x86 stable wrt bug #539426

Package-Manager: portage-2.2.18/cvs/Linux x86_64
RepoMan-Options: --include-arches="x86"
Manifest-Sign-Key: 0xA188FBD4

12 files changed, 52 insertions, 58 deletions

diff --git a/sci-biology/bioperl-db/ChangeLog b/sci-biology/bioperl-db/ChangeLog
index a5a879042224..d007f127aba2 100644
--- a/sci-biology/bioperl-db/ChangeLog
+++ b/sci-biology/bioperl-db/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/bioperl-db
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.11 2014/08/09 22:47:12 zlogene Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.12 2015/04/26 16:10:17 pacho Exp $
+
+  26 Apr 2015; Pacho Ramos <pacho@gentoo.org> bioperl-db-1.6.9.ebuild:
+  x86 stable wrt bug #539426
 
   09 Aug 2014; Mikle Kolyada <zlogene@gentoo.org> bioperl-db-1.6.0.ebuild,
   bioperl-db-1.6.9.ebuild, bioperl-db-9999-r1.ebuild:
diff --git a/sci-biology/bioperl-db/Manifest b/sci-biology/bioperl-db/Manifest
index c3b1d1dd00ea..2c4979765daa 100644
--- a/sci-biology/bioperl-db/Manifest
+++ b/sci-biology/bioperl-db/Manifest
@@ -1,19 +1,17 @@
 -----BEGIN PGP SIGNED MESSAGE-----
 Hash: SHA256
 
-DIST BioPerl-DB-1.006900.tar.gz 492799 SHA256 50df2447b7f3e26aebcf02ed7344d3ef562c3f5393c1584a8ae086185c8c9139
+DIST BioPerl-DB-1.006900.tar.gz 492799 SHA256 50df2447b7f3e26aebcf02ed7344d3ef562c3f5393c1584a8ae086185c8c9139 SHA512 e06b8b9aa4188a83128f910d7b4a031f69d36f75e4f2d7210357366379024ef39b58eca97112b5b419f141c82b7518086273cc97c9637382ee5e0ddb9ce28746 WHIRLPOOL b484ce9f464a7189e5b2fffd6facdd426e8b9009ffca5e1661986490bc45dc0269faec5e9eeebdb23ec5c706f62a670fbb6bfc5a60b11c268c7e6f34bf1f03f2
 DIST BioPerl-db-1.6.0.tar.bz2 296041 SHA256 81710b9c6d021511b8ad19d106309f76ef3111015873a56af9b109902d24a699
 EBUILD bioperl-db-1.6.0.ebuild 935 SHA256 67841aed2cdc99f42d9596dbdafbac980594d71a455ddbd370167095704ac657 SHA512 7ec3027c834c1a0704ba8e101da080ef1416da68ae0eabe089231889806eb15fc7a0b6f4f533a120b9b88ea5a3b47c24b4f21d7abe00d0ed8c4d21af087e47c3 WHIRLPOOL 4934f5410d82387bdb115a2ecc018f08b3eaf9f26c094ee78d909fc20484bdaa915f71e9dcc6f624688476e7ed3c0f460c62a91fda01b56c5c26decde2e15765
-EBUILD bioperl-db-1.6.9.ebuild 762 SHA256 beba5a93c3a144b7ea36cc0fa552a3887550f761e2dd35c7a919c1b1352edc60 SHA512 296a85d250ab59fa8f53b6f595560de56076accf394e64a77faea6d1cf5d8af793df11a16ae011522207deaacbc6a3a320a03326bc2caefd813bd25789500b1d WHIRLPOOL d4f03a77947b16210193ff36db7604f1c6ff5ab83218ba5622540c1974dbc2da529e3626ea951827842553f695a072e4036aea271521fc256895bfca80588023
+EBUILD bioperl-db-1.6.9.ebuild 759 SHA256 06789d1918cf9abe9cada73002ba04b22d4aa214b586a1f12419c5e5ac47e531 SHA512 4978ae8c26b1fb240009fef055b18e8992f95e816d1f40af6627382e7ce333a0d813511aecaef0481e94be9b798b702b0abae309849b7289b102856528094d71 WHIRLPOOL c183bf072b1ce9b75bf5124e8b8431a51b93ef4c9d3c3d7e063b6546edce0976e5e02975c3f47f5f0e6b8f967ca4e2c7981df928fdbfe23fb55e4245dccb8745
 EBUILD bioperl-db-9999-r1.ebuild 975 SHA256 b6e138022894860c8b40bb8c1341dd8d031c41b43305f8bab9f3261c72b8bebb SHA512 582954d290ee5b6eb8decad3d2f18f95e2ee9280f909be1ca4222f12fe016d03e47841b5ce66bd1c12c85a64b46e9cf19836b8501d23e6157a909daabcbc9945 WHIRLPOOL 2500389084e7ae3937de7d2676f823f61793cc86849acb91c678e2623723bde36d6cb84c42dccde2a95352291515dcc499b37311e0b47fd67eeb34be824bf94b
-MISC ChangeLog 1830 SHA256 7e95e35ba2ce0923679a851683c0508d48940a23bc24218a387cdf37e1ecec4b SHA512 416bcf915e04cc6da9e4088f8f9a4502895d0cdcfc55353b0bd27cefe05724150732631d5e3c7d95b3176a35170c79de7e5febc6703a086a513333a80f8278dc WHIRLPOOL 27ca29e315c3e4a430d25c7ca6a143e0399751ae11ffabb41414894d24aa58f0678019c5505c73639d97d092f22477bb4dc78a755619e295943582d2d1d6becc
+MISC ChangeLog 1929 SHA256 d949b992890a9190732c1beafd64d37e60be906b65ba9fc4011acbcb869d2d87 SHA512 f4932e0595cc038e2a4dccd5b0a036ea3f3479bfb79dd6edbdd9d9011d97ef53682ea3af102d4537b98e8cb1d9b515f6ec9e30a6fe51cd28829ffd51d5d3a19c WHIRLPOOL 5d60da265483ca10c4a74fefb6e7c6e84aefedf4190159db1f61655332b1b06944da7a603efc6d3f506703ca85f1088ffc92ea8393c06126112dbb11b2687c3a
 MISC metadata.xml 243 SHA256 caaade52752dd9332b4b9a7d233b1ea13357b98591091b09297f57407d9bf55d SHA512 43432ecd4c8101878bf4f42adf279128df74e0d0129c0f178658104d5c60e9938f270cbdd8760d0e000b95a11fcf7d1cba8a58ac0af7a1e595bdfd4761e84dac WHIRLPOOL 7de11b5857df86f15986efd61327090d4112ee9b975680dde9db7c716e760623e2ca114d781205f978aa175657ad4e54ad26a1e15d820c43b479b4957d9030c9
 -----BEGIN PGP SIGNATURE-----
 Version: GnuPG v2
 
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-=QAwf
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+pJMAniQYsx/hgQxDWPjnUAmZiYQWctbs
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diff --git a/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild b/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild
index b84040b01c4e..6a63b1213583 100644
--- a/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild
+++ b/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild,v 1.3 2014/08/09 22:47:12 zlogene Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild,v 1.4 2015/04/26 16:10:17 pacho Exp $
 
 EAPI="5"
 
@@ -15,7 +15,7 @@ DESCRIPTION="Perl tools for bioinformatics - Perl API that accesses the BioSQL s
 HOMEPAGE="http://www.bioperl.org/"
 
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64 x86"
 IUSE="test"
 SRC_TEST="do"
 
diff --git a/sci-biology/bioperl-network/ChangeLog b/sci-biology/bioperl-network/ChangeLog
index 63946669a138..9d4d75eb3b88 100644
--- a/sci-biology/bioperl-network/ChangeLog
+++ b/sci-biology/bioperl-network/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/bioperl-network
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/ChangeLog,v 1.10 2014/08/09 22:48:22 zlogene Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/ChangeLog,v 1.11 2015/04/26 16:10:10 pacho Exp $
+
+  26 Apr 2015; Pacho Ramos <pacho@gentoo.org> bioperl-network-1.6.9.ebuild:
+  x86 stable wrt bug #539426
 
   09 Aug 2014; Mikle Kolyada <zlogene@gentoo.org> bioperl-network-1.6.0.ebuild,
   bioperl-network-1.6.9.ebuild, bioperl-network-9999-r1.ebuild:
diff --git a/sci-biology/bioperl-network/Manifest b/sci-biology/bioperl-network/Manifest
index b06969dae1b5..ced1c9990118 100644
--- a/sci-biology/bioperl-network/Manifest
+++ b/sci-biology/bioperl-network/Manifest
@@ -4,16 +4,14 @@ Hash: SHA256
 DIST BioPerl-Network-1.006900.tar.gz 2198089 SHA256 5b31ab7d048ee8e7bd6ba933f96b904d7ee06b46ab29c00276eca3513a77c32a SHA512 d0a95af17cb024cbc615c784f1dbcddd7bfc5b54524163ab127f1077ded18df222fe067c085f3dd17dd416d6417b8f726526be164e1e33144991393f6b6d5842 WHIRLPOOL 65ff9e2509c0136232b7cff1aa5e8ad55f26241f51e70e6d34f9383c0af4bfdb0c5358b1a69075d480e9e1fdfa19342058fbe33ea4d4a633220ef3a80d6ed984
 DIST BioPerl-network-1.6.0.tar.bz2 902029 SHA256 1f9e48d7bf1b563fef235eede9524f8446a0374b65c6bf522f3203ed61164cb3
 EBUILD bioperl-network-1.6.0.ebuild 781 SHA256 bf65f52817faa3460e1ce45574f5ec9c7b5407ae38ec60953f895bc5cad75282 SHA512 f7f34ddea8ae1ddcff267082bfb0b358184d03dc1c719d4d817b715236389a4f02a5f08286518a3dadf499f0e4be40ef4221216e7d7f022f61d1b0b93cafb515 WHIRLPOOL ea2068203160bc4c3631490edf824d08b313ab3dd4433b1c7196249b1cb644858c0652b7db44fce114d8e8cb9933194ab5f7a298ceb8454f0257cef315c86bca
-EBUILD bioperl-network-1.6.9.ebuild 748 SHA256 fe66b75ca3943e518b73acabce5f231b8de2f9bac07a63dad8efb60832a7bf02 SHA512 f24d0b55cef953476f35582556d22020979df35be459f2c13481f709901904492f7a31edd929bab7a681173afb9c05536ee59957d41120d8448bff668180c26d WHIRLPOOL 900dd0d8d045f449db7e623eca145f8a323e44b02f84e30e99f7f240a979c6861248e9e42a7c19f7038954d981760edcfe75e36264d2299dd85e71fff271ec34
+EBUILD bioperl-network-1.6.9.ebuild 745 SHA256 eadea0fbd26fa83ffc169397ea381023862b1024e779eff4634d0eb5a4ad491f SHA512 3e90a782054c5f99ae63d04d7aaa883cde92fa1a23f32c7027f4bc21df271b3f172c4d52d9df6d4df3b232b47b2aa5652f99a35fd863e111b2a6b3f04a6e9ce4 WHIRLPOOL bfbd449a94329c2dc797e1c3a2f6dd799cb2a6b993cedf0a06cfe77d25c19e2d34951bc3c7a9ca4d1188e02df3972cf64b2e26eebeac0d3acfc880c021f1c874
 EBUILD bioperl-network-9999-r1.ebuild 816 SHA256 eb951e17bcd4981414298a748f987260565ce555e691b4b84659811eac15c325 SHA512 2bbab52c65518b555fd50c0a0d0d7e4881559813c2c46e3f361d38ceda9c507d124c448e1aaf139941cb5e2a24e6c97bd103df3880c248c621161b4656b398ba WHIRLPOOL 1772b353b306f21fb7184affe99dbf8afc54c456fb36be05b19c12ad57387bb8d8ade6e794a45c9f56af83ccd7c25cfdcba8d03e61122d6a7a0d28013ff95904
-MISC ChangeLog 1809 SHA256 4a0c59ce68815692feb61e3ac35188c7b7f6693bc0b9196a09224ef77da1cbf2 SHA512 29af5b0010762457503ca2dfd8aad3ec21ed14ff978e0b507b3a7b77e391b11a2cbbeab40737d89e46538e0a48d63ca943d0ca5f6b7b7b7ca46850582d6c08df WHIRLPOOL 46d3730ce8dcc9f8ca4c49540f73c65a28d80c3bebc145e2c0ce1a5f79bcf9738b46dc647f7ce9d4bf6290f9306fe1f72fe1d9e6d5b0ed3fa3222869851d0e79
+MISC ChangeLog 1913 SHA256 6572b253dca2b22b75de439d85295adfe082a94bfc85c37444994a1c0a762b3b SHA512 5506c0341775dc4e540c84bad12637a90a94ac7e3e063eb6a1c7c079fafe8c30a8d3521116ea0325c7ab66af870d58de2bb6d3a4db3f7ee35339dfa13ccf19f3 WHIRLPOOL 4396922de3786ba1738dfc57884fbf507976ca1a4a4f30122b48c7ebed8eb7be399f5102666be94ccb41907de878d225227bcb16c72c75d42c7618dadb07ec91
 MISC metadata.xml 248 SHA256 dbfd5f643fae0df4baa7271ae0029203db6b1c3a3ab9774ec1b9cba26ab3c2cd SHA512 13b45d68789a04b4253bcbd9d10883c1eb3256657a67df00827c7c6e9e4853dbf8a670eb88e674d84a2790bc8c9aa4f5ce55ff7478eb7d261011bf6f573719b9 WHIRLPOOL 684409333d8a43c27c5c86816e1def48384ecd85353f381cc98122477a4e91bfae7e071cf3754727651b70adc6a5f9258e2d78f3689bdf6e2db2db8e72c30859
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diff --git a/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild b/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild
index bc5277b61d29..39592c139814 100644
--- a/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild
+++ b/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild,v 1.2 2014/08/09 22:48:22 zlogene Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild,v 1.3 2015/04/26 16:10:10 pacho Exp $
 
 EAPI="5"
 
@@ -15,7 +15,7 @@ DESCRIPTION="Perl tools for bioinformatics - Analysis of protein-protein interac
 HOMEPAGE="http://www.bioperl.org/"
 
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64 x86"
 IUSE="test"
 SRC_TEST="do"
 
diff --git a/sci-biology/bioperl-run/ChangeLog b/sci-biology/bioperl-run/ChangeLog
index 7b484e3eefc7..4c6fd9ed631c 100644
--- a/sci-biology/bioperl-run/ChangeLog
+++ b/sci-biology/bioperl-run/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/bioperl-run
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/ChangeLog,v 1.25 2014/08/09 22:49:45 zlogene Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/ChangeLog,v 1.26 2015/04/26 16:10:03 pacho Exp $
+
+  26 Apr 2015; Pacho Ramos <pacho@gentoo.org> bioperl-run-1.6.9.ebuild:
+  x86 stable wrt bug #539426
 
   09 Aug 2014; Mikle Kolyada <zlogene@gentoo.org> bioperl-run-1.6.1.ebuild,
   bioperl-run-1.6.9.ebuild, bioperl-run-9999-r1.ebuild:
diff --git a/sci-biology/bioperl-run/Manifest b/sci-biology/bioperl-run/Manifest
index 29143c946890..e0484203ebca 100644
--- a/sci-biology/bioperl-run/Manifest
+++ b/sci-biology/bioperl-run/Manifest
@@ -5,16 +5,14 @@ AUX bioperl-run-Pise-test-patch.diff 722 SHA256 84c8280f8d3af311b53c8b6edd4e6ffa
 DIST BioPerl-Run-1.006900.tar.gz 14546677 SHA256 6eddca8aae38a139caaa0b28505e2ff3e919e8ed39b7539a662b0145f1f08d96 SHA512 47f2b853885c604291ac0aba3269b897de59cf7da6f7d54a50ff950cca836338091309df550f32695159c620be23391306d0421d2bbc22eebbb61a9e280ad83c WHIRLPOOL a671180b3680d94683e771ba661e0f86430814200efcd8df1552dbc3c30228d90ea8be1b47cc36603cbfc6eadacb276414ae6d79e30ec80495fd836eb1732cca
 DIST BioPerl-run-1.6.1.tar.bz2 3968370 SHA256 16f406d196b6e6d063f4ef518161571ea27909c5b47184d9eddf1eb9da147f53
 EBUILD bioperl-run-1.6.1.ebuild 1106 SHA256 2640705edf4ed4473de5ae43acabf8316db7bc51baf7b4fe350ead210cc5ab8e SHA512 8060992e922dbc0e689eab2ec36360e956782f4a5677ae3f87a2b39861f01f6c02cbbbbf2e89d895fe0eeade68ddc44cc571d878198ffe3533ab941baabf1467 WHIRLPOOL 89327927791fd8f932f347375b27c3c292ba34d503f6724c362f19a73b2722a8e21437d1187a98bc45a4ab38172165c149255b06847f6c5ed6ab2dae13166831
-EBUILD bioperl-run-1.6.9.ebuild 1091 SHA256 2a584c88e4c3841af2b938488eba10f1ae6615c98753ff9071c218db78f34d2f SHA512 8a9b4f4921215ff90f11236d20af3b43ce8b82851fcea29a8f582ca197642bb57bd375309768bd2a08fb2456b10f0c0fb38878e668bca949f16e5c99a459d44f WHIRLPOOL 401f9153da9af33e541617f2060ba0603dc1936963350b33b236e628679305765cd6e5ecde17f1d6fe3686870df1c25fb7d3247eaf97a9fe97a0184776630300
+EBUILD bioperl-run-1.6.9.ebuild 1088 SHA256 6e725fb738d0e0b1406d3935f7920065f70948451235c19af104f80050af7388 SHA512 fe8d41413d664564bd0143147e3ebcf3c403d45884634e8442ab99317749995182cb0819812ef58afa77dcffbe48c66d3f890743b8fb37f4cc028002b98df9f3 WHIRLPOOL 9bdca21d6306ebb007c654eeb736fd9a4d75316ceddf8778c839d7d0abcbe47fc8371330e5750d654a2828afc2cf1fcd094f8a90fbabd39505234d0228c4f2d9
 EBUILD bioperl-run-9999-r1.ebuild 1124 SHA256 ae3731d4ac16ba293b0a9e04e85e11d8d577f7dbdf395de2058fe61fa8699afb SHA512 9892d3db721583a055e8e684b95bebcdc4bf04bb179d6707b009afb8195a0b5535d02ff1a4ffb5cf506fdbff8706a6f5cb2fccb936254f327350e64a9904eaa2 WHIRLPOOL 2ccdf58b4090114df96d3bb594453e27b5ce56c65166b8a0c3b64692bcfab25f6846af7e144d65b7ffbf3d43c2a5c0ae7c1efb2112048fe1d7e664ebf9ba8d87
-MISC ChangeLog 4412 SHA256 72f1f3059d91c624acae532312d0d0ea65dcc59335e4301c69c9aa62249e4ec6 SHA512 a71521e0f10a14713c511b68ae45bdcd22351409cbad6c3ea2d9315a2e42b552532e45c1025a4f77840036e9aa3a0fd2cfb56391b8cac7ad131a468cb4091570 WHIRLPOOL 68b5bd61ceaf534de27125995e583d2271dcdc6e7ba6be5d0856a3b63fa89f6c5ead1271aa4861eb30a5141a1af6629082330e7c0a4e786b457c8c7fe4ec7408
+MISC ChangeLog 4512 SHA256 133b64f5e7ad243b16da594d85abec0e49a58600face3b4a7237de9314cfa358 SHA512 a566808d356cc1418af5d156946bcde406c009781b62259561f7db391d69ffb3ce76c0d0d2bffcdb93d0b23b5f684e74f9c4a45fd52a2f809cc45af60862da93 WHIRLPOOL 0aed9b2ba10f15377d693c0a9c8b89a9966fef0a5c328576232e2bd84dab5e92eecf213ab94af4bb1ec110437e091606d3463b8a22c3767262341f87e589976e
 MISC metadata.xml 239 SHA256 60082888c0555ed9bf001256819cf779438504bbc38afac272bc4bb696eed6a4 SHA512 e25122619624257aa7caf3c4a456c9f404dae487091dc1e250425463a4cf8ad8eabc259f607e49362de3906eabcd0ded1aa5861126d35c08ff8a6cd65b87c3d4 WHIRLPOOL 85438f199a1834d64deebd761b736accedc8ca6788b808affd1d9f8f278ec8e80251c4e1d500aaf69639d4601aa695d4cf733b8b1e59951683c8c86aa2146dc6
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diff --git a/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild b/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild
index 7c8cd5c20591..e512f0666d98 100644
--- a/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild
+++ b/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild,v 1.2 2014/08/09 22:49:45 zlogene Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild,v 1.3 2015/04/26 16:10:03 pacho Exp $
 
 EAPI="5"
 
@@ -15,7 +15,7 @@ DESCRIPTION="Perl tools for bioinformatics - Wrapper modules around key bioinfor
 HOMEPAGE="http://www.bioperl.org/"
 
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64 x86"
 IUSE="-minimal test"
 #SRC_TEST="do"
 
diff --git a/sci-biology/bioperl/ChangeLog b/sci-biology/bioperl/ChangeLog
index bf33f84f1b19..a6a76a0dc2b2 100644
--- a/sci-biology/bioperl/ChangeLog
+++ b/sci-biology/bioperl/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/bioperl
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/ChangeLog,v 1.56 2015/04/18 18:29:09 dilfridge Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/ChangeLog,v 1.57 2015/04/26 16:09:56 pacho Exp $
+
+  26 Apr 2015; Pacho Ramos <pacho@gentoo.org> bioperl-1.6.9.ebuild:
+  x86 stable wrt bug #539426
 
   18 Apr 2015; Andreas K. Huettel <dilfridge@gentoo.org> bioperl-1.6.9.ebuild:
   Use REQUIRED_USE instead of dieing on invalid use-flag combination, bug
diff --git a/sci-biology/bioperl/Manifest b/sci-biology/bioperl/Manifest
index 9c2c886c9927..9d46b48026ee 100644
--- a/sci-biology/bioperl/Manifest
+++ b/sci-biology/bioperl/Manifest
@@ -4,26 +4,14 @@ Hash: SHA256
 DIST BioPerl-1.6.0.tar.bz2 5640786 SHA256 50a35b1b2552c8f54c83f2bbba7b36264e94443374b86b389208437c8cae3bf6 SHA512 eb784459e0c735a5864fdb9301148a88e111ed73aa6f01f74711f2414a3341b9bc5d4187a327b5a5f10de7c92cbdfe9654c63dcc5dc3b70f5936a10f1a8e308b WHIRLPOOL 058bc7eacf6b850fed75c32336b1bb7e0fdccf93339533cf13c60047facc3219783a68304b84397ad643efea0d25333dc66aeca6cfbfe051c760025262234f3d
 DIST BioPerl-1.6.901.tar.gz 12284856 SHA256 8c74bde900222ce3926491ee103997c841c8755148c8dcaf0be1abfd61c5ac01 SHA512 227387437c940da1435ed83fad6ec2168ca12a729c90dc557e84750c6474213874c23a8f23e50db4027909469627baee581faa11be6208c8e0a5453a01c7eca4 WHIRLPOOL feb1f93a617e0135ab84b0eeb36ac986e817ce76ada0f40518090f6a480fbb1047339b33fcd11ccff444f89c4a06c41b5abaab66b662a50f17ae34f9b22d66fd
 EBUILD bioperl-1.6.0-r2.ebuild 1814 SHA256 c389353b17a201cff52c738ed3a944d162aab931c53ced4d05f56f24dfd98bf2 SHA512 0d30c36568344bf096b88e2e4ce94f59a6d0d978255c3b038be65caf84d7a44457f620b232115e642b53a4ff322065fb107c0ef4fe06305792f42f1b90688a79 WHIRLPOOL 4c81acd8a0b3a08f757e77f64ff6b10b4a6a8959d394c9a8be5f310af8d9e0de4b6613ce039f7fdc7830a477574f2e21b0e849d7f3fae992c3bf44dbc80e9e8d
-EBUILD bioperl-1.6.9.ebuild 1668 SHA256 cd31ddf56509d4f941e72a0e0402cb103cb19449acb0271d8b02a20b42514076 SHA512 a3514d023e963f10beda29cd81cbca52143a09d4f81e6c682e56d33821fde281355842a7422019c378d73549477ce5673f9cde1683bc3bbaee1757d849842881 WHIRLPOOL cb2491bdb4c1764011fa440cd8a5524faca4c93e978fd956faa12decba456707bf535c4d794ea2506115105b344e6f56f9fd1b855b527913aea5d82b6640f707
+EBUILD bioperl-1.6.9.ebuild 1663 SHA256 0a9054f73ca6b8e0393bab8c92b9db2b677d4d81ce0482f17c8632e3210a6c1a SHA512 520f6adf7520bd69634e376bf31201171055f2a5db742056ac58786ce7650528eb2b7bae36875f86befa2d4ebe90c1a356da457bdd6b6d6d2d833d0e16d9795a WHIRLPOOL 89b4b296a093ba4bca4c7491a04b34cf0709dd618eaa2e6eb9f95f936fc8d74f3e9bd5e9096f8a9c875427f3b0c8c16c60b9c38ee8afd32c8f2fb273b7f7060f
 EBUILD bioperl-9999-r1.ebuild 1951 SHA256 846d6fc690a4b8b980ee2e76e731fd9947c746f9460ac5aae7403ec3959deaac SHA512 76e96ed370775d52c0046e1d1d5e4bcbadc83baee8c053e93cda243aed85e41b8fe5b0a9ccfb11cacea5ba359d8b4928ea2a3dc7d415511d4c45605887a53ab0 WHIRLPOOL 2ac566fbf3d3ea585ba7a26ede6231bbbd4031d9663c134eebdcc40bb39733766f7cc391cb18dde3b82971bfe291d7abfd12a5fb3691abd12f3cb30f7cd494a2
-MISC ChangeLog 9617 SHA256 7283adba4d5b36b5cef367dc155033333d9f981cb5a127a84d361de14c05d9f5 SHA512 0a2bd424fee9642b0dcdb17932ba4fdac7eebc4415014fb0a00f92a4229c46250d735dd82439e70e6b4888c6f05d6a89bef54c8eefdd3419c46e053ab8458674 WHIRLPOOL 01d34c1c8831aa392b1d72c5a5b3af40b792b42dd98365d072ef24866751341ad1f7a1ce16591b7032fb8ed4decb8b67177cf997814c87771c52479c0a6525fb
+MISC ChangeLog 9711 SHA256 e985c9e0a58fdaba5bf1e7e8668136560193c38054582ea604fdc29bcae316a9 SHA512 594641e376a913d84a36cf4a644460a30f2e6af8640eb2d0ccdc92b0d402765b36b967c1e86724a4875fcb6c9fa1a95a6a48baa1622aef06f13ec5d266bd74d7 WHIRLPOOL 1df5bec8e1426545be2da2d52a14e9cf8ac3c3b739d64da54dd01346b678e4799f352abe5c5818d5ceecf088f3b8bc52f427202bd717f3cad354f8e21f351c66
 MISC metadata.xml 440 SHA256 5360673bcd3c5b31e60fc54f1865790aae76e299e82b5e6a41c5e37d026cccaf SHA512 d691277d3ddf5d944c2898440a4ff4ac6649366d81265599f9e0d23ea1db6745f7578112a73f04d1cfb705789ddec754c82b0a9590989f6ef41124e87d57d260 WHIRLPOOL e3a8031ab9b2ab901ce5e3371e6af05d85fced36582f61491a0a7f24e256888bf5a065189a6dba4d7e5f6dbf28d88b7b050a4fe29ae3d5716d15ac4cc74be86b
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diff --git a/sci-biology/bioperl/bioperl-1.6.9.ebuild b/sci-biology/bioperl/bioperl-1.6.9.ebuild
index 18b353afca0e..693bbffb0c76 100644
--- a/sci-biology/bioperl/bioperl-1.6.9.ebuild
+++ b/sci-biology/bioperl/bioperl-1.6.9.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.9.ebuild,v 1.5 2015/04/18 18:29:09 dilfridge Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.9.ebuild,v 1.6 2015/04/26 16:09:56 pacho Exp $
 
 EAPI="5"
 
@@ -15,7 +15,7 @@ MIN_PV=$PV
 DESCRIPTION="Perl tools for bioinformatics - Core modules"
 HOMEPAGE="http://www.bioperl.org/"
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64 x86"
 IUSE="-minimal graphviz sqlite ${SUBPROJECTS}"
 
 REQUIRED_USE="minimal? ( !graphviz )"