summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
-rw-r--r--sci-biology/augustus/ChangeLog7
-rw-r--r--sci-biology/augustus/augustus-2.3.1.ebuild35
2 files changed, 41 insertions, 1 deletions
diff --git a/sci-biology/augustus/ChangeLog b/sci-biology/augustus/ChangeLog
index 01cc7776104d..c74883ab47cb 100644
--- a/sci-biology/augustus/ChangeLog
+++ b/sci-biology/augustus/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/augustus
# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/ChangeLog,v 1.4 2009/10/31 17:55:20 maekke Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/ChangeLog,v 1.5 2009/11/17 02:32:03 weaver Exp $
+
+*augustus-2.3.1 (16 Nov 2009)
+
+ 16 Nov 2009; Andrey Kislyuk <weaver@gentoo.org> +augustus-2.3.1.ebuild:
+ Version bump
31 Oct 2009; Markus Meier <maekke@gentoo.org> augustus-2.1.ebuild:
amd64/x86 stable, bug #290924
diff --git a/sci-biology/augustus/augustus-2.3.1.ebuild b/sci-biology/augustus/augustus-2.3.1.ebuild
new file mode 100644
index 000000000000..db0ff398729b
--- /dev/null
+++ b/sci-biology/augustus/augustus-2.3.1.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/augustus-2.3.1.ebuild,v 1.1 2009/11/17 02:32:03 weaver Exp $
+
+EAPI="2"
+
+inherit base eutils
+
+DESCRIPTION="Eukaryotic gene predictor"
+HOMEPAGE="http://augustus.gobics.de/"
+SRC_URI="http://augustus.gobics.de/binaries/${PN}.${PV}.src.tar.gz"
+
+LICENSE="Artistic"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND=""
+
+S="${WORKDIR}/${PN}"
+
+src_compile() {
+ emake -C src clean || die
+ emake -C src || die
+}
+
+src_install() {
+ dobin src/{augustus,etraining,consensusFinder,curve2hints} || die
+ insinto /usr/share/${PN}
+ doins -r config examples scripts docs || die
+ echo "AUGUSTUS_CONFIG_PATH=\"/usr/share/${PN}/config\"" > "${S}/99${PN}"
+ doenvd "${S}/99${PN}" || die
+ dodoc README*.TXT HISTORY.TXT retraining.html
+}