Moved to EAPI=3 for PREFIX support, imported prefix patches from overlay, keyworded as in overlay

Package-Manager: portage-2.2_rc65/cvs/Linux x86_64

4 files changed, 42 insertions, 9 deletions

diff --git a/sci-biology/cutg/Manifest b/sci-biology/cutg/Manifest
index 883603a43e89..fa77cb6010bf 100644
--- a/sci-biology/cutg/Manifest
+++ b/sci-biology/cutg/Manifest
@@ -1,6 +1,16 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 DIST CUTG.151.tar.gz 165813396 RMD160 77a304321f1535af8bb6eff1ce5c8e559a64535c SHA1 0327ccf522d9e38ab6e261bb0e2077533bf1892b SHA256 8184ac1a99ba54791d4ca672d514daeafd7e6736e76524fbbd7b3930d7d8534f
 DIST cutg-160.tar.bz2 204801251 RMD160 fd942323dc92d456498f2f12abfaef5ee511723d SHA1 132b339a47f415c21b0a46eee4b83c9fcfbdd2e7 SHA256 8d5139a5f1441535296f2d5625b90863be0c26fabe703a01c290b1d91bae936f
 EBUILD cutg-151.ebuild 1319 RMD160 1470107c17ef6f460b2e6c12c7b92dc5a5475756 SHA1 6ecacc37eba888351fb4a512b1dade90d27d6aad SHA256 f00b9020325776a8d8fc04c6cab8713e1975aeb92370216054aa1b02d9b0eb7d
-EBUILD cutg-160.ebuild 1334 RMD160 80debccf574dafe046ea02f70191f7cc37661918 SHA1 97a851095b8d6b1f88d0dc4fae7ad210dc89b9f5 SHA256 da40f4fa78b577cd846fca5b7ac1b47cf5de7bb2ae7fb08c45aa7fdb49341533
-MISC ChangeLog 6538 RMD160 79c99729ff98df863ce623d853a03057104a0834 SHA1 06f59fd7535cb81a0d96f240980052d69f22a718 SHA256 a9a3b4a38c85670486c511567bd8be6b6d37e4c0716c5ce85de272421cb31ff8
+EBUILD cutg-160.ebuild 1394 RMD160 982bb4e7b06b3dc45f779ac60fac697b14399856 SHA1 93f6ec4fb4df321399c8b646aac53dcd1350c808 SHA256 3a48a7eb1a8733849d97e361e86649ec287de54c8bb7417f23c4ee9bd16167fc
+MISC ChangeLog 6708 RMD160 078172430caa42ccfde3f327e6c0af15d1b011e8 SHA1 e61da24486155b5a37262c038fa5afb6df0b2fa9 SHA256 20d72d04e701cb46aa22ac9470ef0e231fb1be62c913726c1656a9d0a6298d73
 MISC metadata.xml 505 RMD160 8ede6f228f19c43d1a31b23742379ecfab5551dc SHA1 5145ff8f88e2abe468f4b52bb779fa216b702f4c SHA256 f3e78190afd16c11177dc9597736cf541fe5024ab1d48d7e2b46c351539e416d
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.14 (GNU/Linux)
+
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+DLYAoJSI0cMfjmIdvAUtvxrPO7ORQ7DA
+=cn1u
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/emboss/Manifest b/sci-biology/emboss/Manifest
index 25e5407a55aa..83d413073c9b 100644
--- a/sci-biology/emboss/Manifest
+++ b/sci-biology/emboss/Manifest
@@ -1,3 +1,6 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 AUX 22emboss 110 RMD160 aa416dbfca66cc7822ed162122addadde2756c66 SHA1 c77b477bfdf0e77de4f29794e4fb2e7592557e48 SHA256 cf3bd3b8d2638a0cd14e57839033d63c855114a0e12883bbc7a5106b0cfc01ad
 AUX README.Gentoo 1326 RMD160 bfaa4d7d1218d3bd4ea58d54d000da7f58b6bca6 SHA1 8cf13b8aa23c11f0af2aae06916970bf9d8a441f SHA256 33b517b977cc85824847bd6cf4113489a5554fb014f1a6b1d22d6f80c3487e9f
 AUX emboss-5.0.0-as-needed.patch 1751 RMD160 f43faab31a3d5afb4b73704ba597de578668ae48 SHA1 a108e5f68af9c14363bc56c849c9143fcb7675ba SHA256 e57a60d911e32f1aea16c079e2fd0910a5f7ed43752ea71094d3f3b7575617d3
@@ -7,6 +10,14 @@ DIST EMBOSS-6.0.1.tar.gz 20204153 RMD160 c97673670a110b51a6c1d1a0305451c44cd7b50
 DIST EMBOSS-6.1.0.tar.gz 21968220 RMD160 2eb01da419464ccbc53a95407df0243d00be8720 SHA1 2f2a48d7aa66a8852c1dd531cfe061b024521c33 SHA256 033d205c108e10e314b1ca61ec026a4a7fec2780e8781da67b0e16825b63af41
 EBUILD emboss-4.0.0.ebuild 3016 RMD160 58843ed818c0b377160a24890f6a423b037dada4 SHA1 0c0c3940a92023f3a12b04b1e18b52d4ffda3112 SHA256 87799af4224869fde9ef40fd9944fc5559af935f7a324aadd2acce98a2dd9e3d
 EBUILD emboss-6.0.1.ebuild 3479 RMD160 ad0392ebaa1a6ec78c65c8f7f037879fc459f1a8 SHA1 67402d66d7e605d8e89686642f6991d3a3c6b2a0 SHA256 0810a2d3cde0f42c0ab59fa93b70edfeaefc7ed22762eb98c827e054603e819b
+EBUILD emboss-6.1.0-r1.ebuild 3710 RMD160 40a561fbea2b7cec103a469b5c2c186a22e3f0da SHA1 e319a6227f332f24f5c2db4d1c03daa8b0bed729 SHA256 341c5988a7c1f324307e712a709ada3476f50d17f528628716570a7d2d964efe
 EBUILD emboss-6.1.0.ebuild 3674 RMD160 550aed8d7950987a0ae723e12366f95fa5ffa8f3 SHA1 a58eba04e97034b5bce0a366f9470ddd2cbcb4e7 SHA256 2241dd2ca06f8a9022e054ee426a87e1b52e36dd4b6b26b8586c02cde774e91c
-MISC ChangeLog 9346 RMD160 4292bedbe08188f762ace67c4eea936b383c1f89 SHA1 198e45fb818fd6e66912993afa5b40c754bd2a40 SHA256 31c453d3a85ad85369c25818bd9be2826a2f7262a3be7d8958ad719a9423fb89
+MISC ChangeLog 9558 RMD160 45160e1cf626d40f9ece5d7a2b6e961dbcb71cb8 SHA1 38b77fc91b4ea7b22d80944ce79b2ecac21275d8 SHA256 0115d9bb7ee9c1caceead58000a7e9957b1c52438d3cc81070ae018877ef04e2
 MISC metadata.xml 924 RMD160 0012a7f8446b6e3ade6b18e2b015bfb80c546712 SHA1 3d47f955e2c7e10fe71ba427c19cc51000990caf SHA256 9a25a29f9ad98792903c439ad7dd4ec485e44e60e23beaf1fa4c209ea89be49b
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.14 (GNU/Linux)
+
+iEYEARECAAYFAkuUE4gACgkQgAnW8HDreRamIQCeLRaARm4o1dv8IJhuDbd1Bw/S
+LL0AoLN9grh8t4oSLWdZKyf33kDzgb2N
+=yNLj
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/meme/Manifest b/sci-biology/meme/Manifest
index 0f0ca57cba16..1259ab818f6d 100644
--- a/sci-biology/meme/Manifest
+++ b/sci-biology/meme/Manifest
@@ -12,13 +12,14 @@ DIST meme_4.3.0.tar.gz 4658395 RMD160 32ddc2da3a361d737e70180198f8846a89f3aed5 S
 EBUILD meme-3.5.4-r1.ebuild 2830 RMD160 7d22f826e65582135face95b90cafefbd1cd97d0 SHA1 100a2254ec137006e75c2758ee6ba2457ded0935 SHA256 9c1604a7d2067b6bcf14ddb81f78fa609c6055ca8e6399fa866e7fae6b670cfd
 EBUILD meme-3.5.7.ebuild 2974 RMD160 40c253d011156412ca97efb4976341f3de3b0f1c SHA1 58771e53750ab5faf6893be18f39619cb98af0c8 SHA256 52de8a4de5715400ad8b0afda374fe38b962e5f11cb43b376b7a36c7ed200793
 EBUILD meme-4.2.0.ebuild 1563 RMD160 0749f2d184eb3a9a07e5749f1729a0eaacc3142d SHA1 94d3dff2e94bb75a6348baeea7e595447e8b8dd1 SHA256 2bd44351883b8f9474c3e3c421863014b57072e880b94c3d3057c8ece1b96781
+EBUILD meme-4.3.0-r1.ebuild 1631 RMD160 731ff9ca70a491c8302f3f35bced41464d5d364b SHA1 e3088c237d41a94a96af09b699b7bfda57a46052 SHA256 106c08daf8c38fc32fa6ca713f1bf24998b4c3f69bf2c6cd367c983dc3c3a9a3
 EBUILD meme-4.3.0.ebuild 1580 RMD160 77272f4187fd76e6108f13555de396e5804d0e4c SHA1 8ac19251be1661a0b93b0c67953e811093958f6c SHA256 b9efea3a598c009f1ae57f18f1bbb4a8a8f90bcdda83169740b4c8a92e1edc97
-MISC ChangeLog 2050 RMD160 bca32e09c25de71113fa142c3706579bddce6e6f SHA1 2055951ac65e039b432a06ac2f4e2801715df374 SHA256 2aadd02063d827f9d303c0529ec6afb932b2578f4274b343b8ee9f62d137d901
+MISC ChangeLog 2259 RMD160 3d69633e1c432d4afe624f41edca3aa96adcc4b8 SHA1 844185ad6c5cd65816a07423a4f0c5e612bbb6f5 SHA256 098581339a78439fee5271c33f2aef15cb60930d3cb71ded4ffd1266906e67eb
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
 -----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.11 (GNU/Linux)
+Version: GnuPG v2.0.14 (GNU/Linux)
 
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-=awIZ
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 -----END PGP SIGNATURE-----
diff --git a/sci-biology/primer3/Manifest b/sci-biology/primer3/Manifest
index cd02c1a264f8..48dfcff9d598 100644
--- a/sci-biology/primer3/Manifest
+++ b/sci-biology/primer3/Manifest
@@ -1,6 +1,17 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 DIST primer3-1.1.4.tar.gz 974628 RMD160 87535d123d4c00b64eb763e4e567c5c83fde6b54 SHA1 fcabf7d8aa31c5568bd130b318c3ead4a1b9aa3a SHA256 1cb045791afd3c4033956a65687ca0c1b1a6607ac84705bf4ed7d7151691980b
 DIST primer3_1.0.0.tar.gz 936696 RMD160 c08329cafcb8bf702a1654b4348a418b20e55c88 SHA1 0227f1f26c8b45dff9033543bee4387ade173c73 SHA256 fcbcf2e540e0062f3fa0d723b443b04a1c31e3e03e3aa5d97e3b2f910499f34b
 EBUILD primer3-1.0.0.ebuild 737 RMD160 1272a7c0f374709842089c42eb6259e1a5f5d8ae SHA1 02176df438d96fcf199a2ab10afa3e233ad224c5 SHA256 15d1a3be8db86847824d344970b9e9e41140537132198b829c5239f97176306e
+EBUILD primer3-1.1.4-r1.ebuild 953 RMD160 09421a5f0e3ad8abb7e96908bb68612afdd678a3 SHA1 50e636c82269a7f98f035ebc22a7b02ece6fbe45 SHA256 26ae7495eb971b1bac3d7692015e98414781f3eb874f774b54f9417614e98450
 EBUILD primer3-1.1.4.ebuild 784 RMD160 bac03e8b11917a1143deff34626dae8efdc0cd44 SHA1 5a1d7ff14dd1350960b570eb8d0f18946a570cf9 SHA256 dc43587ef1b94b22632f4307120b52fea1b3bad7d94bdc68ae083f1ffc8443fb
-MISC ChangeLog 3218 RMD160 f62d85a1a9cf671402eb8656a2d3a985f62a69f3 SHA1 9a29d4ad34035d66085c712b28026bfbc5fe2d97 SHA256 e2450a4c9011ad1632ff03fc80d47e140ea9fc560ac696717018269896ff9993
+MISC ChangeLog 3432 RMD160 616a3145a17d683e1b86203a3f87c3776411295c SHA1 f394e9c64ad5db273dd5424b97aeb8c9dd6c72c7 SHA256 7b6eaf33b7d95fc93f60bf8e56a8a717d5c2b5bee5b127953c8e321bac426825
 MISC metadata.xml 624 RMD160 b9c9f7ed6eb37504dbe39d7fd2c12ea7c0e2b557 SHA1 ecbd008512496eeefae63e1d36bdbe66e71e63fc SHA256 f612edc94f6538c9acf99caadc2a7d6e33cac6f933db9deafae777c7a45505bb
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