diff options
| author |   Andrey Kislyuk <weaver@gentoo.org> | 2010-02-26 16:07:02 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2010-02-26 16:07:02 +0000 |
| commit | f8bf7a88512021a38bcdd9cb826173db9676f724 (patch) | |
| tree | 18fd3aefe8d9f10680ced1c6b498c10fbe7e219a /sci-biology | |
| parent | Update mirror://gnu list. (diff) | |
| download | historical-f8bf7a88512021a38bcdd9cb826173db9676f724.tar.gz historical-f8bf7a88512021a38bcdd9cb826173db9676f724.tar.bz2 historical-f8bf7a88512021a38bcdd9cb826173db9676f724.zip | |
Set custom lib dir, bug 306595
Package-Manager: portage-2.2_rc30/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/ncbi-tools++/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/ncbi-tools++/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild (renamed from sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r1.ebuild) | 16 |
3 files changed, 20 insertions, 8 deletions
diff --git a/sci-biology/ncbi-tools++/ChangeLog b/sci-biology/ncbi-tools++/ChangeLog index 17ee97585d64..493d4040a980 100644 --- a/sci-biology/ncbi-tools++/ChangeLog +++ b/sci-biology/ncbi-tools++/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/ncbi-tools++ # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.9 2010/01/12 14:46:33 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.10 2010/02/26 16:07:02 weaver Exp $ + +*ncbi-tools++-2009.05.15-r2 (26 Feb 2010) + + 26 Feb 2010; Andrey Kislyuk <weaver@gentoo.org> + -ncbi-tools++-2009.05.15-r1.ebuild, +ncbi-tools++-2009.05.15-r2.ebuild: + Set custom lib dir, bug 306595 12 Jan 2010; Andrey Kislyuk <weaver@gentoo.org> ncbi-tools++-2009.05.15-r1.ebuild: diff --git a/sci-biology/ncbi-tools++/Manifest b/sci-biology/ncbi-tools++/Manifest index 972db5dae8fa..682663b0ca54 100644 --- a/sci-biology/ncbi-tools++/Manifest +++ b/sci-biology/ncbi-tools++/Manifest @@ -1,5 +1,5 @@ AUX ncbi-tools++-2009.05.15-gcc44.patch 554 RMD160 57a23cbaad59b6011124f684db55f4ac2e4a43ab SHA1 7ed63addba554bf87a347d25ea2d4ea6b6552a1a SHA256 ddc2379ff636851e1bb4fb601930ee926c396819e06812b1ba76da001255d5c6 DIST ncbi_cxx--May_15_2009.tar.gz 13986626 RMD160 131a04d43056fd4d4fd1781d38a5c1b9e3089a13 SHA1 0cecad93774ce40b3455149b2c3538dfce032b85 SHA256 ccb86f2e33251580e23c94b8d2a4aa4832c278171ded29513f0c9859b303f1d8 -EBUILD ncbi-tools++-2009.05.15-r1.ebuild 2459 RMD160 a9db3f0d68b753519489f6c2f8fb3a2de3600031 SHA1 18ff717adacf361e8fb9c728887ff1c2d924dce0 SHA256 c76a46e277014f58d909ca0871397e3929638ec6e2ed9554994bf5fb8f33aaa2 -MISC ChangeLog 1768 RMD160 55f2c605943cc04e10249f75cd1bb7cf3b5a305f SHA1 7202963cdb8a6a28a976a6fec6762efc1261ef9b SHA256 82a52c532e82d34800fdafae3f4e78986eff7575ba9dcebe27f11351f42c4ebb +EBUILD ncbi-tools++-2009.05.15-r2.ebuild 2538 RMD160 20c19e891bd8cb95f31397b824c634dba69b3000 SHA1 49e4bf2474be89bb69a6b8d853fabeffe6955235 SHA256 68af78953d8db1bb3f1e0959d0465b1b6ec3632adea7bc736673a2d5eedfeeb2 +MISC ChangeLog 1970 RMD160 740c9a6ac86b7e72b88fe4dbe74bccd4ff617661 SHA1 f13bb19d94ba70cdf98f6fb365877786e5ab82a1 SHA256 eb64875fe205ff0471cf77b91fad32bcf9295e5088dac89742dec664dcf86d04 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r1.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild index 7cd06bde8a65..b8ae87fe88f4 100644 --- a/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r1.ebuild +++ b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2010 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r1.ebuild,v 1.5 2010/01/12 14:46:33 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild,v 1.1 2010/02/26 16:07:02 weaver Exp $ EAPI="2" @@ -61,13 +61,15 @@ src_configure() { --with-dll \ --without-ftds \ --prefix="${D}"/usr \ - --libdir="${D}"/usr/$(get_libdir) \ + --libdir="${D}"/usr/$(get_libdir)/${PN} \ --with-z="/usr" \ --with-bz2="/usr" \ --with-pcre="/usr" \ --with-openssl="/usr" \ || die +# --with-mt \ # fails with gcc-4.4 but not 4.3 + # apparently gbench-only configs # --with-boost="/usr" \ # --with-sablot="/usr" \ @@ -88,7 +90,11 @@ src_install() { emake install || die # File collisions with sci-biology/ncbi-tools rm -f "${D}"/usr/bin/{asn2asn,rpsblast,test_regexp} - rm -f "${D}"/usr/$(get_libdir)/libblast.* - # File collision with openrc. NCBI probably needs a subdirectory in /usr/lib - rm -f "${D}"/usr/$(get_libdir)/libeinfo.* + + echo "LD_LIBRARY_PATH=/usr/lib/${PN}" > ${S}/99${PN} + doenvd "${S}/99${PN}" +} + +pkg_postinst() { + einfo 'Please run "source /etc/profile" before using this package in the current shell.' } |