diff options
Diffstat (limited to 'sci-biology/dialign-t/files/try-pthread-for-blas-lapack.patch')
| -rw-r--r-- | sci-biology/dialign-t/files/try-pthread-for-blas-lapack.patch | 50 |
1 files changed, 50 insertions, 0 deletions
diff --git a/sci-biology/dialign-t/files/try-pthread-for-blas-lapack.patch b/sci-biology/dialign-t/files/try-pthread-for-blas-lapack.patch new file mode 100644 index 0000000..d9b01ed --- /dev/null +++ b/sci-biology/dialign-t/files/try-pthread-for-blas-lapack.patch @@ -0,0 +1,50 @@ +--- psi3.orig/configure.in 2005-10-29 10:15:06.000000000 -0700 ++++ psi3/configure.in 2006-02-10 20:56:59.000000000 -0800 +@@ -333,7 +333,7 @@ + AC_ARG_WITH(blas,[ --with-blas which blas library to use],[ + case $withval in + yes) +- BLAS='-lblas' ++ BLAS='-lblas -lpthread' + ;; + no) + BLAS='' +@@ -344,16 +344,16 @@ + esac + ]) + if test "X$BLAS" = X; then +- AC_CHECK_LIB(essl, DGEMM, BLAS="-lessl") ++ AC_CHECK_LIB(essl, DGEMM, BLAS="-lessl -lpthread",, [-lpthread]) + fi + if test "X$BLAS" = X; then +- AC_CHECK_LIB(scs, DGEMM, BLAS="-lscs") ++ AC_CHECK_LIB(scs, DGEMM, BLAS="-lscs -lpthread",, [-lpthread]) + fi + if test "X$BLAS" = X; then +- AC_CHECK_LIB(atlas, DGEMM, BLAS="-latlas") ++ AC_CHECK_LIB(atlas, DGEMM, BLAS="-latlas -lpthread",, [-lpthread]) + fi + if test "X$BLAS" = X; then +- AC_CHECK_LIB(blas, DGEMM, BLAS="-lblas") ++ AC_CHECK_LIB(blas, DGEMM, BLAS="-lblas -lpthread",, [-lpthread]) + fi + if test "X$BLAS" = X; then + AC_MSG_ERROR("Did not find a BLAS library") +@@ -363,7 +363,7 @@ + AC_ARG_WITH(lapack,[ --with-lapack which lapack library to use],[ + case $withval in + yes) +- LAPACK='-llapack' ++ LAPACK='-llapack -lpthread' + ;; + no) + LAPACK='' +@@ -382,7 +382,7 @@ + LIBS=$CURRENT_LIBS + fi + if test "X$LAPACK" = X; then +- AC_CHECK_LIB(lapack,DGEEV, LAPACK="-llapack",,$BLAS) ++ AC_CHECK_LIB(lapack,DGEEV, LAPACK="-llapack",,$BLAS -lpthread) + fi + if test "X$LAPACK" = X; then + AC_MSG_ERROR("Did not find a LAPACK library") |