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authorKacper Kowalik <xarthisius@gentoo.org>2010-10-02 07:52:04 +0000
committerKacper Kowalik <xarthisius@gentoo.org>2010-10-02 07:52:04 +0000
commitf77b73800751b54fe005c7d4ef5662cd0f30a579 (patch)
treeaddb0834174edd9ce35e73cf17ce8225898ce1b6 /sci-biology
parentVersion bump. (diff)
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Fix patch to compile with make-3.82 wrt bug 336542. Thanks to Diego for the report.
Package-Manager: portage-2.1.9/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/snpfile/ChangeLog7
-rw-r--r--sci-biology/snpfile/Manifest16
-rw-r--r--sci-biology/snpfile/files/snpfile-2.0.1-gentoo.diff5
3 files changed, 17 insertions, 11 deletions
diff --git a/sci-biology/snpfile/ChangeLog b/sci-biology/snpfile/ChangeLog
index 9f9995de36dc..efa38a7ded45 100644
--- a/sci-biology/snpfile/ChangeLog
+++ b/sci-biology/snpfile/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/snpfile
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/snpfile/ChangeLog,v 1.5 2010/06/20 16:58:42 xarthisius Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/snpfile/ChangeLog,v 1.6 2010/10/02 07:52:04 xarthisius Exp $
+
+ 02 Oct 2010; Kacper Kowalik <xarthisius@gentoo.org>
+ files/snpfile-2.0.1-gentoo.diff:
+ Fix patch to compile with make-3.82 wrt bug 336542. Thanks to Diego for
+ the report.
*snpfile-2.0.1-r1 (20 Jun 2010)
diff --git a/sci-biology/snpfile/Manifest b/sci-biology/snpfile/Manifest
index dd9087c775b9..d53d78e289b8 100644
--- a/sci-biology/snpfile/Manifest
+++ b/sci-biology/snpfile/Manifest
@@ -2,18 +2,18 @@
Hash: SHA1
AUX snpfile-2.0.1-gcc44.patch 387 RMD160 0a31eb4741dd824ab35c7559e89787ee589e3788 SHA1 a2abee114666c397f8f2d6c987ad3648d4aa37cf SHA256 349c6594759f16da2602415ff217c37bb677e2508437497b508c91ab4668956a
-AUX snpfile-2.0.1-gentoo.diff 20200 RMD160 f756f9f181769f6c909375b8e5c1aeec116879f1 SHA1 63aaf9bc84aa8c74ee862d4ed4ea311097b45122 SHA256 d8020eeec0ad593983ee07a13814a509fc6a36839ff28be28387405b985a3a3b
+AUX snpfile-2.0.1-gentoo.diff 20216 RMD160 7d1cae6f1ab05670633988b9a9df3a481d353adc SHA1 44a2884f28510d4018bdcb411bf5c8a04677dd51 SHA256 f12e5a9fc0aadf963f5abd198327bf5c8eec2cdeb76786467b11d6d116f1d704
DIST snpfile-2.0.1.tar.gz 171854 RMD160 0d3f44bab5a59636aa4b1901c0ce5816b62a346a SHA1 d5f7c58540782d76a7aed9c13fc5bedab2d69a0b SHA256 71569e0dcd426447d1a5d215fb47615074a4c8d935cf70ef63c5f47a411b0b76
EBUILD snpfile-2.0.1-r1.ebuild 823 RMD160 6f0a65c2a714e52e58706563f508b3e8b4c8bc9e SHA1 a98c0512466ebdeb8f4626fabf2e6a86a46e8fc0 SHA256 58fb5f9136d68e2614df6953da6297d7e78741c6d612718ca30ab5eb2a462598
EBUILD snpfile-2.0.1.ebuild 676 RMD160 e0519c79b1ed69b0541903c1ae72007a88746290 SHA1 c779886c1e6238ce7b86348f92b2a0e0cf8d4e76 SHA256 7f696bc551aa546e7225045b895452242779919cabed3b80d21aa8103ea232d9
-MISC ChangeLog 979 RMD160 5f428fd0dd196beda292cddf0fa5a553ac63c6bb SHA1 b4f6d7b163fb016832c7eb4263d4684931640066 SHA256 559fa918a1ded927e15ef38873b96f9761547ad0f08465a28c7c9dbcb3a9312a
+MISC ChangeLog 1157 RMD160 2616a43e57cd37d53c46388db499fc4e08faff3c SHA1 5f009e56edcfde179c7a45c7796a6de55c60c537 SHA256 50ee9182ff7397ef8c270ef1845f80bcc1b75e5156125346e251bba8e8d5e3fc
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
-----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.15 (GNU/Linux)
+Version: GnuPG v2.0.16 (GNU/Linux)
-iJwEAQECAAYFAkweSMsACgkQIiMqcbOVdxR88wP8CjgiAoVZoOHHXB2aD9yRUzWD
-2ykBFXV57hb8xZt2/3Dr/Q6Ceg3uNm11dGyoV1g5iXsC0L0aRio1HLNebApJvRlE
-t8Qm417LOgRKqF6mDahU9Xkwah/wLiAg2xjv6i6GK9kysLagd+lB75FFWsNiowfn
-6bA6SnhhsXDb8VFhc1g=
-=4QrV
+iJwEAQECAAYFAkym5K0ACgkQIiMqcbOVdxTXqAP9GgNXWhX6r0YAunEE/9/Gu0au
+Ef0Xb5uXmg6rRFWTu5GFQzin0BmcH/SOqiDoPKzbjw9HlO4oxTpYzTL08e1j1TKA
+fxaPm3tZ+1LOON5nWflDXJrqAsEDrGg7UzS1LZivnR6nk0cP0GgBMIfWLOI0tODN
+3B0lcI5RA8z29Rwj8AY=
+=SJmR
-----END PGP SIGNATURE-----
diff --git a/sci-biology/snpfile/files/snpfile-2.0.1-gentoo.diff b/sci-biology/snpfile/files/snpfile-2.0.1-gentoo.diff
index 3ce94f1b502e..e6a8d60ec69c 100644
--- a/sci-biology/snpfile/files/snpfile-2.0.1-gentoo.diff
+++ b/sci-biology/snpfile/files/snpfile-2.0.1-gentoo.diff
@@ -4,14 +4,15 @@ https://bugs.gentoo.org/show_bug.cgi?id=294971
--- Makefile.am
+++ Makefile.am
-@@ -1,440 +1,91 @@
+@@ -1,440 +1,92 @@
ACLOCAL_AMFLAGS = -I m4
-AM_CXXFLAGS =
-AM_CXXFLAGS += -Wall
-AM_CXXFLAGS += $(BOOST_CPPFLAGS)
+AM_CXXFLAGS = -Wall $(BOOST_CPPFLAGS)
-
++SUFFIXES = .cc
+
-
-# for testing
-AM_CXXFLAGS += -g -O2 #-lefence