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| author |   David Seifert <soap@gentoo.org> | 2020-06-21 15:49:32 +0200 |
|---|---|---|
| committer | David Seifert <soap@gentoo.org> | 2020-06-21 15:49:32 +0200 |
| commit | 4129eb414e8ac4027b2e7c4b9445aa8075fd8dea (patch) | |
| tree | 350d92070b1b0e7bbf63365eab786990e12c7653 /sci-biology | |
| parent | sci-biology/mcl: [QA] Call AM_PROG_AR (diff) | |
| download | gentoo-4129eb414e8ac4027b2e7c4b9445aa8075fd8dea.tar.gz gentoo-4129eb414e8ac4027b2e7c4b9445aa8075fd8dea.tar.bz2 gentoo-4129eb414e8ac4027b2e7c4b9445aa8075fd8dea.zip | |
sci-biology/mcl: Fix building against GCC 10
Closes: https://bugs.gentoo.org/706530
Package-Manager: Portage-2.3.101, Repoman-2.3.22
Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/mcl/files/mcl-14.137-fix-declarations.patch (renamed from sci-biology/mcl/files/mcl-14.137-qa-implicit-declarations.patch) | 34 | ||||
| -rw-r--r-- | sci-biology/mcl/mcl-14.137.ebuild | 2 |
2 files changed, 31 insertions, 5 deletions
diff --git a/sci-biology/mcl/files/mcl-14.137-qa-implicit-declarations.patch b/sci-biology/mcl/files/mcl-14.137-fix-declarations.patch index df4309874d48..4974d352bf7b 100644 --- a/sci-biology/mcl/files/mcl-14.137-qa-implicit-declarations.patch +++ b/sci-biology/mcl/files/mcl-14.137-fix-declarations.patch @@ -5,8 +5,34 @@ Fix QA issues related to implicit declarations. * clmadjust.c:184:10: warning: implicit declaration of function ‘mcxFree’ [-Wimplicit-function-declaration] * mcxi.c:42:16: warning: implicit declaration of function ‘isatty’ [-Wimplicit-function-declaration] ---- mcl-14-137/src/shcl/clmadjust.c -+++ mcl-14-137/src/shcl/clmadjust.c +--- a/src/impala/iface.h ++++ b/src/impala/iface.h +@@ -16,15 +16,15 @@ + + /* This file currently provides nothing */ + +-dim nu_meet_can ; +-dim nu_meet_sl ; +-dim nu_meet_zip ; +-dim nu_diff_can ; +-dim nu_diff_sl ; +-dim nu_diff_zip ; +-double nu_magic ; ++extern dim nu_meet_can ; ++extern dim nu_meet_sl ; ++extern dim nu_meet_zip ; ++extern dim nu_diff_can ; ++extern dim nu_diff_sl ; ++extern dim nu_diff_zip ; ++extern double nu_magic ; + +-dim mclx_n_thread_g ; ++extern dim mclx_n_thread_g ; + + #endif + +--- a/src/shcl/clmadjust.c ++++ b/src/shcl/clmadjust.c @@ -14,6 +14,7 @@ #include "report.h" #include "clmadjust.h" @@ -15,8 +41,8 @@ Fix QA issues related to implicit declarations. #include "util/io.h" #include "util/types.h" #include "util/err.h" ---- mcl-14-137/src/shmcx/mcxi.c -+++ mcl-14-137/src/shmcx/mcxi.c +--- a/src/shmcx/mcxi.c ++++ b/src/shmcx/mcxi.c @@ -8,6 +8,7 @@ */ diff --git a/sci-biology/mcl/mcl-14.137.ebuild b/sci-biology/mcl/mcl-14.137.ebuild index 40c96e8a4b12..e7924bccec30 100644 --- a/sci-biology/mcl/mcl-14.137.ebuild +++ b/sci-biology/mcl/mcl-14.137.ebuild @@ -19,7 +19,7 @@ IUSE="+blast" S="${WORKDIR}/${MY_P}" PATCHES=( - "${FILESDIR}"/${P}-qa-implicit-declarations.patch + "${FILESDIR}"/${P}-fix-declarations.patch "${FILESDIR}"/${P}-fix-autotools.patch ) |