sci-biology/psipred: Add additional dep on sci-biology/update-blast

Package-Manager: portage-2.2.10/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!

8 files changed, 44 insertions, 39 deletions

diff --git a/sci-biology/psipred/ChangeLog b/sci-biology/psipred/ChangeLog
index 2b05c3ba2296..39bbff943af5 100644
--- a/sci-biology/psipred/ChangeLog
+++ b/sci-biology/psipred/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/psipred
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/ChangeLog,v 1.11 2014/04/07 14:07:07 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/ChangeLog,v 1.12 2014/05/14 12:07:39 jlec Exp $
+
+  14 May 2014; Justin Lecher <jlec@gentoo.org> psipred-3.1.ebuild,
+  psipred-3.2.ebuild, psipred-3.2.1.ebuild, psipred-3.3.ebuild,
+  psipred-3.4.ebuild, psipred-3.5.ebuild:
+  Add additional dep on sci-biology/update-blast
 
 *psipred-3.5 (07 Apr 2014)
 
diff --git a/sci-biology/psipred/Manifest b/sci-biology/psipred/Manifest
index d5ee9b33b431..15eec9ff49f1 100644
--- a/sci-biology/psipred/Manifest
+++ b/sci-biology/psipred/Manifest
@@ -15,30 +15,30 @@ DIST psipred31.tar.gz 746797 SHA256 2150696cae281bc942a18fc5f1e2057ed70cb6ee7b49
 DIST psipred32.tar.gz 747120 SHA256 0775b0f07df87b2afd4989a378fc9b47f462507a264aaf2d56dd0243d9d00343 SHA512 49660d1c3cb9aa4c3ab13e721e23b83d70d0b6ecb772b08bd1058d3293dbcc9642d63092dd9746aa2a3a9085a13ba91e9849172d36954228a4f7a16e6e81050d WHIRLPOOL 24413200771fcee89c123fad25033b3230de3fdd82016ad7d084ddb096c081c46537f35c06578dad84a79a62c493e03b8f7b51be296b04d9568ea00b94293360
 DIST psipred321.tar.gz 747151 SHA256 5e88f2402e333be401b3022937b0167a33203f6289a84dd344941546f550f1f8 SHA512 b742f5fd3151bd624452bf37761fa66d364ea5b28d9d005ae6ce6f52fc6f2b17df31d6f1e600bd6c57776a1812f22b1eafbca781b430811a010d74f157a75cd1 WHIRLPOOL bb7111851ffe533b30fd6b77fb1ae396f0dd6506ce941944974c3b5c73c41d1a5b04c5af3d7e697aeb0640c03168b78d8832747940ed0de087df784d2d27e9f1
 DIST tdbdata.tar.gz 40241247 SHA256 87b7743538898f6cdf89cc5c18e1ecd040bc6223a01821d2bfc3109f4571851f SHA512 f96d7ffbb77e129251e27f62b7f099d944bacd14935e03fc52c9f0b262cce1ad477ad43520a93b407951fb8f5dd3ba2e27ff6b5ae8a637ec03bc02f8c7c3990c WHIRLPOOL 37bc0912c6a71d1396489161465c690fb63d28167694d2e43553b6684c1f1f88866b2bf71f9531c7a7f41fc8ca81a6c93c2895ed498a07e3c4836f8c8bf4a34e
-EBUILD psipred-3.1.ebuild 1268 SHA256 939a6841f67a59a17585381a930973ac57e17c234a6d67de8a951d4e7b57712e SHA512 67b3c4e6f47a9de15820ee2e86175cd94cd32150da65edf5a70d65c9b55dca6ce0e9a7b5cfd40e0e041dd6207a86703a1358a3648d57f7316a106b65fd0957c3 WHIRLPOOL 24462cea27cb0dd6bdfdea7b9495174b3d99f9b3ac970064b180b8a1868ae9688137bf168bf903535f93c4f598dc4610b1bfe9634b0ff47752631a7969ad809a
-EBUILD psipred-3.2.1.ebuild 1188 SHA256 567ce93f012cf97380fbc27c90c12a7eaf214d22433d660dcda10a4c11ba4a54 SHA512 57be1511fb56a4d26aa075b73256fcaa457a78c86127ff602666173b3cfbc4d7ccaabfc42c7f8c822746a654357ff63e33c4be394e90c764fbca836b487a81e5 WHIRLPOOL 3fea1d283d6bc044b5937f95e5d3b69fbb1756168d1ed8aaa24e20807982ff4159cd4e2d08ef46b2db0e5c02813a4dac16792ef60c1e0342cc42e46ee1d3afc3
-EBUILD psipred-3.2.ebuild 1264 SHA256 02205a927aedd70a33350ecfb155a387651ddebd6322d3755c8fbdc00ece4d94 SHA512 a35f5b4650dd68daada6b896ea85287cd05e22a8faa8427a5ebe4491b439d5541fff20243a2acd7272c9503e39ef365e3d6b64b01ec6f6442f8cfd8d7f526263 WHIRLPOOL 29053ecffd8f6f26497bf9b9f5a7187c05603855bc0f0037729864f035f3318c25d5bd68af4b36781f57aecf3612de17ed5f8efe5eaa5e9b6abc0a0f648ef0fe
-EBUILD psipred-3.3.ebuild 1288 SHA256 d15386d5725261fdecc8ddab63da3d5db0edeea4d4109fec4e7817a81fd4f6bb SHA512 295e44aecd808d6749f6923a137aa3b4e463431e4374b50d66f6bd0f3e3f63d70cdff2eacd8b786ed989cc78016208321544bc4ab66f78f3afd3f3fc22d7960f WHIRLPOOL ad4fdc2c300437df1aab80f498c103e0c670dc9bef1915cc07bfbbf7bcf2d488ea3a82501583d74ce4f681956cfd854f8cae57ce7a4c04269740cb161fba1d2c
-EBUILD psipred-3.4.ebuild 1300 SHA256 074c4e97221af17e9cf25b73833082d7693c0fc96a8fac6a4578536ee8b6ba8a SHA512 39ee438b476b824fab7505f2cab1363bdb2aa7e1403c4a0713f27e1ae398f22ee121f95d112d0514bf164ec0ac0b360b953854890ca78de19690555f3b8d6ee4 WHIRLPOOL 93adcc77d9ff27caa57dfc110f935427f6e53af1171a4ee6d2905456c3abccc11886ce67c97f9a59718a77d42d7c4a246c6696acd3cb1c6ee08eedb89bd0dd90
-EBUILD psipred-3.5.ebuild 1300 SHA256 241d5f70c171dac75309c594ed3020c32b20804ded1ccbbfe1b88df6c83222c8 SHA512 9b34278cee2223a5d1e7c4daf10113d2ec2d2e2d0b1e25707118b70d2a42dca6a8cf79343c900364db3991b707e5fd0b850dfcbd669d894ba726fffd5a3734fa WHIRLPOOL c5eebe16c6ac394b39425204dfbebf8726e58013fad2017eb7bf5af27523c70d8523bcb3c87581bc00cc350955dd4aea66b6ac2dedb4616d46a3a57a3dd8c99f
-MISC ChangeLog 1977 SHA256 2491e842cb4f68d52e979e97ddce6a8cf9a183b6ebe9e33ab52998de3fda5080 SHA512 28c6800d5bd8b14f48ea85d5619f2c04b864c5fba7d96dbada29c4fa37ba2323033e3b7c54715c45c61f0b7ae78729f24318e505a26b24fac377a1ffe0c85211 WHIRLPOOL 9a337e9d6a2fd7a8ccbdf5c84adb198d1b82d566a55d14b979865bb7db92309ce94b6ed411c2efbfc6601201e1e179eafda4e92fc2ff4bca817df3ecb175874b
+EBUILD psipred-3.1.ebuild 1302 SHA256 9a70ae938ee6327b03d6a86ddcfbbe80ffcc1a286881ed0219c062781663c201 SHA512 5780ec9bdde40d604af9975d9529e92b82fa53746e1de5ef6b6176cfd4d37615d03915de002f6d62afbd832fb9d27cc8dae9149a9c3ebc78a6305adf4098a1e3 WHIRLPOOL 920dbaeaaacdaac95fdd2fbb5c4f86682cec777100990c48d2e6819fae8d711945e9bd6f65303111a97fe79b395d37d4d18df9ae890641b141943aed8eb1583b
+EBUILD psipred-3.2.1.ebuild 1222 SHA256 b0e90614e3e562e9fd65cf8e6fcee54513a9cd3f58e9a02d4508e74ea02be52a SHA512 608157229fb79dd3c163721a6c28a1b0e30832363149b5c759b994c3252e9a734569502ad70e6f5035d8f950cdfe290bcc06cb14ba1802325d812ed9e1bd2213 WHIRLPOOL c49ce8752663df78292ca1bff01c4cfb21e3ddc72b6a86e3310b41e1669003694f25a86bd42dab131f6ad8302e84b8c9823a25b8ecda49b264e38705f8826619
+EBUILD psipred-3.2.ebuild 1298 SHA256 8d11e680e0c9d1608d0742e387b5a06b436fd60f9c5962c5eeb66d7ac4058ffc SHA512 2f0dada40da17e430324a0bcce12043237dc4965d89452f603bed6b996b8356b510d3e812304bd3cadf757579ab476631403781296a4a94588a86778dca03689 WHIRLPOOL 3189a528e6acc6394d1322551dcc8e1116f5a2aab07950a8b9d321100e43aa3e50a004590b748a21dc2e28606631e68d60caac986397230c4bb83eab26a80e0d
+EBUILD psipred-3.3.ebuild 1317 SHA256 8bf983b96c1f60eb76ace51388dc4950968b630eec9d99ba45c0bcf98333bc2a SHA512 8dc743cf5addea60e6f47ce1a4200d72432d52b8ac77e94952cf4d519da4fdddc4b94b27e905d040ba5a805578d67f724cf2443b8f52fd406d8a1b1e5ab86c29 WHIRLPOOL 53b135f249195afebc3da1b8427cd9e06b5895b00ee2fd991a635560a9506ce1be9be433f892c82b77b005912ce3f8fb316aee4366020e81dd184d9ea53adea9
+EBUILD psipred-3.4.ebuild 1334 SHA256 69b458fa9119fd8ecae27dabadd10bdf1cae169446a4402fc0b407218245483a SHA512 a5da3bb3b25bda0dc54a5b2a20505dac5cc9ecf2b62bbad521ce97bbd9939c5f995212926029f6dd2ae2d980396dd7d1f8bccd4dfa3003cf5aaf0ff902505503 WHIRLPOOL 9e8f51c936dbc867987ec1d193e964e750037b13d459cf0c65033a3a6a61bc3a689dfe632722d598b49526752b970078a4b3956be707aaa44440f119d85f50d4
+EBUILD psipred-3.5.ebuild 1334 SHA256 74ec45d284b7930e1b897aaaf5fddf337f2ea2a3f74b5480621e1d9e4d22f5b8 SHA512 bedb464b7ebb857e57ca92e04d375881ec05ce65ff0b07eb3ab78cbc5f65b83ea9d718462dbb0315510c47cca021b5e200dafdbb4df634d49e0757b52ffb5f3c WHIRLPOOL a89d795ac4c12bf300de19b572d6d626d5432d527148f8590438736b4fff4c8850e1beb80394bb9cd3990ab7bd9138768b1b2f35c9b9f69422be2907cfdbaea0
+MISC ChangeLog 2200 SHA256 15500183e456d918d38ee10be269056d1716777f30d2af25ebe79c194cdf3158 SHA512 fedfdc8ffe40ca6c9521343704c31dbe646a75fe0cc84e2a8fbd5d8aa7c915cd075feaf4a3577054990c659a2a959eeb1393db26db558edf08707daf45c9af2b WHIRLPOOL d3b540200279ffd5ac1ef80528d6efbe2eb4e454c98966bea544d616b6684274107dd978e80f729ef4c6d852f955c7a8b7d456a1180c1a07cf76e69d50296357
 MISC metadata.xml 232 SHA256 b47c46d4e7fca734d775e015a144a25f079048297e96acb5e9ea46f41bc8cebf SHA512 49ca8eac296332df2bf730e2eabef6c0281b2d3d76792868fe091366d3eb2aef83dd8ed8df377270c2d8437ddddee0fa03fbe0d7a0692aded6cee1af416cd846 WHIRLPOOL 54aa42b7394c7da49d2fe0e0b697516b19b2749066e2a89ccea7bc0111d5deb67662954056d83c30938ec0c768c8c8135957c775ee8fe2101e9c5b1b10b73b47
 -----BEGIN PGP SIGNATURE-----
 Version: GnuPG v2.0.22 (GNU/Linux)
 
-iQJ8BAEBCgBmBQJTQrEQXxSAAAAAAC4AKGlzc3Vlci1mcHJAbm90YXRpb25zLm9w
+iQJ8BAEBCgBmBQJTc1yNXxSAAAAAAC4AKGlzc3Vlci1mcHJAbm90YXRpb25zLm9w
 ZW5wZ3AuZmlmdGhob3JzZW1hbi5uZXQyQ0JDQjFGMzBDQ0UxMjFGNENDNDgxMDdC
-OUQ0RjIzMUJEMTU1OEFCAAoJELnU8jG9FViryjsP/3UHxnDb7yzeMe2Lj6Z+KZQ5
-3GSEHzNUY2ybLiHxS/1fuDI/tKB0YTH1tj0IyHoptGwi7XUlcz2BEtP5j/F0YnEQ
-FMVb3gSEi0njdVaNQ91aQ5aujP7kN/fjoA+1iPNFfQ41mXmomCzzZWpLFfkKGUm+
-mi2iFzQG3jmqtzQy9gYiAj9R1Sf+W3XVDnMNMG9QbTnn2hizGFFqT30Lxzt3SppU
-gkPetBabgzgctQfKxaSMhndDfv/z1VqlN4yxSLT+pk3HxI0NittNR0tJ7lVUnlVi
-vB2ToN4vCQ2rtk+rt+hDrNBu1aCA5d7/NIFIaFKKS/fauoPkOTrXstSrkSjAuDyH
-JvatDVcu1qWk4GdpCCmB1Yq1rGeNPoU6NHxOkdP/z6WjDtpav21TO5kz6v9zeqCy
-5Pp6hiZVL9XRovo3wEiUjWbiWdK5RCLv680PcU22yYVIDau9i4Luogf7CEzVRVsd
-SX7KwIGp5+4KBKNUKTV1572APxv00LKsSHFLS+An4FKZMhxcsL9Wo1al3V2/4tp/
-TNg7RokOs26clkIag5FmwMRtlRSzaxHzgxP8RncrTz+8dxF3KzbqTXeARsy/f54o
-rbL5wRJg6AQXHJxPJ+IdlDQT5lZ0jECSb9iZdF352Dv6skHiGor/T1tZjbUaspHo
-Nx01tO8lcv438RwqHPtx
-=ynEq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+=Xzct
 -----END PGP SIGNATURE-----
diff --git a/sci-biology/psipred/psipred-3.1.ebuild b/sci-biology/psipred/psipred-3.1.ebuild
index 481e80e7ffa5..a58d51dad191 100644
--- a/sci-biology/psipred/psipred-3.1.ebuild
+++ b/sci-biology/psipred/psipred-3.1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.1.ebuild,v 1.3 2011/05/24 12:18:04 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.1.ebuild,v 1.4 2014/05/14 12:07:39 jlec Exp $
 
 EAPI=3
 
@@ -19,7 +19,7 @@ IUSE=""
 
 RDEPEND="
 	sci-biology/ncbi-tools
-	sci-biology/ncbi-tools++"
+	|| ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )"
 DEPEND=""
 
 S="${WORKDIR}"
diff --git a/sci-biology/psipred/psipred-3.2.1.ebuild b/sci-biology/psipred/psipred-3.2.1.ebuild
index 0b23fff0b1c7..9f744c40108f 100644
--- a/sci-biology/psipred/psipred-3.2.1.ebuild
+++ b/sci-biology/psipred/psipred-3.2.1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2012 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.2.1.ebuild,v 1.4 2012/07/11 06:21:27 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.2.1.ebuild,v 1.5 2014/05/14 12:07:39 jlec Exp $
 
 EAPI=4
 
@@ -19,7 +19,7 @@ IUSE="test"
 
 RDEPEND="
 	sci-biology/ncbi-tools
-	sci-biology/ncbi-tools++"
+	|| ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )"
 DEPEND=""
 
 S="${WORKDIR}"
diff --git a/sci-biology/psipred/psipred-3.2.ebuild b/sci-biology/psipred/psipred-3.2.ebuild
index 4d698781252e..1f62ae57f805 100644
--- a/sci-biology/psipred/psipred-3.2.ebuild
+++ b/sci-biology/psipred/psipred-3.2.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.2.ebuild,v 1.2 2011/05/24 12:18:04 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.2.ebuild,v 1.3 2014/05/14 12:07:39 jlec Exp $
 
 EAPI=3
 
@@ -19,7 +19,7 @@ IUSE=""
 
 RDEPEND="
 	sci-biology/ncbi-tools
-	sci-biology/ncbi-tools++"
+	|| ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )"
 DEPEND=""
 
 S="${WORKDIR}"
diff --git a/sci-biology/psipred/psipred-3.3.ebuild b/sci-biology/psipred/psipred-3.3.ebuild
index 4f04ddf5bcd7..a986d72680ec 100644
--- a/sci-biology/psipred/psipred-3.3.ebuild
+++ b/sci-biology/psipred/psipred-3.3.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2012 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.3.ebuild,v 1.2 2012/07/11 02:33:24 mr_bones_ Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.3.ebuild,v 1.3 2014/05/14 12:07:39 jlec Exp $
 
 EAPI=4
 
@@ -22,7 +22,7 @@ IUSE="test"
 
 RDEPEND="
 	sci-biology/ncbi-tools
-	sci-biology/ncbi-tools++"
+	|| ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )"
 DEPEND=""
 
 S="${WORKDIR}"/${PN}
diff --git a/sci-biology/psipred/psipred-3.4.ebuild b/sci-biology/psipred/psipred-3.4.ebuild
index 9a20b4ec3568..d4c5c193c7ba 100644
--- a/sci-biology/psipred/psipred-3.4.ebuild
+++ b/sci-biology/psipred/psipred-3.4.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.4.ebuild,v 1.1 2013/11/05 19:34:55 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.4.ebuild,v 1.2 2014/05/14 12:07:39 jlec Exp $
 
 EAPI=5
 
@@ -23,7 +23,7 @@ IUSE="test"
 RDEPEND="
 	app-shells/tcsh
 	sci-biology/ncbi-tools
-	sci-biology/ncbi-tools++"
+	|| ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )"
 DEPEND=""
 
 S="${WORKDIR}"/${PN}
diff --git a/sci-biology/psipred/psipred-3.5.ebuild b/sci-biology/psipred/psipred-3.5.ebuild
index bc02b7027af5..bf5b8eb69b99 100644
--- a/sci-biology/psipred/psipred-3.5.ebuild
+++ b/sci-biology/psipred/psipred-3.5.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.5.ebuild,v 1.1 2014/04/07 14:07:07 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.5.ebuild,v 1.2 2014/05/14 12:07:39 jlec Exp $
 
 EAPI=5
 
@@ -23,7 +23,7 @@ IUSE="test"
 RDEPEND="
 	app-shells/tcsh
 	sci-biology/ncbi-tools
-	sci-biology/ncbi-tools++"
+	|| ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )"
 DEPEND=""
 
 S="${WORKDIR}"/${PN}