diff options
Diffstat (limited to 'sci-biology/probalign/files/1.3-look-in-usr-bin-for-probalign.patch')
| -rw-r--r-- | sci-biology/probalign/files/1.3-look-in-usr-bin-for-probalign.patch | 12 |
1 files changed, 12 insertions, 0 deletions
diff --git a/sci-biology/probalign/files/1.3-look-in-usr-bin-for-probalign.patch b/sci-biology/probalign/files/1.3-look-in-usr-bin-for-probalign.patch new file mode 100644 index 0000000..57d1e02 --- /dev/null +++ b/sci-biology/probalign/files/1.3-look-in-usr-bin-for-probalign.patch @@ -0,0 +1,12 @@ +diff -ur probaligngui_beta_1.3.orig/javagui/src/Frame1.java probaligngui_beta_1.3/javagui/src/Frame1.java +--- probaligngui_beta_1.3.orig/javagui/src/Frame1.java 2008-04-08 19:26:11.000000000 -0700 ++++ probaligngui_beta_1.3/javagui/src/Frame1.java 2008-04-08 19:26:57.000000000 -0700 +@@ -1042,7 +1042,7 @@ + //System.getenv("PROBALIGN_HOME"); + + //unix code +- String command = new String(basedir+"/probalign/bin/probalign "); ++ String command = new String("/usr/bin/probalign "); + command = command + filename; + + GapOpen = Float.parseFloat(jGapOpen.getText()); |