Add UW license used by sci-biology/seaview.

4 files changed, 171 insertions, 4 deletions

diff --git a/sys-cluster/charm/ChangeLog b/sys-cluster/charm/ChangeLog
index efa0e3fec9d5..02a2772ecb07 100644
--- a/sys-cluster/charm/ChangeLog
+++ b/sys-cluster/charm/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sys-cluster/charm
 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sys-cluster/charm/ChangeLog,v 1.16 2009/03/30 13:56:22 loki_val Exp $
+# $Header: /var/cvsroot/gentoo-x86/sys-cluster/charm/ChangeLog,v 1.17 2009/05/28 00:07:38 je_fro Exp $
+
+*charm-6.1.2 (04 May 2009)
+
+  04 May 2009; Jeff Gardner <je_fro@gentoo.org> +charm-6.1.2.ebuild:
+  Latest version
 
   30 Mar 2009; Peter Alfredsen <loki_val@gentoo.org> charm-5.9.ebuild:
   Update dependencies w.r.t. bug 264230, fully-split-out poppler transition.
diff --git a/sys-cluster/charm/Manifest b/sys-cluster/charm/Manifest
index 9be0b9d62932..cdda2b4e119e 100644
--- a/sys-cluster/charm/Manifest
+++ b/sys-cluster/charm/Manifest
@@ -6,6 +6,8 @@ AUX charm-examples-gentoo.patch 3920 RMD160 d038f9e2f32db47a6f335c92dd73e727a54d
 AUX charm-fpic-gentoo.patch 963 RMD160 d725ce4085638996244db909d4b30ce0e5623bce SHA1 02e80605505bf1aa3ec371643b165f3890ba0cc1 SHA256 e02cc065399771a3f6e2946446fc47809df1eae6fa40a9bc00b1947805a2f5ec
 AUX charm-python-configure-gentoo.patch 984 RMD160 fb7f9279e528d3e74756c734c6837379f50148e2 SHA1 3a7e9e81b9f4019aad643e5fe68093f185b8229f SHA256 df476e74c78d2a2c03c9619a8d90e81c60c125e7cbf514f3ff27375d8469130d
 DIST charm-5.9.tar.gz 7580639 RMD160 ebc3a8515fd918c6e0fc0fd9963a22b3ae5d057d SHA1 8b34d083486e6350ddf31a71e7476d6027ef9c0f SHA256 b5f8d53f0b447dbd720a0f2607a0e7902c227c7377326bf279e448ed570dcc89
-EBUILD charm-5.9.ebuild 3824 RMD160 32948b60f334d7b3d270ef22405b4970e6e2e02b SHA1 8ee6276ff44335d13bdd4168ef69669d33d2696b SHA256 bf8826ee18785b60a4c31b013b3a2a8d7810b57cf8ed381e3e8419e5be4a8c87
-MISC ChangeLog 3067 RMD160 699697064b7bafd5512dec8eae3dc584f3c400a4 SHA1 b0531d599a124f42ae3167b2f196b9c7c39c129f SHA256 39fc7c2da238483bf29d12d5891dfa0d6d105fc23fbd3e1845ded661dcfb91d2
+DIST charm-6.1.2_src.tar.gz 24177223 RMD160 bdd6e88a8596139303025d5ecd484a4634811dc9 SHA1 0e6cee877f22794cb647ab22ef5651048abcbbd0 SHA256 cc8a522ddf495fdd44f8134d82dfe0a17b72c2cf5962960688463d3115e8e366
+EBUILD charm-5.9.ebuild 3845 RMD160 687f92f1d0b635e53238d12a16a4b8d98bd6a68d SHA1 e2c01674c95578bac023f4aefed6f318e87ab49d SHA256 e26a5198cf66d465a5e25afe3e442fa2498737a20ece40782b72e5579c803f7b
+EBUILD charm-6.1.2.ebuild 3753 RMD160 91a9053a6c75313d2d177803c06d9b38c6bf0369 SHA1 16c10d1bac5f27c1bd63f149c13d0bdf1bb7c037 SHA256 771ec5c649b7ba4d7e5db89f161f6b58d527bc572e6c19f293b1daeeaf369104
+MISC ChangeLog 3182 RMD160 21ef1f99dfbfbffd4a8920c776212cbc68a1da12 SHA1 c68f773f6d9c1d38b0bf96a535bdb7917ef4eeb4 SHA256 28686d4c3e1cf4d24def61487013cc26610a19e5c1f5694011dd939cf096e065
 MISC metadata.xml 398 RMD160 bf40832b2220f644b2d56f653a41f047d0184b85 SHA1 9782cf178225fb5944bc6612076ff81c2512c842 SHA256 bc7d0905ab52e35d45967685ef8106826e8bfaacc7a0f58ae652fdb2b863e33d
diff --git a/sys-cluster/charm/charm-5.9.ebuild b/sys-cluster/charm/charm-5.9.ebuild
index 2cc3250bd466..d47cb4842908 100644
--- a/sys-cluster/charm/charm-5.9.ebuild
+++ b/sys-cluster/charm/charm-5.9.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2009 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sys-cluster/charm/charm-5.9.ebuild,v 1.13 2009/03/30 13:56:22 loki_val Exp $
+# $Header: /var/cvsroot/gentoo-x86/sys-cluster/charm/charm-5.9.ebuild,v 1.14 2009/05/28 00:07:38 je_fro Exp $
 
 inherit eutils toolchain-funcs flag-o-matic
 
@@ -26,6 +26,8 @@ DEPEND="
 			app-text/ptex )
 	)"
 
+RDEPEND="${DEPEND}"
+
 CHARM_ARCH="net-linux"
 CHARM_DOWNLOAD="http://charm.cs.uiuc.edu/download/"
 
diff --git a/sys-cluster/charm/charm-6.1.2.ebuild b/sys-cluster/charm/charm-6.1.2.ebuild
new file mode 100644
index 000000000000..c9fca3300d08
--- /dev/null
+++ b/sys-cluster/charm/charm-6.1.2.ebuild
@@ -0,0 +1,158 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $
+
+inherit eutils toolchain-funcs flag-o-matic
+
+DESCRIPTION="Charm++ is a message-passing parallel language and runtime system."
+LICENSE="charm"
+HOMEPAGE="http://charm.cs.uiuc.edu/"
+SRC_URI="${P}_src.tar.gz"
+
+SLOT="0"
+KEYWORDS="~x86"
+IUSE="cmkopt tcp smp doc"
+
+RESTRICT="fetch"
+
+DEPEND="
+	doc? (
+		virtual/poppler-utils
+		dev-tex/latex2html
+		virtual/latex-base
+		|| ( ( dev-texlive/texlive-genericrecommended
+				dev-texlive/texlive-latexextra )
+			app-text/tetex
+			app-text/ptex )
+	)"
+
+RDEPEND="${DEPEND}"
+
+CHARM_ARCH="net-linux"
+CHARM_DOWNLOAD="http://charm.cs.uiuc.edu/download/"
+
+pkg_nofetch() {
+	echo
+	einfo "Please download ${P}_src.tar.gz from"
+	einfo "${CHARM_DOWNLOAD}"
+	einfo "and then move it to ${DISTDIR}"
+	echo
+}
+
+src_unpack() {
+	unpack ${A}
+
+#	epatch "${FILESDIR}"/${P}-gcc-4.2.patch
+
+	# add -fPIC to generate PIC code for charm so's
+	epatch "${FILESDIR}"/${PN}-fpic-gentoo.patch
+
+	# for pdf/html docs we need to patch the makefiles
+#	if use doc; then
+#		epatch "${FILESDIR}"/${PN}-doc-makefile-gentoo.patch
+#	fi
+
+	# patch the example Makefiles so they run out of
+	# the box
+#	epatch "${FILESDIR}"/${PN}-examples-gentoo.patch
+
+	# enable proper detection of python in configure
+#	epatch "${FILESDIR}"/${PN}-python-configure-gentoo.patch
+
+	# gcc-4.1 fixes
+#	epatch "${FILESDIR}"/${P}-gcc4.patch
+
+	# TCP instead of default UDP for socket comunication
+	# protocol
+	if use tcp; then
+		CHARM_OPTS="${CHARM_OPTS} tcp"
+	fi
+
+	# enable direct SMP support using shared memory
+	if use smp; then
+		CHARM_OPTS="${CHARM_OPTS} smp"
+	fi
+
+	# compile with icc if requested (icc or icpc)
+	if [ $(tc-getCC) = icc ] || [ $(tc-getCXX) = ic* ]; then
+		CHARM_OPTS="${CHARM_OPTS} icc"
+	fi
+
+	# CMK optimization
+	if use cmkopt; then
+		append-flags -DCMK_OPTIMIZE=1
+	fi
+}
+
+src_compile() {
+	# build charmm++ first
+	./build charm++ net-linux ${CHARM_OPTS} ${CFLAGS} || \
+		die "Failed to build charm++"
+
+	# make pdf/html docs
+	if use doc; then
+		cd "${S}"/doc
+		make doc || die "failed to create pdf/html docs"
+	fi
+}
+
+src_install() {
+	# make charmc play well with gentoo before
+	# we move it into /usr/bin
+	einfo "Fixing paths in charmc wrapper"
+	epatch "${FILESDIR}"/${PN}-charmc-gentoo.patch
+
+	sed -e "s/gentoo-include/${P}/" -i ./src/scripts/charmc || \
+		die "failed patching charmc script"
+
+	# install binaries
+	cd "${S}"/bin
+	dobin ./charmd ./charmd_faceless ./charmr* ./charmc ./charmxi \
+		./conv-cpm ./dep.pl || die "Failed to install binaries"
+
+	# install headers
+	cd "${S}"/include
+	insinto /usr/include/${P}
+	doins * || die "failed to install header files"
+
+	# install static libs
+	cd "${S}"/lib
+	dolib.a * || die "failed to install static libs"
+
+	# install shared libs
+	cd "${S}"/lib_so
+	dolib.so * || die "failed to install shared libs"
+
+	# basic docs
+	cd "${S}"
+	dodoc CHANGES README  || die "Failed to install docs"
+
+	# install examples after fixing path to charmc
+	find examples/ -name 'Makefile' | xargs sed \
+		-r "s:(../)+bin/charmc:/usr/bin/charmc:" -i || \
+		die "Failed to fix examples"
+	find examples/ -name 'Makefile' | xargs sed \
+		-r "s:./charmrun:./charmrun ++local:" -i || \
+		die "Failed to fix examples"
+	insinto /usr/share/doc/${PF}/examples
+	doins -r examples/charm++/*
+
+	# pdf/html docs
+	if use doc; then
+		cd "${S}"/doc
+		# install pdfs
+		insinto /usr/share/doc/${PF}/pdf
+		doins  doc/pdf/* || die "failed to install pdf docs"
+		# install html
+		docinto html
+		dohtml -r doc/html/* || die "failed to install html docs"
+	fi
+}
+
+pkg_postinst() {
+	echo
+	einfo "Please test your charm installation by copying the"
+	einfo "content of /usr/share/doc/${PF}/examples to a"
+	einfo "temporary location and run 'make test'."
+	echo
+}