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authorJustin Lecher <jlec@gentoo.org>2011-06-26 08:46:21 +0000
committerJustin Lecher <jlec@gentoo.org>2011-06-26 08:46:21 +0000
commit0a5c3a1e9555a146a859d14656174c2fb3e6b052 (patch)
treeb4fd2e692999845bf4af73cd8bd4df08c6e29e4c /sci-chemistry
parentStraight out QA issues (diff)
downloadhistorical-0a5c3a1e9555a146a859d14656174c2fb3e6b052.tar.gz
historical-0a5c3a1e9555a146a859d14656174c2fb3e6b052.tar.bz2
historical-0a5c3a1e9555a146a859d14656174c2fb3e6b052.zip
migrate from 'git' to 'git-2'
Package-Manager: portage-2.2.0_alpha41/cvs/Linux x86_64
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/p3d/ChangeLog6
-rw-r--r--sci-chemistry/p3d/Manifest16
-rw-r--r--sci-chemistry/p3d/metadata.xml10
-rw-r--r--sci-chemistry/p3d/p3d-0.4.3.ebuild8
-rw-r--r--sci-chemistry/p3d/p3d-9999.ebuild13
-rw-r--r--sci-chemistry/probe/Manifest20
6 files changed, 37 insertions, 36 deletions
diff --git a/sci-chemistry/p3d/ChangeLog b/sci-chemistry/p3d/ChangeLog
index 484c1275359a..8e6cccc14e56 100644
--- a/sci-chemistry/p3d/ChangeLog
+++ b/sci-chemistry/p3d/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/p3d
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/p3d/ChangeLog,v 1.3 2011/03/11 12:18:11 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/p3d/ChangeLog,v 1.4 2011/06/26 08:46:21 jlec Exp $
+
+ 26 Jun 2011; Justin Lecher <jlec@gentoo.org> p3d-0.4.3.ebuild,
+ p3d-9999.ebuild, metadata.xml:
+ migrate from 'git' to 'git-2'
*p3d-0.4.3 (11 Mar 2011)
diff --git a/sci-chemistry/p3d/Manifest b/sci-chemistry/p3d/Manifest
index c56111462c07..eae7e2c6367a 100644
--- a/sci-chemistry/p3d/Manifest
+++ b/sci-chemistry/p3d/Manifest
@@ -1,15 +1,15 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
+Hash: SHA256
DIST p3d-0.4.3.tar.gz 7213577 RMD160 2a251097bf7f83b27e519b20e4110fe330b2b6a3 SHA1 ced099dcaa28517c6095c1153f3a19bb6c78494c SHA256 b968eb37c0d27ad1f4f46f8a942fb2b62fbcdb50b31a1e66875e2cdc036a9932
-EBUILD p3d-0.4.3.ebuild 806 RMD160 8372fe306cd01d2938956e29d4345b46c572347a SHA1 3c3c1d8a44d6ce88354973f87676758b0a562fc0 SHA256 6586f6d06e094a6ed69c64eb74c4d2c14e71435b1d5dc3c82276381769af6454
-EBUILD p3d-9999.ebuild 720 RMD160 0f1147919f3c71f6ce5eb545456cc3c96e9efef8 SHA1 4800dcfa8dfe5135094f4983dd246f3e253fd545 SHA256 8e3a5b6bb2984ce0b251a403d748a686a15df63d276c76fb57f34e2c7df7529a
-MISC ChangeLog 672 RMD160 71a5bf9e547b64a4c10d3ed606086767829554eb SHA1 915da536b4e306e16cb82e2787c760b9c0256db2 SHA256 40649c4d8b5a5ee62701727f2ffb1ec2ac10a00cf17af8284e76cade23310a5e
-MISC metadata.xml 1111 RMD160 b9cef3a070a2a4df9d8827e7dabcec89b0812ca6 SHA1 2a02f4b691e39756104450e05c31d00dba3dce94 SHA256 4c1ec1718b9a843cd12a09a3379958ed0eee0c305ae68f956e38e9eba3f0d0ad
+EBUILD p3d-0.4.3.ebuild 812 RMD160 2f5cff91dce9206a300f3d6ee076eff249b4ec7d SHA1 e2005304a34297f9b7ff7e4a5a7afa37dee79371 SHA256 8a1503c841083b99e14b057723f10b14ef0d4055bd5a699b0e96aed65c2d8728
+EBUILD p3d-9999.ebuild 660 RMD160 c896a83981937daee2fab1022b7f3e065ae992a4 SHA1 e50f104efbfd77d0281c22a3188a7de28ddd5570 SHA256 4701b89f43d92aba231850a716544b581d468105cf90f1ecccce9e4461a525f4
+MISC ChangeLog 803 RMD160 7672634d06ea03cb50d3d02f2bd4383e55ff3a46 SHA1 de72ac1ec0911a26708bdeccc4cbe812e6403f09 SHA256 d3d08ac9c5527228882711794857e7765fa4d843f9e9eb02092992bc54c4ad6f
+MISC metadata.xml 1115 RMD160 7893ac5429d7b296035be2ac007811ee89962ea4 SHA1 e15fae425e3856016e03bcd4182c1bca32386b76 SHA256 22b2f06bdd19ff3eefd8f1aeb3ce8adee89bde8ad8d5069729597ac366096dd4
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2.0.17 (GNU/Linux)
-iEYEARECAAYFAk16EwkACgkQgAnW8HDreRaZqACgnHuosGOPP+R9i3d+QW+eHVa0
-u64AoI3zEwdAubZnm9XMJZQRlyUKG0U0
-=83Ah
+iEYEAREIAAYFAk4G8eMACgkQgAnW8HDreRa61wCdGsetraIKUoI18gUCy5nC9TA8
+3bcAoNAKx0LLtBazV6Kw6gyZZDS8FC/Q
+=CYiK
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diff --git a/sci-chemistry/p3d/metadata.xml b/sci-chemistry/p3d/metadata.xml
index 9a0f5eff3224..bd602bd0e68a 100644
--- a/sci-chemistry/p3d/metadata.xml
+++ b/sci-chemistry/p3d/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<herd>sci-chemistry</herd>
-<maintainer>
- <email>jlec@gentoo.org</email>
-</maintainer>
-<longdescription>
+ <herd>sci-chemistry</herd>
+ <maintainer>
+ <email>jlec@gentoo.org</email>
+ </maintainer>
+ <longdescription>
p3d was developed in order to offer a Python module that is powerful and fast,
yet intuitive to use. The simplicity of p3d is due to the usage of object
oriented programming (i.e. atoms are treated as vectors), the implementation
diff --git a/sci-chemistry/p3d/p3d-0.4.3.ebuild b/sci-chemistry/p3d/p3d-0.4.3.ebuild
index 7b27d43ea9a5..967a1354871a 100644
--- a/sci-chemistry/p3d/p3d-0.4.3.ebuild
+++ b/sci-chemistry/p3d/p3d-0.4.3.ebuild
@@ -1,8 +1,8 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/p3d/p3d-0.4.3.ebuild,v 1.1 2011/03/11 12:18:11 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/p3d/p3d-0.4.3.ebuild,v 1.2 2011/06/26 08:46:21 jlec Exp $
-EAPI="3"
+EAPI=3
PYTHON_DEPEND="2"
SUPPORT_PYTHON_ABIS="1"
@@ -13,7 +13,7 @@ MY_P="${PN}-$(replace_version_separator 3 -)"
GITHUB_ID="gb8b9a75"
DESCRIPTION="Python module for structural bioinformatics"
-HOMEPAGE="http://p3d.fufezan.net"
+HOMEPAGE="http://p3d.fufezan.net/"
SRC_URI="https://nodeload.github.com/fu/${PN}/tarball/${PV} -> ${P}.tar.gz"
SLOT="0"
@@ -30,6 +30,6 @@ src_install() {
distutils_src_install
if use examples; then
insinto /usr/share/${PN}
- doins -r pdbs exampleScripts
+ doins -r pdbs exampleScripts || die
fi
}
diff --git a/sci-chemistry/p3d/p3d-9999.ebuild b/sci-chemistry/p3d/p3d-9999.ebuild
index 6675a9d46995..9764df7ce4d0 100644
--- a/sci-chemistry/p3d/p3d-9999.ebuild
+++ b/sci-chemistry/p3d/p3d-9999.ebuild
@@ -1,19 +1,16 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/p3d/p3d-9999.ebuild,v 1.1 2011/03/09 10:34:14 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/p3d/p3d-9999.ebuild,v 1.2 2011/06/26 08:46:21 jlec Exp $
-EAPI="3"
+EAPI=3
PYTHON_DEPEND="2"
SUPPORT_PYTHON_ABIS="1"
-inherit git distutils versionator
-
-MY_P="${PN}-$(replace_version_separator 3 -)"
-GITHUB_ID="gb8b9a75"
+inherit git-2 distutils versionator
DESCRIPTION="Python module for structural bioinformatics"
-HOMEPAGE="http://p3d.fufezan.net"
+HOMEPAGE="http://p3d.fufezan.net/"
SRC_URI=""
EGIT_REPO_URI="git://github.com/fu/p3d.git"
@@ -28,6 +25,6 @@ src_install() {
distutils_src_install
if use examples; then
insinto /usr/share/${PN}
- doins -r pdbs exampleScripts
+ doins -r pdbs exampleScripts || die
fi
}
diff --git a/sci-chemistry/probe/Manifest b/sci-chemistry/probe/Manifest
index 350a6c653fb4..2ac0f8000d9c 100644
--- a/sci-chemistry/probe/Manifest
+++ b/sci-chemistry/probe/Manifest
@@ -1,21 +1,21 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
+Hash: SHA256
AUX 2.12.110413-as-needed.patch 1339 RMD160 6b169c85d81c15203470c0f51ff89b24cd0254f9 SHA1 c7d3cf79a3b254ac265a3463d55ec578d54965b0 SHA256 938b52b3323c9db494a7e0192381c3469c16f3c53c77b881106c81b9760cc860
AUX as-needed.patch 594 RMD160 9dbc42aaff30aa2eabfd2e038ae967af91a2f542 SHA1 6ea451e5cf7bf38018c9d72ff74ea16d7d1b8b20 SHA256 1f46ff455ac4167fe56051fa2fb8859ee5c504429b70abb787ccf8a480fb7065
DIST probe.2.11.050121.src.tgz 99403 RMD160 85d65f7c7379e8d4c46fe5c3b19a2d67fc12a32e SHA1 7fd88ec312558b6f2eb0b6da412140cb83e1a9f4 SHA256 c37255142e37df3d59da6be935bd79c799b5e703fc453b3978298617b0c0b278
DIST probe.2.12.071128.src.zip 130039 RMD160 8ca1aa70fb614c412ea9fbfae5a1c2b4baa19178 SHA1 9607f984b11f4e6b8ff00768cfde458aba007607 SHA256 470c4280eab18ce96bc323c5a1151933e9c6b412e5f587c4b77ac4ab152bddbb
DIST probe.2.12.110413.src.zip 262460 RMD160 6b98259f7ad4e420b84563df6741f99e90fd99a7 SHA1 b453802a13b0c4f05011a045ff18d63744e25f6a SHA256 90cd0a693683958a8ac05d13a47c2b464f2939df24369bf5c568f59913756de4
-EBUILD probe-2.11.050121.ebuild 870 RMD160 ba3219a6aefc687db24f16c8dcd87a35c8bae51a SHA1 1dcf51c09d85f83b8377bca0b5c60d49e034dd16 SHA256 8d402fc20ac542b08523d0a0fddfff6e3f2e2a215af7885b6a57138cc685894a
-EBUILD probe-2.12.071128-r1.ebuild 998 RMD160 6fba82988a347879c9d42cddb0e31cabc7cccb45 SHA1 2a4c1088cf0aae97e9b526e93a795b71bd865a17 SHA256 23393921e37445e421d843a0f96de70d11d0d8f6f170320c985f29bcaaec047a
-EBUILD probe-2.12.071128.ebuild 952 RMD160 c737e1b74cb047adcce846b5c32a8c993dd856d1 SHA1 0d2b5521dee8735f5136af3a70b9457e70ce8572 SHA256 edb3f3293143f0a218d55ec7d57a5df0e5e464e3547f49cac09283826c1571fc
-EBUILD probe-2.12.110413.ebuild 868 RMD160 89385364791f640aa87283a9886cb5d856c8660f SHA1 f0c5cb0f5419113d6c675013b9e2d0ccb6243a67 SHA256 04f38ec7e1a39e72a955c4de1bbf70ea1e79b58ded6eb2fa7db9adebbd5805f9
-MISC ChangeLog 1780 RMD160 674f2ac0881294ae88f5addcbdca166c4b591a49 SHA1 d728f2652a24a04169dc766fb547ec2a74d96ed5 SHA256 6ee19f3fd0dc436c035f59b8f3a34e68c64b89f99d5d1570c5a719dc0760ae40
-MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852
+EBUILD probe-2.11.050121.ebuild 871 RMD160 b3c48aca530424409091693020905078a8d1ac4e SHA1 1a216891d3a33f5e44943fa4c9c8b757dabc3de2 SHA256 3bea38c30f4f8f45006d4d91ce33bc7e6bb22590a1095561d0855545ff613618
+EBUILD probe-2.12.071128-r1.ebuild 997 RMD160 9268870c1951cf559cfaa5aaa1acaaa4ca2f3805 SHA1 1420e3c76f0f55cf67cfbd3430e345f810653fdf SHA256 fc06ef90209e3ef6bff23efe0b5976ded3954a6ec749d88b43255c791113931f
+EBUILD probe-2.12.071128.ebuild 953 RMD160 fd00a1ba93e183143eabffff7e3d058705c487a4 SHA1 71100becbbb9066de0a076526e2b84ee114b6ce9 SHA256 ae5280be41bb5979e20927518dee81470b87d58ba7b9088cc845259d6625436d
+EBUILD probe-2.12.110413.ebuild 869 RMD160 71beb5f2613935c1e0c6093e13c2cf6e6cb51c2b SHA1 231825016fa260e2e37250aa38c819f3be141663 SHA256 0547ba29818e05c3cb5502b695e2a1958d120d062304d19b5323dbfbd5bb72a2
+MISC ChangeLog 1978 RMD160 94a8316822bb396decb2da3ce703a28bf723c3ec SHA1 79e0e665e878d94b11b3a70a1fc4074a29ac52ab SHA256 e0f270e06bd692db6b121cf4da767a780829cacfe7cf5188cf6843bf246eff67
+MISC metadata.xml 167 RMD160 ea4003a55d6e2079381a540c441fc59cde29025a SHA1 3bc6dc4dd68f7de22828138e62aa117387b1765d SHA256 f313eeec4ebffac500b57a98a225e32c77489fc826a50494749b6cdeec28e3e8
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