++ virtual boolean initialize(int* argcp, char**argv);
+
+ CommandScope *commandScope; // command scope
+
+diff -up dx-4.4.4/src/uipp/startup/Main.C.gcc43 dx-4.4.4/src/uipp/startup/Main.C
+--- dx-4.4.4/src/uipp/startup/Main.C.gcc43 2000-05-16 20:53:07.000000000 +0200
++++ dx-4.4.4/src/uipp/startup/Main.C 2008-01-07 19:57:58.000000000 +0100
+@@ -14,7 +14,7 @@
+ extern "C" void HCLXmInit();
+ #endif
+
+-int main(unsigned int argc,
++int main( int argc,
+ char** argv)
+ {
+ #if defined(HAVE_HCLXMINIT)
+diff -up dx-4.4.4/src/uipp/base/Application.C.gcc43 dx-4.4.4/src/uipp/base/Application.C
+--- dx-4.4.4/src/uipp/base/Application.C.gcc43 2005-11-09 19:56:17.000000000 +0100
++++ dx-4.4.4/src/uipp/base/Application.C 2008-01-07 22:39:15.000000000 +0100
+@@ -136,7 +136,7 @@ void Application::installDefaultResource
+ //this->setDefaultResources(baseWidget, Application::DefaultResources);
+ }
+
+-boolean Application::initializeWindowSystem(unsigned int *argcp, char **argv)
++boolean Application::initializeWindowSystem(int *argcp, char **argv)
+ {
+
+ //
+@@ -149,7 +149,7 @@ boolean Application::initializeWindowSys
+ NULL, // command line options table
+ 0, // number of entries in options table
+ #if XtSpecificationRelease > 4
+- (int*)argcp,
++ argcp,
+ #else
+ argcp,
+ #endif
+@@ -235,7 +235,7 @@ boolean Application::initializeWindowSys
+ return TRUE;
+ }
+
+-void Application::parseCommand(unsigned int* argcp, char** argv,
++void Application::parseCommand(int* argcp, char** argv,
+ XrmOptionDescList optlist, int optlistsize)
+ {
+ char res_file[256];
+@@ -280,7 +280,7 @@ void Application::parseCommand(unsigned
+ //
+ }
+
+-boolean Application::initialize(unsigned int* argcp, char** argv)
++boolean Application::initialize(int* argcp, char** argv)
+ {
+ //
+ // Initialize the window system if not done already.
+diff -up dx-4.4.4/src/uipp/base/Application.h.gcc43 dx-4.4.4/src/uipp/base/Application.h
+--- dx-4.4.4/src/uipp/base/Application.h.gcc43 2005-11-09 19:26:29.000000000 +0100
++++ dx-4.4.4/src/uipp/base/Application.h 2008-01-07 21:49:49.000000000 +0100
+@@ -49,7 +49,7 @@ class Application : public UIComponent,
+ //
+ // The main program needs to access protected member functions.
+ //
+- friend int main(unsigned int argc,
++ friend int main( int argc,
+ char** argv);
+
+
+@@ -71,9 +71,9 @@ class Application : public UIComponent,
+ //
+ // Initialize the window system.
+ //
+- virtual boolean initializeWindowSystem(unsigned int *argcp, char **argv);
++ virtual boolean initializeWindowSystem(int *argcp, char **argv);
+
+- virtual void parseCommand(unsigned int* argcp, char** argv,
++ virtual void parseCommand(int* argcp, char** argv,
+ XrmOptionDescList optlist, int optlistsize);
+
+ //
+@@ -145,7 +145,7 @@ class Application : public UIComponent,
+ // Initializes any Application specfic state. This routine should
+ // be called by main() or subclasses only.
+ //
+- virtual boolean initialize(unsigned int* argcp, char** argv);
++ virtual boolean initialize(int* argcp, char** argv);
+
+ //
+ // Allow others to access our event processing mechanism
+diff -up dx-4.4.4/src/uipp/base/IBMApplication.C.gcc43 dx-4.4.4/src/uipp/base/IBMApplication.C
+--- dx-4.4.4/src/uipp/base/IBMApplication.C.gcc43 2004-04-02 22:32:43.000000000 +0200
++++ dx-4.4.4/src/uipp/base/IBMApplication.C 2008-01-07 21:53:29.000000000 +0100
+@@ -349,7 +349,7 @@ int status;
+ }
+
+
+-boolean IBMApplication::initializeWindowSystem(unsigned int *argcp, char **argv)
++boolean IBMApplication::initializeWindowSystem(int *argcp, char **argv)
+ {
+
+ if (!this->Application::initializeWindowSystem(argcp, argv))
+@@ -375,7 +375,7 @@ boolean IBMApplication::initializeWindow
+ return TRUE;
+ }
+
+-boolean IBMApplication::initialize(unsigned int* argcp,
++boolean IBMApplication::initialize(int* argcp,
+ char** argv)
+ {
+ if (!this->Application::initialize(argcp,argv))
+diff -up dx-4.4.4/src/uipp/base/IBMApplication.h.gcc43 dx-4.4.4/src/uipp/base/IBMApplication.h
+--- dx-4.4.4/src/uipp/base/IBMApplication.h.gcc43 2003-09-20 07:35:22.000000000 +0200
++++ dx-4.4.4/src/uipp/base/IBMApplication.h 2008-01-07 21:50:19.000000000 +0100
+@@ -77,7 +77,7 @@ class IBMApplication : public Applicatio
+ //
+ // Initialize the window system.
+ //
+- virtual boolean initializeWindowSystem(unsigned int *argcp, char **argv);
++ virtual boolean initializeWindowSystem(int *argcp, char **argv);
+
+ //
+ // Protected member data:
+@@ -88,7 +88,7 @@ class IBMApplication : public Applicatio
+
+ HelpWin *helpWindow;
+
+- boolean initialize(unsigned int* argcp, char** argv);
++ boolean initialize(int* argcp, char** argv);
+
+ //
+ // Load application specific action routines
+diff -up dx-4.4.4/src/uipp/tutor/TutorApplication.h.gcc43 dx-4.4.4/src/uipp/tutor/TutorApplication.h
+--- dx-4.4.4/src/uipp/tutor/TutorApplication.h.gcc43 1999-05-10 17:46:30.000000000 +0200
++++ dx-4.4.4/src/uipp/tutor/TutorApplication.h 2008-01-07 21:49:29.000000000 +0100
+@@ -69,7 +69,7 @@ class TutorApplication : public IBMAppli
+ // Overrides the Application class version:
+ // Initializes Xt Intrinsics with option list (switches).
+ //
+- virtual boolean initialize(unsigned int* argcp,
++ virtual boolean initialize(int* argcp,
+ char** argv);
+
+ //
+diff -up dx-4.4.4/src/uipp/tutor/Main.C.gcc43 dx-4.4.4/src/uipp/tutor/Main.C
+--- dx-4.4.4/src/uipp/tutor/Main.C.gcc43 2000-05-16 20:53:15.000000000 +0200
++++ dx-4.4.4/src/uipp/tutor/Main.C 2008-01-07 19:57:39.000000000 +0100
+@@ -31,7 +31,7 @@ extern "C" void HCLXmInit();
+ //
+ const char *AssertMsgString = "Internal error detected at \"%s\":%d.\n";
+
+-int main(unsigned int argc,
++int main( int argc,
+ char** argv)
+ {
+ #if defined(HAVE_HCLXMINIT)
+diff -up dx-4.4.4/src/uipp/tutor/TutorApplication.C.gcc43 dx-4.4.4/src/uipp/tutor/TutorApplication.C
+--- dx-4.4.4/src/uipp/tutor/TutorApplication.C.gcc43 2006-05-08 18:20:14.000000000 +0200
++++ dx-4.4.4/src/uipp/tutor/TutorApplication.C 2008-01-07 21:56:09.000000000 +0100
+@@ -196,7 +196,7 @@ InitializeSignals(void)
+ #endif
+ }
+
+-boolean TutorApplication::initialize(unsigned int* argcp,
++boolean TutorApplication::initialize(int* argcp,
+ char** argv)
+ {
+ ASSERT(argcp);
+diff -up dx-4.4.4/src/uipp/widgets/MultiText.h.gcc43 dx-4.4.4/src/uipp/widgets/MultiText.h
+--- dx-4.4.4/src/uipp/widgets/MultiText.h.gcc43 2006-01-03 01:12:34.000000000 +0100
++++ dx-4.4.4/src/uipp/widgets/MultiText.h 2008-01-07 19:06:27.000000000 +0100
+@@ -91,7 +91,7 @@ typedef struct _XmMultiTextClassRec* XmM
+ #define XmNsmoothScroll "smoothScroll"
+ #define XmNwaitCursorCount "waitCursorCount"
+
+-#if !(defined(_Xm_h) || defined(XM_H))
++#if !(defined(_Xm_h) || defined(XM_H) || defined(_XM_XM_H))
+ #define XmNmarginHeight "marginHeight"
+ #define XmNmarginWidth "marginWidth"
+ #define XmNwordWrap "wordWrap"
+@@ -109,7 +109,7 @@ typedef struct _XmMultiTextClassRec* XmM
+ #define XmCSmoothScroll "SmoothScroll"
+ #define XmCWaitCursorCount "WaitCursorCount"
+
+-#if !(defined(_Xm_h) || defined(XM_H))
++#if !(defined(_Xm_h) || defined(XM_H) || defined(_XM_XM_H))
+ #define XmCMarginHeight "MarginHeight"
+ #define XmCMarginWidth "MarginWidth"
+ #define XmCWordWrap "WordWrap"
+diff -up dx-4.4.4/src/uipp/dxui/Main.C.gcc43 dx-4.4.4/src/uipp/dxui/Main.C
+--- dx-4.4.4/src/uipp/dxui/Main.C.gcc43 2005-12-07 18:50:53.000000000 +0100
++++ dx-4.4.4/src/uipp/dxui/Main.C 2008-01-07 19:57:21.000000000 +0100
+@@ -48,7 +48,7 @@ extern unsigned long _etext;
+ //
+ const char *AssertMsgString = "Internal error detected at \"%s\":%d.\n";
+
+-int main(unsigned int argc,
++int main( int argc,
+ char** argv)
+ {
+ #if defined(HAVE_HCLXMINIT)
+diff -up dx-4.4.4/src/uipp/prompter/GARApplication.h.gcc43 dx-4.4.4/src/uipp/prompter/GARApplication.h
+--- dx-4.4.4/src/uipp/prompter/GARApplication.h.gcc43 2003-09-20 07:33:21.000000000 +0200
++++ dx-4.4.4/src/uipp/prompter/GARApplication.h 2008-01-07 21:49:05.000000000 +0100
+@@ -129,7 +129,7 @@ class GARApplication : public IBMApplica
+ // Overrides the Application class version:
+ // Initializes Xt Intrinsics with option list (switches).
+ //
+- virtual boolean initialize(unsigned int* argcp,
++ virtual boolean initialize(int* argcp,
+ char** argv);
+
+ CommandScope *commandScope; // command scope
+diff -up dx-4.4.4/src/uipp/prompter/Main.C.gcc43 dx-4.4.4/src/uipp/prompter/Main.C
+--- dx-4.4.4/src/uipp/prompter/Main.C.gcc43 2000-05-16 20:52:59.000000000 +0200
++++ dx-4.4.4/src/uipp/prompter/Main.C 2008-01-07 19:57:01.000000000 +0100
+@@ -17,7 +17,7 @@ extern "C" void HCLXmInit();
+ #endif
+
+
+-int main(unsigned int argc,
++int main( int argc,
+ char** argv)
+ {
+ #if defined(HAVE_HCLXMINIT)
+diff -up dx-4.4.4/src/uipp/prompter/GARApplication.C.gcc43 dx-4.4.4/src/uipp/prompter/GARApplication.C
+--- dx-4.4.4/src/uipp/prompter/GARApplication.C.gcc43 2006-05-08 18:20:13.000000000 +0200
++++ dx-4.4.4/src/uipp/prompter/GARApplication.C 2008-01-07 21:54:28.000000000 +0100
+@@ -198,7 +198,7 @@ InitializeSignals(void)
+ }
+ }
+
+-boolean GARApplication::initialize(unsigned int* argcp,
++boolean GARApplication::initialize(int* argcp,
+ char** argv)
+ {
+ ASSERT(argcp);
+diff -up dx-4.4.4/src/uipp/dxuilib/DXApplication.h.gcc43 dx-4.4.4/src/uipp/dxuilib/DXApplication.h
+--- dx-4.4.4/src/uipp/dxuilib/DXApplication.h.gcc43 2006-05-08 18:20:10.000000000 +0200
++++ dx-4.4.4/src/uipp/dxuilib/DXApplication.h 2008-01-07 21:14:12.000000000 +0100
+@@ -372,7 +372,7 @@ class DXApplication : public IBMApplicat
+ // Overrides the Application class version:
+ // Initializes Xt Intrinsics with option list (switches).
+ //
+- virtual boolean initialize(unsigned int* argcp,
++ virtual boolean initialize(int* argcp,
+ char** argv);
+
+ //
+diff -up dx-4.4.4/src/uipp/dxuilib/DXApplication.C.gcc43 dx-4.4.4/src/uipp/dxuilib/DXApplication.C
+--- dx-4.4.4/src/uipp/dxuilib/DXApplication.C.gcc43 2006-06-22 21:45:34.000000000 +0200
++++ dx-4.4.4/src/uipp/dxuilib/DXApplication.C 2008-01-07 21:32:56.000000000 +0100
+@@ -2248,7 +2248,7 @@ void DXApplication::installDefaultResour
+ this->setDefaultResources(baseWidget, _defaultDXResources);
+ this->IBMApplication::installDefaultResources(baseWidget);
+ }
+-boolean DXApplication::initialize(unsigned int* argcp,
++boolean DXApplication::initialize(int* argcp,
+ char** argv)
+ {
+ boolean wasSetBusy = FALSE;
+diff -up dx-4.4.4/src/uipp/mb/Main.C.gcc43 dx-4.4.4/src/uipp/mb/Main.C
+--- dx-4.4.4/src/uipp/mb/Main.C.gcc43 2000-05-20 19:49:40.000000000 +0200
++++ dx-4.4.4/src/uipp/mb/Main.C 2008-01-07 19:56:41.000000000 +0100
+@@ -22,7 +22,7 @@ extern "C" void HCLXmInit();
+ //
+ const char *AssertMsgString = "Internal error detected at \"%s\":%d.\n";
+
+-int main(unsigned int argc,
++int main( int argc,
+ char** argv)
+ {
+ #if defined(HAVE_HCLXMINIT)
+diff -up dx-4.4.4/src/uipp/mb/MBApplication.C.gcc43 dx-4.4.4/src/uipp/mb/MBApplication.C
+--- dx-4.4.4/src/uipp/mb/MBApplication.C.gcc43 2006-05-08 18:20:13.000000000 +0200
++++ dx-4.4.4/src/uipp/mb/MBApplication.C 2008-01-07 21:51:15.000000000 +0100
+@@ -117,7 +117,7 @@ InitializeSignals(void)
+ #endif
+ }
+
+-boolean MBApplication::initialize(unsigned int* argcp,
++boolean MBApplication::initialize(int* argcp,
+ char** argv)
+ {
+ ASSERT(argcp);
+diff -up dx-4.4.4/src/uipp/mb/MBApplication.h.gcc43 dx-4.4.4/src/uipp/mb/MBApplication.h
+--- dx-4.4.4/src/uipp/mb/MBApplication.h.gcc43 1999-05-10 17:46:25.000000000 +0200
++++ dx-4.4.4/src/uipp/mb/MBApplication.h 2008-01-07 21:48:38.000000000 +0100
+@@ -51,7 +51,7 @@ class MBApplication : public IBMApplicat
+ // Overrides the Application class version:
+ // Initializes Xt Intrinsics with option list (switches).
+ //
+- virtual boolean initialize(unsigned int* argcp,
++ virtual boolean initialize(int* argcp,
+ char** argv);
+
+ static MBResource resource;
diff --git a/sci-visualization/opendx/files/opendx-4.4.4-install.patch b/sci-visualization/opendx/files/opendx-4.4.4-install.patch
new file mode 100644
index 000000000000..342f6f88baad
--- /dev/null
+++ b/sci-visualization/opendx/files/opendx-4.4.4-install.patch
@@ -0,0 +1,330 @@
+diff -up dx-4.4.4/bin/dx.in.r dx-4.4.4/bin/dx.in
+--- dx-4.4.4/bin/dx.in.r 2004-05-31 18:12:05.000000000 +0200
++++ dx-4.4.4/bin/dx.in 2009-01-26 23:57:11.000000000 +0100
+@@ -60,14 +60,7 @@ exit 1
+ #
+ longhelp() {
+
+-if test -f "$dxroot/man/catl/dx.l" ; then
+- more "$dxroot/man/catl/dx.l"
+-else
+- echo "cannot find $dxroot/man/catl/dx.l"
+- echo "set the DXROOT environment variable to the root of the"
+- echo "dx installation tree and try again."
+-fi
+-exit 1
++man dx
+
+ cat << EOFlonghelp
+ command line parameters:
+@@ -286,7 +279,7 @@ fi
+
+
+ if [ -z "$DXROOT" ]; then
+- prefix=@prefix@
++ prefix=@libdir@
+ DXROOT=$prefix/dx
+ fi
+ export DXROOT
+@@ -507,7 +507,7 @@ export DXARCH
+
+ # default to running locally, from @prefix@/dx
+ exhost=$thishost
+-dxroot=@prefix@/dx
++dxroot=@libdir@/dx
+ startup=1 # run the startup window by default
+
+
+diff -up dx-4.4.4/bin/Makefile.am.r dx-4.4.4/bin/Makefile.am
+--- dx-4.4.4/bin/Makefile.am.r 2003-07-12 02:11:37.000000000 +0200
++++ dx-4.4.4/bin/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ ## Process this file with automake to produce Makefile.in
+
+-dxbindir = $(prefix)/dx/bin
++dxbindir = $(libdir)/dx/bin
+ bindir = $(prefix)/bin
+
+ EXTRA_SCRIPTS = mdf2c dx
+diff -up dx-4.4.4/bin/mdf2c.in.r dx-4.4.4/bin/mdf2c.in
+--- dx-4.4.4/bin/mdf2c.in.r 1999-12-14 05:13:04.000000000 +0100
++++ dx-4.4.4/bin/mdf2c.in 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ #!/bin/sh
+ # Configure is looking for the following line
+-prefix=@prefix@
++prefix=@libdir@
+ DFLTROOT=$prefix/dx
+ root=${DXROOT=${DXEXECROOT=$DFLTROOT}}
+
+diff -up dx-4.4.4/doc/Makefile.am.r dx-4.4.4/doc/Makefile.am
+--- dx-4.4.4/doc/Makefile.am.r 1999-04-05 13:57:03.000000000 +0200
++++ dx-4.4.4/doc/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ ## Process this file with automake to produce Makefile.in
+
+-docdir = $(prefix)/dx/doc
++docdir = $(datadir)/dx/doc
+
+ doc_DATA = \
+ README README_SMP README_alphax README_aviion README_hp700 \
+diff -up dx-4.4.4/fonts/Makefile.am.r dx-4.4.4/fonts/Makefile.am
+--- dx-4.4.4/fonts/Makefile.am.r 2003-07-12 02:11:37.000000000 +0200
++++ dx-4.4.4/fonts/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ ## Process this file with automake to produce Makefile.in
+
+-fontdir = $(prefix)/dx/fonts
++fontdir = $(libdir)/dx/fonts
+
+ font_DATA = \
+ README area.dx cyril_d.dx \
+diff -up dx-4.4.4/help/Makefile.am.r dx-4.4.4/help/Makefile.am
+--- dx-4.4.4/help/Makefile.am.r 2003-07-12 02:11:37.000000000 +0200
++++ dx-4.4.4/help/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ ## Process this file with automake to produce Makefile.in
+
+-helpdir = $(prefix)/dx/help
++helpdir = $(libdir)/dx/help
+
+ EXTRA_DIST = $(helpfiles1) $(helpfiles2) $(helpfiles3) $(helpfiles4) $(helpfiles5) \
+ $(helpfiles6) $(helpfiles7) $(helpfiles8) $(helpfiles9) $(helpfiles10) \
+diff -up dx-4.4.4/html/images/Makefile.am.r dx-4.4.4/html/images/Makefile.am
+--- dx-4.4.4/html/images/Makefile.am.r 2002-04-01 10:51:13.000000000 +0200
++++ dx-4.4.4/html/images/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,5 +1,5 @@
+
+-imagesdir = $(prefix)/dx/html/images
++imagesdir = $(libdir)/dx/html/images
+
+ images1 = \
+ 3dcurs.gif adctlpt.gif arch.gif autoax.gif autoexp.gif \
+diff -up dx-4.4.4/html/Makefile.am.r dx-4.4.4/html/Makefile.am
+--- dx-4.4.4/html/Makefile.am.r 2003-07-12 02:11:39.000000000 +0200
++++ dx-4.4.4/html/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ ## Process this file with automake to produce Makefile.in
+
+-htmldir = $(prefix)/dx/html
++htmldir = $(libdir)/dx/html
+
+ SUBDIRS = pages images
+
+diff -up dx-4.4.4/html/pages/Makefile.am.r dx-4.4.4/html/pages/Makefile.am
+--- dx-4.4.4/html/pages/Makefile.am.r 2002-06-20 06:38:03.000000000 +0200
++++ dx-4.4.4/html/pages/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,4 +1,4 @@
+-pagesdir = $(prefix)/dx/html/pages
++pagesdir = $(libdir)/dx/html/pages
+
+ pages1 = \
+ insgu002.htm insgu003.htm insgu004.htm insgu005.htm insgu006.htm \
+diff -up dx-4.4.4/include/dx/Makefile.am.r dx-4.4.4/include/dx/Makefile.am
+--- dx-4.4.4/include/dx/Makefile.am.r 1999-05-26 01:35:16.000000000 +0200
++++ dx-4.4.4/include/dx/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ ## Process this file with automake to produce Makefile.in
+
+-dxincdir = $(prefix)/dx/include/dx
++dxincdir = $(prefix)/include/dx
+
+ dxinc_HEADERS = \
+ UserInteractors.h advanced.h arch.h array.h arrayhandles.h \
+diff -up dx-4.4.4/include/Makefile.am.r dx-4.4.4/include/Makefile.am
+--- dx-4.4.4/include/Makefile.am.r 2006-04-09 05:44:49.000000000 +0200
++++ dx-4.4.4/include/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,4 +1,4 @@
+-dxincdir = $(prefix)/dx/include
++dxincdir = $(prefix)/include
+ SUBDIRS = dx
+ dxinc_HEADERS = dxl.h dxstereo.h
+ nodist_dxinc_HEADERS = dxconfig.h
+diff -up dx-4.4.4/lib/Makefile.am.r dx-4.4.4/lib/Makefile.am
+--- dx-4.4.4/lib/Makefile.am.r 2003-08-22 01:22:13.000000000 +0200
++++ dx-4.4.4/lib/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,4 +1,4 @@
+-libsdir = $(prefix)/dx/lib
++libsdir = $(libdir)/dx/lib
+
+ libs_DATA = colors.txt dxexec.def dxexec.exp dxexec.imp dxexec.ifs \
+ dxfSaveCurrentImage.net dxrc mdf2c.awk messages outboard.c
+diff -up dx-4.4.4/man/Makefile.am.r dx-4.4.4/man/Makefile.am
+--- dx-4.4.4/man/Makefile.am.r 1999-04-03 18:31:28.000000000 +0200
++++ dx-4.4.4/man/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,4 +1,4 @@
+ ## Process this file with automake to produce Makefile.in
+
+-SUBDIRS = manl catl
++SUBDIRS = manl
+
+diff -up dx-4.4.4/man/manl/Makefile.am.r dx-4.4.4/man/manl/Makefile.am
+--- dx-4.4.4/man/manl/Makefile.am.r 2002-05-20 06:47:06.000000000 +0200
++++ dx-4.4.4/man/manl/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ ## Process this file with automake to produce Makefile.in
+
+-mandir = $(prefix)/dx/man
++mandir = $(prefix)/man
+
+ man_MANS = dx.l
+ EXTRA_DIST = $(man_MANS)
+diff -up dx-4.4.4/src/exec/dxexec/Makefile.am.r dx-4.4.4/src/exec/dxexec/Makefile.am
+--- dx-4.4.4/src/exec/dxexec/Makefile.am.r 2006-01-11 17:24:39.000000000 +0100
++++ dx-4.4.4/src/exec/dxexec/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -9,7 +9,7 @@ noinst_LTLIBRARIES = libDXEXEC.la
+ libDXEXEC_la_SOURCES = main.c
+ libDXEXEC_la_CFLAGS = $(AM_CFLAGS)
+
+-bindir = $(prefix)/dx/bin_@ARCH@
++bindir = $(libdir)/dx/bin_@ARCH@
+ bin_PROGRAMS = dxexec
+
+ dxexec_LDADD = ../dpexec/libDPEXEC.la ../dxmods/libDXMODS.la ../dxmods/user.lo \
+diff -up dx-4.4.4/src/exec/dxmods/Makefile.am.r dx-4.4.4/src/exec/dxmods/Makefile.am
+--- dx-4.4.4/src/exec/dxmods/Makefile.am.r 2003-08-19 00:51:10.000000000 +0200
++++ dx-4.4.4/src/exec/dxmods/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,8 +1,8 @@
+ ## Process this file with automake to produce Makefile.in
+
+ INCLUDES = -I${top_srcdir}/include -I${srcdir}/../dpexec -I$(BUILDBASE)/include -D@ARCH@
+
+-dxmdfdir = $(prefix)/dx/lib
++dxmdfdir = $(libdir)/dx/lib
+ noinst_LTLIBRARIES = libDXMODS.la libusercm.la libuser.la libDXMODSN.la
+ SUFFIXES = .c .y .c .s .h .o
+
+@@ -13,6 +14,8 @@ DISTCLEANFILES = dx.mdf dxcm.mdf user.c
+
+ dxmdf_DATA = dx.mdf
+
++user.c: dx.mdf
++
+ _complex.o: _compparse.h
+
+ HEADERS1 = \
+diff -up dx-4.4.4/src/exec/libdx/Makefile.am.r dx-4.4.4/src/exec/libdx/Makefile.am
+--- dx-4.4.4/src/exec/libdx/Makefile.am.r 2006-03-27 20:56:53.000000000 +0200
++++ dx-4.4.4/src/exec/libdx/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -7,7 +7,7 @@ MICRO_VERSION=@MICRO_VERSION@
+ #INCLUDES = -I../../../include -D@ARCH@
+ INCLUDES = -I${top_srcdir}/include -D@ARCH@
+
+-dxlibdir = $(prefix)/dx/lib_@ARCH@
++dxlibdir = $(libdir)/dx/lib_@ARCH@
+
+ noinst_LTLIBRARIES = libLIBDX.la libcallm.la libmem.la
+ #dxlib_LIBRARIES = libDXlite.a
+diff -up dx-4.4.4/src/exec/Makefile.am.r dx-4.4.4/src/exec/Makefile.am
+--- dx-4.4.4/src/exec/Makefile.am.r 2003-09-17 00:40:40.000000000 +0200
++++ dx-4.4.4/src/exec/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ SUBDIRS = libdx dxmods hwrender dpexec dxexec
+
+-dxlibdir = $(prefix)/dx/lib_@ARCH@
++dxlibdir = $(libdir)/dx/lib_@ARCH@
+
+ MAJOR_VERSION=@MAJOR_VERSION@
+ MINOR_VERSION=@MINOR_VERSION@
+diff -up dx-4.4.4/src/misc/Makefile.am.r dx-4.4.4/src/misc/Makefile.am
+--- dx-4.4.4/src/misc/Makefile.am.r 2003-07-12 02:12:13.000000000 +0200
++++ dx-4.4.4/src/misc/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -4,7 +4,7 @@ INCLUDES = -I${top_srcdir}/include -D@AR
+
+ dxbindir = $(prefix)/bin
+ noinst_PROGRAMS = dxlocal
+-archmakdir = $(prefix)/dx/lib_$(ARCH)
++archmakdir = $(libdir)/dx/lib_$(ARCH)
+ archmak_DATA = arch.mak
+
+ dxlocal_SOURCES = dx.c utils.c
+@@ -15,5 +15,5 @@ install-exec-local:
+ if test ! -z "@INSTALL_BIN_PROGRAM@" ; then \
+ $(mkinstalldirs) $(prefix)/bin ; \
+ $(INSTALL) dxlocal@EXEEXT@ \
+- $(prefix)/dx/bin_$(ARCH)/@INSTALL_BIN_PROGRAM@@EXEEXT@ ; \
++ $(libdir)/dx/bin_$(ARCH)/@INSTALL_BIN_PROGRAM@@EXEEXT@ ; \
+ fi
+diff -up dx-4.4.4/src/uipp/dxl/Makefile.am.r dx-4.4.4/src/uipp/dxl/Makefile.am
+--- dx-4.4.4/src/uipp/dxl/Makefile.am.r 2003-07-12 02:12:16.000000000 +0200
++++ dx-4.4.4/src/uipp/dxl/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -7,7 +7,7 @@ MICRO_VERSION=@MICRO_VERSION@
+
+ INCLUDES = -I${top_srcdir}/include -D@ARCH@
+
+-dxlibdir = $(prefix)/dx/lib_@ARCH@
++dxlibdir = $(libdir)/dx/lib_@ARCH@
+
+ noinst_HEADERS = \
+ dxlP.h \
+diff -up dx-4.4.4/src/uipp/dxui/Makefile.am.r dx-4.4.4/src/uipp/dxui/Makefile.am
+--- dx-4.4.4/src/uipp/dxui/Makefile.am.r 2003-07-12 02:12:17.000000000 +0200
++++ dx-4.4.4/src/uipp/dxui/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -2,7 +2,7 @@
+
+ INCLUDES = -I${srcdir}/../base -I${top_srcdir}/include -I${srcdir}/../dxuilib -D@ARCH@
+
+-dxbindir = $(prefix)/dx/bin_@ARCH@
++dxbindir = $(libdir)/dx/bin_@ARCH@
+ dxbin_PROGRAMS = dxui
+
+
+diff -up dx-4.4.4/src/uipp/mb/Makefile.am.r dx-4.4.4/src/uipp/mb/Makefile.am
+--- dx-4.4.4/src/uipp/mb/Makefile.am.r 2003-08-20 16:21:33.000000000 +0200
++++ dx-4.4.4/src/uipp/mb/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -2,7 +2,7 @@
+
+ INCLUDES = -I${top_srcdir}/include -I${srcdir}/../base -I${srcdir}/../widgets -D@ARCH@
+
+-dxbindir = $(prefix)/dx/bin_@ARCH@
++dxbindir = $(libdir)/dx/bin_@ARCH@
+
+ dxbin_PROGRAMS = builder
+
+diff -up dx-4.4.4/src/uipp/prompter/Makefile.am.r dx-4.4.4/src/uipp/prompter/Makefile.am
+--- dx-4.4.4/src/uipp/prompter/Makefile.am.r 2003-11-04 05:20:14.000000000 +0100
++++ dx-4.4.4/src/uipp/prompter/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -2,7 +2,7 @@
+
+ INCLUDES = -I${srcdir}/../base -I${top_srcdir}/include -D@ARCH@
+
+-dxbindir = $(prefix)/dx/bin_@ARCH@
++dxbindir = $(libdir)/dx/bin_@ARCH@
+
+ dxbin_PROGRAMS = prompter
+
+diff -up dx-4.4.4/src/uipp/startup/Makefile.am.r dx-4.4.4/src/uipp/startup/Makefile.am
+--- dx-4.4.4/src/uipp/startup/Makefile.am.r 2003-07-12 02:12:29.000000000 +0200
++++ dx-4.4.4/src/uipp/startup/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -2,7 +2,7 @@
+
+ INCLUDES = -I${top_srcdir}/include -I${srcdir}/../base -D@ARCH@
+
+-dxbindir = $(prefix)/dx/bin_@ARCH@
++dxbindir = $(libdir)/dx/bin_@ARCH@
+
+ dxbin_PROGRAMS = startupui
+
+diff -up dx-4.4.4/src/uipp/tutor/Makefile.am.r dx-4.4.4/src/uipp/tutor/Makefile.am
+--- dx-4.4.4/src/uipp/tutor/Makefile.am.r 2003-07-12 02:12:29.000000000 +0200
++++ dx-4.4.4/src/uipp/tutor/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -2,7 +2,7 @@
+
+ INCLUDES = -I${top_srcdir}/include -I${srcdir}/../base -D@ARCH@
+
+-dxbindir = $(prefix)/dx/bin_@ARCH@
++dxbindir = $(libdir)/dx/bin_@ARCH@
+
+ dxbin_PROGRAMS = tutor
+
+diff -up dx-4.4.4/src/uipp/ui/Makefile.am.r dx-4.4.4/src/uipp/ui/Makefile.am
+--- dx-4.4.4/src/uipp/ui/Makefile.am.r 2001-04-12 16:29:02.000000000 +0200
++++ dx-4.4.4/src/uipp/ui/Makefile.am 2009-01-26 23:57:11.000000000 +0100
+@@ -1,6 +1,6 @@
+ ## Process this file with automake to produce Makefile.in
+
+-uidatadir = $(prefix)/dx/ui
++uidatadir = $(libdir)/dx/ui
+
+ DATA1 = \
+ icon50.dat icon50.xpm logo.dat logo.xpm ui.mdf Basic2D.cfg Basic2D.net \
diff --git a/sci-visualization/opendx/files/opendx-4.4.4-open.patch b/sci-visualization/opendx/files/opendx-4.4.4-open.patch
new file mode 100644
index 000000000000..b62ebd094be7
--- /dev/null
+++ b/sci-visualization/opendx/files/opendx-4.4.4-open.patch
@@ -0,0 +1,34 @@
+diff -up dx-4.4.4/src/exec/libdx/fileio.c.open dx-4.4.4/src/exec/libdx/fileio.c
+--- dx-4.4.4/src/exec/libdx/fileio.c.open 2006-01-05 23:55:47.000000000 +0100
++++ dx-4.4.4/src/exec/libdx/fileio.c 2008-09-24 19:16:30.000000000 +0200
+@@ -263,7 +263,7 @@ Error _dxffile_open(char *name, int rw)
+ case 2:/* read/write */
+ fd = open(name, O_RDWR);
+ if (fd < 0) {
+- fd = open(name, O_WRONLY | O_CREAT);
++ fd = open(name, O_WRONLY | O_CREAT, S_IRUSR | S_IWUSR);
+ if (fd < 0) {
+ DXSetError(ERROR_DATA_INVALID,
+ "can't open/create file '%s'", name);
+diff -up dx-4.4.4/src/exec/libdx/plock.c.open dx-4.4.4/src/exec/libdx/plock.c
+--- dx-4.4.4/src/exec/libdx/plock.c.open 2002-07-17 06:48:18.000000000 +0200
++++ dx-4.4.4/src/exec/libdx/plock.c 2008-09-24 19:16:30.000000000 +0200
+@@ -37,7 +37,8 @@ struct seminfo *__buf; /* buffer fo
+
+ #define SEM_FLAGS (IPC_CREAT | S_IRUSR | S_IWUSR | S_IRGRP | S_IWGRP | S_IROTH | S_IWOTH)
+ #define SHM_FLAGS (IPC_CREAT | S_IRUSR | S_IWUSR | S_IRGRP | S_IWGRP | S_IROTH | S_IWOTH)
+-#define OPEN_FLAGS (O_CREAT | S_IRUSR | S_IWUSR | S_IRGRP | S_IWGRP | S_IROTH | S_IWOTH)
++#define OPEN_FLAGS (O_CREAT)
++#define OPEN_MODE (S_IRUSR | S_IWUSR | S_IRGRP | S_IWGRP | S_IROTH | S_IWOTH)
+ #define IS_MINE(a) (locks->_owner[a] == getpid())
+ #define SET_OWNER(a) (locks->_owner[a] = getpid())
+ #define CLEAR_OWNER(a) (locks->_owner[a] = 0)
+@@ -268,7 +269,7 @@ PLockInit()
+
+ if (stat(LOCKFILE, &statbuf))
+ {
+- int fd = open(LOCKFILE, OPEN_FLAGS);
++ int fd = open(LOCKFILE, OPEN_FLAGS, OPEN_MODE);
+ if (fd < 0)
+ {
+ fprintf(stderr, "initLocks: error accessing locks shared block: open\n");
diff --git a/sci-visualization/opendx/files/opendx-4.4.4-szip.patch b/sci-visualization/opendx/files/opendx-4.4.4-szip.patch
new file mode 100644
index 000000000000..5e63d4e6b210
--- /dev/null
+++ b/sci-visualization/opendx/files/opendx-4.4.4-szip.patch
@@ -0,0 +1,55 @@
+--- configure.ac.orig 2009-06-14 22:10:24.000000000 +1200
++++ configure.ac 2009-06-14 22:26:29.000000000 +1200
+@@ -148,6 +148,12 @@ AC_ARG_WITH(netcdf,
+ [with_netcdf=$withval],
+ [with_netcdf='yes'])
+
++# Enable szip.
++AC_ARG_WITH(szlib,
++ [ --with-szlib Use szlib library for external szlib I/O (default is yes)],
++ [with_szlib=$withval],
++ [with_szlib='yes'])
++
+ # Enable 64-bit arenas, if supported
+ AC_ARG_WITH(large-arenas,
+ [ --with-large-arenas enable 64-bit arenas, when available (default is no)],
+@@ -790,6 +796,39 @@ fi
+
+
+ #
++# Check for szlib
++#
++have_szlib='no'
++LIB_SZLIB=''
++if test "$with_szlib" != 'no'
++then
++ AS_MESSAGE([checking for szlib ......])
++ failed=0;
++ passed=0;
++ AC_CHECK_HEADERS(szlib.h, passed=`expr $passed + 1`,failed=`expr $failed + 1`)
++ AC_CHECK_LIB(sz, SZ_BufftoBuffCompress,passed=`expr $passed + 1`,failed=`expr $failed + 1`,)
++ AC_MSG_CHECKING(if szlib package is complete)
++ if test $passed -gt 0
++ then
++ if test $failed -gt 0
++ then
++ AC_MSG_RESULT(no -- some components failed test)
++ have_szlib='no (failed tests)'
++ else
++ LIB_SZLIB='-lsz'
++ LIBS="$LIB_SZLIB $LIBS"
++ FMT_LIBS="$FMT_LIBS libsz.a"
++ AC_DEFINE(HAVE_LIBSZIP, 1, [Define to 1 if you have the SZLIB libraries])
++ AC_MSG_RESULT(yes)
++ have_szlib='yes'
++ fi
++ else
++ AC_MSG_RESULT(no)
++ fi
++fi
++
++
++#
+ # Check for IMAGEMAGICK
+ #
+ have_magick='no'
diff --git a/sci-visualization/opendx/files/opendx-4.4.4-xdg.patch b/sci-visualization/opendx/files/opendx-4.4.4-xdg.patch
new file mode 100644
index 000000000000..c5b38f274bcd
--- /dev/null
+++ b/sci-visualization/opendx/files/opendx-4.4.4-xdg.patch
@@ -0,0 +1,26 @@
+diff -up bin/url_handler.sh.orig bin/url_handler.sh
+--- bin/url_handler.sh.orig 2009-05-02 23:21:08.000000000 +1200
++++ bin/url_handler.sh 2009-05-02 23:24:25.000000000 +1200
+@@ -27,21 +27,7 @@ case $method in
+ mailto) mutt `echo "$url" | sed 's;^[^:]*:\(.*\);\1;'`
+ ;;
+
+- *) use_xbrowser=n
+- case "$DISPLAY" in
+- :0) use_xbrowser=y
+- ;;
+- :0.*) use_xbrowser=y
+- ;;
+- unix:0.*) use_xbrowser=y
+- ;;
+- esac
+- if [ $use_xbrowser = n ]; then
+- lynx "$url"
+- else
+- netscape -remote "openURL($url)" 2> /dev/null || \
+- (netscape "$url" &)
+- fi
++ *) xdg-open "$url"
+ ;;
+ esac
+
diff --git a/sci-visualization/opendx/metadata.xml b/sci-visualization/opendx/metadata.xml
index 016c1159bb6c..010523757606 100644
--- a/sci-visualization/opendx/metadata.xml
+++ b/sci-visualization/opendx/metadata.xml
@@ -2,6 +2,18 @@
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<herd>sci</herd>
+<longdescription lang='en'>
+ The Open Data Explorer brings together dynamic computational
+ and rendering tools in a dynamic, programmable framework that
+ enables users to rapidly create visualizations of highly complex
+ data from disparate sources.
+
+ Data Explorer can be used to add visualization capabilities to
+ existing applications. It is used by companies and institutions for
+ applications in a large variety of visualization fields including
+ computational fluid dynamics, medical imagery, computational
+ chemistry, and engineering analysis.
+</longdescription>
<use>
<flag name='cdf'>Add support for <pkg>sci-libs/cdf</pkg> data exchange
format</flag>
diff --git a/sci-visualization/opendx/opendx-4.4.4-r2.ebuild b/sci-visualization/opendx/opendx-4.4.4-r2.ebuild
new file mode 100644
index 000000000000..44d0b66fca25
--- /dev/null
+++ b/sci-visualization/opendx/opendx-4.4.4-r2.ebuild
@@ -0,0 +1,92 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-visualization/opendx/opendx-4.4.4-r2.ebuild,v 1.1 2009/10/08 16:31:53 bicatali Exp $
+
+EAPI=2
+
+inherit eutils flag-o-matic autotools multilib
+
+DESCRIPTION="A 3D data visualization tool"
+HOMEPAGE="http://www.opendx.org/"
+SRC_URI="http://opendx.sdsc.edu/source/${P/open}.tar.gz"
+
+LICENSE="IPL-1"
+SLOT="0"
+
+KEYWORDS="~amd64 ~ppc ~x86"
+
+IUSE="hdf cdf netcdf tiff imagemagick szip smp"
+
+DEPEND="x11-libs/libXmu
+ x11-libs/libXi
+ x11-libs/libXp
+ x11-libs/libXpm
+ x11-libs/openmotif
+ szip? ( sci-libs/szip )
+ hdf? ( sci-libs/hdf )
+ cdf? ( sci-libs/cdf )
+ netcdf? ( sci-libs/netcdf )
+ tiff? ( media-libs/tiff )
+ imagemagick? ( >=media-gfx/imagemagick-5.3.4[-hdri] )"
+
+RDEPEND="${DEPEND}"
+# waiting on bug #36349 for media-libs/jasper in imagemagick
+
+S="${WORKDIR}/${P/open}"
+
+src_prepare() {
+ epatch "${FILESDIR}/${PN}-4.3.2-sys.h.patch"
+ epatch "${FILESDIR}/${P}-install.patch"
+ epatch "${FILESDIR}/${P}-xdg.patch"
+ epatch "${FILESDIR}/${P}-gcc43-fedora.patch"
+ epatch "${FILESDIR}/${P}-dx-errno.patch"
+ epatch "${FILESDIR}/${P}-libtool.patch"
+ epatch "${FILESDIR}/${P}-concurrent-make-fix.patch"
+ epatch "${FILESDIR}/${P}-open.patch"
+ epatch "${FILESDIR}/${P}-szip.patch"
+ eautoreconf
+}
+
+src_configure() {
+ # check flag filtering
+ # with gcc 3.3.2 I had an infinite loop on src/exec/libdx/zclipQ.c
+ append-flags -fno-strength-reduce
+
+ # (#82672)
+ filter-flags -finline-functions
+ replace-flags -O3 -O2
+
+ # opendx uses this variable
+ local GENTOOARCH="${ARCH}"
+ unset ARCH
+
+ econf \
+ "--libdir=/usr/$(get_libdir)" \
+ "--with-x" \
+ "--without-javadx" \
+ $(use_with szip szlib) \
+ $(use_with cdf) \
+ $(use_with netcdf) \
+ $(use_with hdf) \
+ $(use_with tiff) \
+ $(use_with imagemagick magick) \
+ $(use_enable smp smp-linux)
+
+ ARCH="${GENTOOARCH}"
+ # javadx is currently broken. we may try to fix it someday.
+}
+
+src_compile() {
+ local GENTOOARCH="${ARCH}"
+ unset ARCH
+
+ emake || die
+ ARCH="${GENTOOARCH}"
+}
+
+src_install() {
+ emake DESTDIR="${D}" install || die
+
+ newicon "src/uipp/ui/icon50.xpm" "${PN}.xpm"
+ make_desktop_entry dx "openDX" "${PN}.xpm" "DataVisualization;Education;Science;"
+}