Fixed ChangeLog header. Fixed broken Manifest.

30 files changed, 365 insertions, 65 deletions

diff --git a/sci-biology/aaindex/Manifest b/sci-biology/aaindex/Manifest
index 08f93845ec12..62dcd8842ff7 100644
--- a/sci-biology/aaindex/Manifest
+++ b/sci-biology/aaindex/Manifest
@@ -1,4 +1,14 @@
-MD5 7e5d46b17d8c21057a79e39196f8acf3 ChangeLog 707
-MD5 2c646aebfcfeb537ca42ac037069708a aaindex-6.0.ebuild 1441
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+MD5 c1b86f6ebc7ac8318e3e2c635a4cad94 aaindex-6.0.ebuild 1447
+MD5 a463630e2d11cc22ed1f50a39edee004 ChangeLog 890
 MD5 d508af45f2137bf67613eb18d9f6f831 metadata.xml 1310
 MD5 cd3e50367768bef809d98048504b43d6 files/digest-aaindex-6.0 278
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.9.10 (GNU/Linux)
+
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+lkTn2A7uLsmwrurT45qm0ow=
+=YxOv
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl-pipeline/Manifest b/sci-biology/bioperl-pipeline/Manifest
index 6fb8c7d483b4..7cc2bc0af425 100644
--- a/sci-biology/bioperl-pipeline/Manifest
+++ b/sci-biology/bioperl-pipeline/Manifest
@@ -1,4 +1,14 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 MD5 6facd86479a1cef21fba56b2a84ffeaf bioperl-pipeline-0.1.ebuild 1970
-MD5 f478420cd92cb430ae32edeafd477677 ChangeLog 919
+MD5 e9bee4a0cf8708aa085e97041cad97c0 ChangeLog 923
 MD5 e8b4df3df76800c376905734d8043cfa metadata.xml 216
 MD5 cea8881ae00a651493915c7732732233 files/digest-bioperl-pipeline-0.1 72
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.9.10 (GNU/Linux)
+
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+qz61CcetdKe5wnguKWXrxf4=
+=+25C
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl-run/Manifest b/sci-biology/bioperl-run/Manifest
index 649d4403a8cc..7c0c446ea200 100644
--- a/sci-biology/bioperl-run/Manifest
+++ b/sci-biology/bioperl-run/Manifest
@@ -1,7 +1,17 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 MD5 9e9163c367f4b7742a9cf1e453fe2809 bioperl-run-1.4.ebuild 1314
 MD5 fcabacd9f496160cc37eb27c7e4d0f02 bioperl-run-1.2.2.ebuild 1464
-MD5 37947abb43e7358943f0a4e5eb9481ba ChangeLog 1260
+MD5 9bf8d3e766eab170ac4013b5c8851154 ChangeLog 1264
 MD5 e8b4df3df76800c376905734d8043cfa metadata.xml 216
 MD5 47db6a1f839dd45f8c891b5f6ab2ff2a files/digest-bioperl-run-1.4 67
 MD5 21ad123058f1e670f289ee1a87de4e82 files/bioperl-run-Pise-test-patch.diff 722
 MD5 b23d441d6d3f1d4ed3dead4c3dc2799b files/digest-bioperl-run-1.2.2 69
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+
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+q5N/v2XFlTj8Mtk5SJckqCI=
+=jglK
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl/Manifest b/sci-biology/bioperl/Manifest
index 971757586d13..aa8ff4081d7b 100644
--- a/sci-biology/bioperl/Manifest
+++ b/sci-biology/bioperl/Manifest
@@ -1,9 +1,12 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 MD5 0474ddca7a6b888eb2c850e7316e3a84 bioperl-1.0.2.ebuild 1493
 MD5 e999f82b53cbf1cbc605544bba4046ad bioperl-1.2.3.ebuild 2071
 MD5 646a3f1c25231076b1a0303658af1ed0 bioperl-1.2.ebuild 1542
 MD5 6a7b1568f839b8a9cd5307df99736c34 bioperl-1.2.2.ebuild 2186
 MD5 61e6def1928314eb307547c16629e268 bioperl-1.4.ebuild 1160
-MD5 163da5403a03f5d86bef2f56d316076d ChangeLog 2583
+MD5 f2eecc11377eebe2ae50860989c416c5 ChangeLog 2587
 MD5 e8b4df3df76800c376905734d8043cfa metadata.xml 216
 MD5 8f6c3beb108aaa2b78b0b4f8d218187a files/biodbgff-enable-1.2.2.patch 3355
 MD5 1828ff2ba6225e17a98d27bfbad5c7c9 files/bioperl-1.2-manpage.diff 712
@@ -14,3 +17,10 @@ MD5 08539f1d1fed6d673140cdc221ae13e6 files/domanpages-1.2.2.patch 412
 MD5 dfdb9921cbef92f60e9746a9531d8de7 files/digest-bioperl-1.0.2 66
 MD5 d8df3477f72bba80de83cfdb5416ecbf files/digest-bioperl-1.2.2 66
 MD5 a67f149bd10684a4b584bcd23282d5bf files/digest-bioperl-1.2.3 67
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.9.10 (GNU/Linux)
+
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+aMgJucZQtgqQGjvjfIedFWA=
+=i0xy
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/biopython/Manifest b/sci-biology/biopython/Manifest
index 0ca9f8710518..219c2d9b939a 100644
--- a/sci-biology/biopython/Manifest
+++ b/sci-biology/biopython/Manifest
@@ -1,12 +1,22 @@
-MD5 ad5627e2c6070c72b3878731be65a4a9 ChangeLog 1902
-MD5 821788707f864dffce2a6cbd086ec19a biopython-1.10.ebuild 808
-MD5 64f5e7ece791b5004bf111d8ea6b1e66 biopython-1.21.ebuild 900
-MD5 ebd9935ad492f703e31fccbc90cc7133 biopython-1.23.ebuild 795
-MD5 49801c45bed7033965804aae19d530ea biopython-1.24.ebuild 790
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+MD5 9370a6425b5a5049754c88006270cc4e biopython-1.23.ebuild 799
+MD5 aa60ffb1ce8a3be3a98239e5cc554987 biopython-1.24.ebuild 797
+MD5 9b9a536d060b8bfb306b175026ffe3e2 biopython-1.10.ebuild 812
+MD5 1b4dfb3214b5c8a1b8f76c685b12a736 ChangeLog 2193
+MD5 e48d0c85ce95d1b3f1574318f834657c biopython-1.30.ebuild 800
 MD5 e52ec7d225835cda2c95c5317cdccfb4 metadata.xml 217
-MD5 4eac662e68aa34df443d7e4742d32dc8 biopython-1.30.ebuild 794
+MD5 1d664ed4303ac3f2a4acd561ad066ae3 biopython-1.21.ebuild 904
 MD5 8e719491da5d9664fddedbffc6af8f06 files/digest-biopython-1.10 67
 MD5 c54d7ea5347210ae92b5e01a346e2a21 files/digest-biopython-1.21 67
 MD5 3a482a8872b4342414ac1d59b7fee4ed files/digest-biopython-1.23 67
 MD5 aab085d47ad39d35d85a70db1e1aa89b files/digest-biopython-1.24 67
 MD5 a8b300aed93e9dbec0b14e657121d00e files/digest-biopython-1.30 67
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.9.10 (GNU/Linux)
+
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+JKXoOV6CMeK2l0EGtFnO5ao=
+=uwfq
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/clustalx/Manifest b/sci-biology/clustalx/Manifest
index 84f965bc69e3..c4787ae2a941 100644
--- a/sci-biology/clustalx/Manifest
+++ b/sci-biology/clustalx/Manifest
@@ -1,4 +1,14 @@
-MD5 85d7c090d64f675746361e68fce19490 ChangeLog 827
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+MD5 be75415ba5be286df70f36a34b172bd4 ChangeLog 1013
 MD5 272b5b012593acd07a7a60b8b64e6761 metadata.xml 509
-MD5 a6bdceb4558eaaa860058204ff1448f2 clustalx-1.83.ebuild 1358
+MD5 e8a661c26eba14e8742e84ac87105297 clustalx-1.83.ebuild 1362
 MD5 800c4da737d4fb9af3d8ffb7f6f44892 files/digest-clustalx-1.83 68
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.9.10 (GNU/Linux)
+
+iD8DBQFBy32QI1lqEGTUzyQRAqMmAJ9J89SL8QlBzr0w27FKF7kGoDYzXACfaFA8
+Aj154jNLhWKuIs10otyZxlw=
+=cXZ5
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/cutg/Manifest b/sci-biology/cutg/Manifest
index d81a49b14c73..8a7f24bf9cb6 100644
--- a/sci-biology/cutg/Manifest
+++ b/sci-biology/cutg/Manifest
@@ -1,6 +1,16 @@
-MD5 e4a9cb7a750c45b5f064e0791a6db623 cutg-143.ebuild 1178
-MD5 2bb31e68b962982d6890f9636a4bac63 ChangeLog 1115
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+MD5 399fc64a5e650ab7635343dd69a42250 cutg-143.ebuild 1182
+MD5 33b4e74742384c3f2e423400e0528cbe ChangeLog 1302
 MD5 d14f29edef39d8d89b39a5787c3d141c metadata.xml 594
-MD5 3e219869a7440d22d1a3e3b6605429f4 cutg-144.ebuild 1179
+MD5 742c6f54304d54264cbe2902965d2373 cutg-144.ebuild 1183
 MD5 94ad06877dbe9065273a7ee15904c7ec files/digest-cutg-143 63
 MD5 e35ab30eae79e0600feabc028e0db162 files/digest-cutg-144 63
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.9.10 (GNU/Linux)
+
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+CGxQmjilTMk+EIBf8xrbeqc=
+=Uf7a
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/ecell/Manifest b/sci-biology/ecell/Manifest
index 19fd26fad084..1dcd22d32038 100644
--- a/sci-biology/ecell/Manifest
+++ b/sci-biology/ecell/Manifest
@@ -1,4 +1,14 @@
-MD5 d02431f646812166147a086a887aba1d ecell-3.1.102.ebuild 776
-MD5 fe92375e107e2f23451979082dcfe4f6 ChangeLog 570
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+MD5 e9e23a26e01fa188add0fd21cc5c48be ecell-3.1.102.ebuild 780
+MD5 10962402028ffe9419cfa12037502b29 ChangeLog 751
 MD5 155da428f344189ed3afe853bdd0a233 metadata.xml 354
 MD5 8f591a6f5e0c8c4c1389b02612d7c6df files/digest-ecell-3.1.102 66
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.9.10 (GNU/Linux)
+
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+rG9FoeGZFnKb4YaKWaIIm1Q=
+=/3oK
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/embassy-domainatrix/Manifest b/sci-biology/embassy-domainatrix/Manifest
index 5267307b3e2b..6fcfbb7f029a 100644
--- a/sci-biology/embassy-domainatrix/Manifest
+++ b/sci-biology/embassy-domainatrix/Manifest
@@ -1,4 +1,14 @@
-MD5 e0ba3eef22f975e9319735321a67d345 embassy-domainatrix-1.0.0.ebuild 343
-MD5 3d83e0894f6c1cb6e61e8900cb321d81 ChangeLog 598
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+MD5 72739aa1c0a939fef54518ef1b5188e9 embassy-domainatrix-1.0.0.ebuild 347
+MD5 dcc86de78615b3cd449c719f97939458 ChangeLog 831
 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
 MD5 2cfc7dc10348dc74cffc22396f14c678 files/digest-embassy-domainatrix-1.0.0 135
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.9.10 (GNU/Linux)
+
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+-----END PGP SIGNATURE-----
diff --git a/sci-biology/embassy-emnu/Manifest b/sci-biology/embassy-emnu/Manifest
index 617ce96af0e3..3acda05ce553 100644
--- a/sci-biology/embassy-emnu/Manifest
+++ b/sci-biology/embassy-emnu/Manifest
@@ -1,4 +1,14 @@
-MD5 7b995a7cf771644d6e1cda78acc6bef6 embassy-emnu-1.05.ebuild 421
-MD5 c2232f3e48a72e35adf2446991cd66db ChangeLog 558
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+MD5 2f1d4f1bb6ebc614d33407a6bb03c615 embassy-emnu-1.05.ebuild 425
+MD5 0e5084bc9e5a366d034e2b95af25fe0a ChangeLog 761
 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
 MD5 8c98ad2b52c276086d21f0ebe1e261f1 files/digest-embassy-emnu-1.05 127
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+
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+-----END PGP SIGNATURE-----
diff --git a/sci-biology/embassy-esim4/Manifest b/sci-biology/embassy-esim4/Manifest
index 97304b783591..5b5d441ef06a 100644
--- a/sci-biology/embassy-esim4/Manifest
+++ b/sci-biology/embassy-esim4/Manifest
@@ -1,4 +1,14 @@
-MD5 37d6cebb002c878e806f353ffb23d7d5 embassy-esim4-1.0.0.ebuild 355
-MD5 811e59dd852b9af1dae93dacd91a71a8 ChangeLog 570
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+MD5 7a51650650d0057c4cb2c2fa65a3db4b embassy-esim4-1.0.0.ebuild 359
+MD5 726eedd481f5a2f8e114c6063bc9c2b8 ChangeLog 779
 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
 MD5 b87bf359afdf01a0ebe6eb9454ee5ff0 files/digest-embassy-esim4-1.0.0 129
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diff --git a/sci-biology/embassy-hmmer/Manifest b/sci-biology/embassy-hmmer/Manifest
index 1ee0760f3092..f2c1a2cf3f39 100644
--- a/sci-biology/embassy-hmmer/Manifest
+++ b/sci-biology/embassy-hmmer/Manifest
@@ -1,4 +1,14 @@
-MD5 821801c526850de96e257f4a15c3cff3 embassy-hmmer-2.1.1.ebuild 459
-MD5 31b46abbb717192b9ffae7196004b3fb ChangeLog 570
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+MD5 a06b09853be4cdd307b886d8debc70a7 ChangeLog 779
 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
 MD5 b7e391c2b88024ccda59423a5ed6598e files/digest-embassy-hmmer-2.1.1 129
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+
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+-----END PGP SIGNATURE-----
diff --git a/sci-biology/embassy-meme/Manifest b/sci-biology/embassy-meme/Manifest
index 74869864cdef..307ed8457865 100644
--- a/sci-biology/embassy-meme/Manifest
+++ b/sci-biology/embassy-meme/Manifest
@@ -1,4 +1,14 @@
-MD5 a1a148a0b587340bc70dc5a40e98bab4 embassy-meme-2.3.1.ebuild 450
-MD5 c90a6e14368e8d7760001d4daf8502fd ChangeLog 562
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+
+MD5 af92944529d2a7071cc7ff6dbefbcbef embassy-meme-2.3.1.ebuild 454
+MD5 74ff2f23379248eef6744ba5520e06cb ChangeLog 767
 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
 MD5 6ddbec984e29722772a407da4e7c78fa files/digest-embassy-meme-2.3.1 128
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diff --git a/sci-biology/embassy-mse/Manifest b/sci-biology/embassy-mse/Manifest
index 53639f742ea2..1fc1f3e19e8b 100644
--- a/sci-biology/embassy-mse/Manifest
+++ b/sci-biology/embassy-mse/Manifest
@@ -1,4 +1,14 @@
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-MD5 22d4cbe8274011e80743f07e7c7ad20f ChangeLog 556
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 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
 MD5 8aaa31651efb9c373a4966e8b14b1624 files/digest-embassy-mse-1.0.0 127
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diff --git a/sci-biology/embassy-phylip/Manifest b/sci-biology/embassy-phylip/Manifest
index 10a1ddf745d2..27284472a5cf 100644
--- a/sci-biology/embassy-phylip/Manifest
+++ b/sci-biology/embassy-phylip/Manifest
@@ -1,4 +1,14 @@
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-MD5 f0ccb279df7318a5807ac5b930ce0893 ChangeLog 576
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 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
 MD5 a2da9004f85665295ba90fe9b08c7025 files/digest-embassy-phylip-3.57c 130
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diff --git a/sci-biology/embassy-topo/Manifest b/sci-biology/embassy-topo/Manifest
index 0bc6372892fa..36fda76aec62 100644
--- a/sci-biology/embassy-topo/Manifest
+++ b/sci-biology/embassy-topo/Manifest
@@ -1,4 +1,14 @@
-MD5 49196b7cf76587cf2d93bd232f0a0ed6 embassy-topo-1.0.0.ebuild 349
-MD5 fdd7cd05c15c3dded2f5e281600c1fe8 ChangeLog 562
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 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
 MD5 35afa04feaa0f7925996c31a6014d543 files/digest-embassy-topo-1.0.0 128
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diff --git a/sci-biology/embassy/Manifest b/sci-biology/embassy/Manifest
index 543d20cb0b60..d10182a1e39c 100644
--- a/sci-biology/embassy/Manifest
+++ b/sci-biology/embassy/Manifest
@@ -1,4 +1,14 @@
-MD5 e18c9150d32616774a4aaefa9e1aced2 embassy-2.9.0.ebuild 1018
-MD5 5aed4847e95f55a662fb8f1b5947c61f ChangeLog 630
+-----BEGIN PGP SIGNED MESSAGE-----
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+MD5 607fa46a615e03e6962af092105317ba embassy-2.9.0.ebuild 1022
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