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authorOlivier Fisette <ribosome@gentoo.org>2005-12-08 19:52:39 +0000
committerOlivier Fisette <ribosome@gentoo.org>2005-12-08 19:52:39 +0000
commit7a7a12218430820508787677d7c9316053488bb0 (patch)
treeb65085f2b24c64a4431624583aa83cadff41ed7c /sci-biology/t-coffee
parentAdded a warning regarding an internal compiler error (see bug #114745) (diff)
downloadhistorical-7a7a12218430820508787677d7c9316053488bb0.tar.gz
historical-7a7a12218430820508787677d7c9316053488bb0.tar.bz2
historical-7a7a12218430820508787677d7c9316053488bb0.zip
Pruning old version
Package-Manager: portage-2.0.51.22-r3
Diffstat (limited to 'sci-biology/t-coffee')
-rw-r--r--sci-biology/t-coffee/ChangeLog5
-rw-r--r--sci-biology/t-coffee/Manifest4
-rw-r--r--sci-biology/t-coffee/files/digest-t-coffee-3.181
-rw-r--r--sci-biology/t-coffee/t-coffee-3.18.ebuild49
4 files changed, 5 insertions, 54 deletions
diff --git a/sci-biology/t-coffee/ChangeLog b/sci-biology/t-coffee/ChangeLog
index f714e7bf985b..ca1dfe82adb0 100644
--- a/sci-biology/t-coffee/ChangeLog
+++ b/sci-biology/t-coffee/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/t-coffee
# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.11 2005/12/08 19:48:52 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.12 2005/12/08 19:52:39 ribosome Exp $
+
+ 08 Dec 2005; Olivier Fisette <ribosome@gentoo.org> -t-coffee-3.18.ebuild:
+ Pruning old version.
08 Dec 2005; Olivier Fisette <ribosome@gentoo.org> t-coffee-3.27.ebuild:
Added a warning regarding an internal compiler error (see bug #114745).
diff --git a/sci-biology/t-coffee/Manifest b/sci-biology/t-coffee/Manifest
index b31b3ece9344..ba99692760c7 100644
--- a/sci-biology/t-coffee/Manifest
+++ b/sci-biology/t-coffee/Manifest
@@ -1,8 +1,6 @@
MD5 6fb318682c83d5a0f5d956f5272a66c6 t-coffee-2.66.ebuild 1142
MD5 14f801a8843f6bd12714937cd1b623b2 t-coffee-3.27.ebuild 1735
-MD5 5ce8de4bef54a9ec4985afe372813566 t-coffee-3.18.ebuild 1478
-MD5 58bef71f2788af8f93540c409df9a5f0 ChangeLog 1816
+MD5 a8e10e03e808c4708b17b4568bd52f10 ChangeLog 1916
MD5 0bbfd32ca9864625c55ab6460dbbd963 metadata.xml 755
MD5 ed78ff61d489ff54debcffde53dca64e files/digest-t-coffee-2.66 87
-MD5 1b980450cd09068868ab6fc2868cd19e files/digest-t-coffee-3.18 87
MD5 7a6ff5d9984814b20d79e15e0e300b63 files/digest-t-coffee-3.27 87
diff --git a/sci-biology/t-coffee/files/digest-t-coffee-3.18 b/sci-biology/t-coffee/files/digest-t-coffee-3.18
deleted file mode 100644
index 18345cb2e017..000000000000
--- a/sci-biology/t-coffee/files/digest-t-coffee-3.18
+++ /dev/null
@@ -1 +0,0 @@
-MD5 e671383b9e6b90ded56c615acd2f51c4 T-COFFEE_distribution_Version_3.18.tar.gz 1540558
diff --git a/sci-biology/t-coffee/t-coffee-3.18.ebuild b/sci-biology/t-coffee/t-coffee-3.18.ebuild
deleted file mode 100644
index c3abe7f0a6b0..000000000000
--- a/sci-biology/t-coffee/t-coffee-3.18.ebuild
+++ /dev/null
@@ -1,49 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-3.18.ebuild,v 1.1 2005/10/19 23:54:54 ribosome Exp $
-
-inherit toolchain-funcs
-
-DESCRIPTION="A multiple sequence alignment package"
-LICENSE="t-coffee"
-HOMEPAGE="http://igs-server.cnrs-mrs.fr/~cnotred/Projects_home_page/t_coffee_home_page.html"
-SRC_URI="http://igs-server.cnrs-mrs.fr/~cnotred/Packages/T-COFFEE_distribution_Version_${PV}.tar.gz"
-
-SLOT="0"
-IUSE=""
-KEYWORDS="~ppc ~x86"
-
-RESTRICT="nomirror"
-
-DEPEND="sci-biology/clustalw"
-
-TCDIR="${WORKDIR}/T-COFFEE_distribution_Version_${PV}"
-S="${TCDIR}/t_coffee_source"
-
-src_unpack(){
- unpack ${A}
- cd "${S}"
- sed -e "s/CC = cc/CC = $(tc-getCC) ${CFLAGS}/" -i makefile || die \
- "Failed to patch makefile."
-}
-
-src_compile() {
- make all || die "Compilation failed."
-}
-
-src_install() {
- cd "${TCDIR}"/bin
- dobin t_coffee || die "Failed to install program."
- insinto /usr/share/${PN}/lib/html
- doins ${TCDIR}/html/* || die "Failed to install HTML documentation,"
-
- dodoc ${TCDIR}/doc/README4T-COFFEE || die \
- "Failed to install basic documentation."
- insinto /usr/share/doc/${PF}
- doins ${TCDIR}/doc/t_coffee{_doc.{doc,pdf},.pdf} || die \
- "Failed to install manuals and articles."
- doins ${TCDIR}/doc/*.txt || die "Failed to install documentation."
-
- insinto /usr/share/${PN}/example
- doins ${TCDIR}/example/* || die "Failed to install example files."
-}