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authorSebastien Fabbro <bicatali@gentoo.org>2014-02-03 17:58:02 +0000
committerSebastien Fabbro <bicatali@gentoo.org>2014-02-03 17:58:02 +0000
commit0eef4ce6b8e5de248430c6cf3c0986bd86dd851d (patch)
tree946eb09ee87dfab5bbb1621e9277d812e204de25 /sci-libs
parentVersion bump and fixed bug #499694 (diff)
downloadhistorical-0eef4ce6b8e5de248430c6cf3c0986bd86dd851d.tar.gz
historical-0eef4ce6b8e5de248430c6cf3c0986bd86dd851d.tar.bz2
historical-0eef4ce6b8e5de248430c6cf3c0986bd86dd851d.zip
Removed old
Package-Manager: portage-2.2.8-prefix/cvs/Linux x86_64 Manifest-Sign-Key: 0x13CB1360
Diffstat (limited to 'sci-libs')
-rw-r--r--sci-libs/cholmod/ChangeLog8
-rw-r--r--sci-libs/cholmod/Manifest18
-rw-r--r--sci-libs/cholmod/cholmod-1.7.4.ebuild105
-rw-r--r--sci-libs/cholmod/cholmod-2.0.1.ebuild62
-rw-r--r--sci-libs/cholmod/files/cholmod-1.7.4-debug.patch17
5 files changed, 17 insertions, 193 deletions
diff --git a/sci-libs/cholmod/ChangeLog b/sci-libs/cholmod/ChangeLog
index 7ecbd51f032d..c5f3fd2b58a5 100644
--- a/sci-libs/cholmod/ChangeLog
+++ b/sci-libs/cholmod/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-libs/cholmod
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/cholmod/ChangeLog,v 1.40 2013/07/18 13:39:01 chithanh Exp $
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/cholmod/ChangeLog,v 1.41 2014/02/03 17:57:56 bicatali Exp $
+
+ 03 Feb 2014; Sébastien Fabbro <bicatali@gentoo.org> -cholmod-1.7.4.ebuild,
+ -cholmod-2.0.1.ebuild, -files/cholmod-1.7.4-debug.patch:
+ Removed old
18 Jul 2013; Chí-Thanh Christopher Nguyễn <chithanh@gentoo.org>
cholmod-2.1.2.ebuild:
diff --git a/sci-libs/cholmod/Manifest b/sci-libs/cholmod/Manifest
index 2b9947de87e9..9026b1d5e377 100644
--- a/sci-libs/cholmod/Manifest
+++ b/sci-libs/cholmod/Manifest
@@ -1,14 +1,18 @@
-AUX cholmod-1.7.4-debug.patch 435 SHA256 826b6e7f5fe50501ce7542bf264e043a454b1be268351a9de33546ef6e7344fc SHA512 7482b966d89012e565b05bc00f800149a81929a9bbca29890c8dc984ccfd9a34e78832a4dd3831995ee9d2439d64e3ddd68d8f8cef8f13263cf516980db0a4fc WHIRLPOOL f8e81a9011ec83baefe4e5ab83c973a4fa9b44dfb068adde2735ae8e187f74b52aaa61daca2ad697bf4ab30be34bcf82b4f46a14e88995fcffcc46fe67208b62
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA256
+
AUX cholmod-1.7.4-parmetis32.patch 702 SHA256 fb8f2950c908d21ee649c16f8e26bbe5e37284c1417cf9b7f22e6f82532944f8 SHA512 a1694a7f42f10c7619e23817e93f76df35bc208200918b74a6dd68bb4662d57ce2f3665be424ad4b5c8a4ea9c3957676c48716aa0e47d9fb19337dc43e759ecc WHIRLPOOL ce45b6ad88acebba64df6209d12cfca54a22d7cee9b529b8f20d9f8d855dcdcda6d9485e110bac15b99a86af8b996fccedc0fd43f87bdff83a824d1c2cba1aa6
DIST CHOLMOD-1.6.0.tar.gz 1092883 SHA256 6e13d49c5452cd99e5eb828d50a55dc56d399751fe5dee82b0a5a3dbefd24e0e
-DIST CHOLMOD-1.7.4.tar.gz 1169002 SHA256 0cefc540d4e341afd614dfc107fe9f38afb504df6566e8d2cd209ae3321afbaf
DIST cholmod-1.6.0-autotools.patch.bz2 5388 SHA256 141762b6657924f52a557d8d79ea672dcc16a3f08022ac6b4f2ff3f5c895798e
-DIST cholmod-1.7.0-autotools.patch.bz2 5534 SHA256 901b83939ce09a51baa9431639d4fbebde1bfd70998b4b66d2753a91daed931c
-DIST cholmod-2.0.1.tar.gz 839977 SHA256 e2840fbc9d60182b19a865a39baaaf85e311cc678367f05b7edcf18dde9083ef SHA512 67b095b1ec2baba6ef542fd15c15d469844526c2ef832667bc0753cf278ffe65a951104df6127496c6cf1438d7edffb9d141cfe73e4c8588ab351a0bc16e1a62 WHIRLPOOL ebd74ab547ebf2cf16cd3ede1f103fb92a708b771451b34020ceba05537e9ec0a359a9ef007090e77c6948ce0323e2a46c9b1ea101965b021b54e5c821ebd640
DIST cholmod-2.1.2.tar.bz2 656458 SHA256 eea80ad7b797866df1505feafa8c33279f6bc7e7e5aec4f00a167a0a0e73675f SHA512 7aca97de4c60ff2d7a76a776be4c2d61243a159a51b9e147fa2480f2aaf61a5d966eb0f1cb57c0145510437f6c478fa30384b741709d0a02432b74ada3e78089 WHIRLPOOL 8f8f2c4f504f30905c442422042d0b3a203cb24ab289b51bdb4ee6606ca006eef3afb2611bcc6074c1532893caa5ec5a63e4c4d46d115e2528700d98b65dcb27
EBUILD cholmod-1.6.0-r1.ebuild 2696 SHA256 d6a30f38f5da559076315c7706ed968e2e342c53fe1383ca012d57de22e63a43 SHA512 3b2d6fe65f454235496f9e4859595fbb91044610a3bb9ee364dc0bf3ee2e7cebb8fcbf0a360e7bd7cf9f4b4345c769842251a1bfb110d7ecb2151f29c59b0e2f WHIRLPOOL 97fccf9405b8ed93112674644f218f42a1dc2f3cba79ad99ea5ec61ce772a721705331017f2e0b49ac8890cc5a66a42bf8e2ae5d1a06caffb13c9a9abb935911
-EBUILD cholmod-1.7.4.ebuild 2954 SHA256 82de6c38f37324f2caaaa50d428b0db22249831d816d53449af85cd82d3acbc2 SHA512 6dc6bfa20bb8aa48484e4d7c9197e937429cf8d832a9a70f36c7ca9d67d1bc59ed9b45dcbc073e552953588c7c303e0934f6602b3e5769007153b33a41449be2 WHIRLPOOL fe935e296a48d5010cc3a772193dbf5e382c8fab8ddb8061528244423f2ed82fb2db7ce5acd193ca932e40bfbe2d8ecee2b3eb7d0f8931750e0d1042ecb4cc77
-EBUILD cholmod-2.0.1.ebuild 1808 SHA256 8cc64024f113ed1dee2f43b223e2b031dd649470f5ba9a291c2b8f706887e4d1 SHA512 ee6dc0d1422e1b93b3a44ef9c1e7a576e69e3ddccfec624193a5c4957e43b250d2943d3fb04eebd7394f6fbd8245a7d58f29817bf71742ce22fba5df51e83350 WHIRLPOOL f86ff3b0dbaaeb956d2d785b3c7b566fbec0b53e3ca30d3cff50e7c1049fe93bac17bd40d3ea2e42a00b098e8214be7c443940027aaaeb325097483876bf88d5
EBUILD cholmod-2.1.2.ebuild 1876 SHA256 6ea490f744fdccc86ebbbb8e24ec5722a5344f663d9bf774408ab912cea2fc56 SHA512 bbbde61dec8bfe46e977ebd787945cf140cff4075039a7656caf0771507eacd8bba07d963a685ea1f7ee380bee49cc58311226c699e1846119723b9611fe77ce WHIRLPOOL c150aa09aa7738dcc89ffd0626dad7099f07c481cfeccd92f03ee54d0a514b57ffa3ec908480fe662d873548ee0390767fdab794387d89d4c661573151fc8109
-MISC ChangeLog 5539 SHA256 857f5e467ef237a53e1dbf0f7bc44995e55a69984d412152e987150fae767ca0 SHA512 091185a406ed533ad5015830e86e5b243e5479e564bb8677d4f16ff68424e4e3e5734e170288a6ad6667e677fb0e4b2abecf247eafc39da5e84c6be3fc4b09d0 WHIRLPOOL b11db24a6c906a5f0445928d89f85db5185025ba575c4a2f521f1f1c12efcc0110834ee928e3e86b5315ab4746bd679a3a51ad5644bcbd6a0a3050277aadbedb
+MISC ChangeLog 5691 SHA256 1f64e2860fb9cf1cbf50df1815ccce72b7872996d6005930d7f91f09ac81731d SHA512 54c0b6a28c74a5ed809e436b44cd8649404a66f36371ccccd116f3a3285a8a62653c60ad0933e6b555db77f79ccdf87ec11f923da7d8f7de6c2032232da7910c WHIRLPOOL 1ea846940808ce38d20d47bf2d952dcc8b57cd8cf86ab5cc14303650d788646b63dfb82fe7671ef5461d10b374120ae5cf3b7ba8d2e69611c95c54bcc80ec7d4
MISC metadata.xml 600 SHA256 cc4ad19e1aceca9ca09dc11a373941f51b582b39320151e4e20e178f587d43aa SHA512 51f25b694ee6a22738a0a6622f360792a89b0c6df97ad17c243bc95274c1d10e629e4d3c882a99943ec2b6db96443a2da87288365aff761eddb246e187f0dbbb WHIRLPOOL 6e63202d599828641afeb98dc7fe8f719105c48446f2f0fea6499b8d9318aa545196808cd39362d0e7042d65fbc42db7ca974dd3e2afe2e1b1a89ccc9a71d819
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.22 (GNU/Linux)
+
+iEYEAREIAAYFAlLv2KUACgkQ1ycZbhPLE2DzJwCfXTtattWzjhWZqqeTZYVhQqBU
+4IsAn2LMFs6p9UpdTkeNpu2AvtHbrqNP
+=r/z1
+-----END PGP SIGNATURE-----
diff --git a/sci-libs/cholmod/cholmod-1.7.4.ebuild b/sci-libs/cholmod/cholmod-1.7.4.ebuild
deleted file mode 100644
index a88d996c5dce..000000000000
--- a/sci-libs/cholmod/cholmod-1.7.4.ebuild
+++ /dev/null
@@ -1,105 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/cholmod/cholmod-1.7.4.ebuild,v 1.8 2013/02/21 21:56:07 jlec Exp $
-
-EAPI=4
-
-AUTOTOOLS_AUTORECONF=yes
-
-inherit autotools-utils eutils toolchain-funcs
-
-MY_PN=CHOLMOD
-PPV=1.7.0
-
-DESCRIPTION="Sparse Cholesky factorization and update/downdate library"
-HOMEPAGE="http://www.cise.ufl.edu/research/sparse/cholmod/"
-SRC_URI="
- http://www.cise.ufl.edu/research/sparse/${PN}/${MY_PN}-${PV}.tar.gz
- mirror://gentoo/${PN}-${PPV}-autotools.patch.bz2"
-
-LICENSE="LGPL-2.1 GPL-2"
-SLOT="0"
-KEYWORDS="~alpha ~amd64 ~hppa ~ppc ~ppc64 ~sparc ~x86 ~amd64-fbsd ~x86-fbsd ~amd64-linux ~x86-linux ~x86-macos"
-IUSE="debug doc metis minimal static-libs +supernodal"
-
-RDEPEND="
- sci-libs/amd
- sci-libs/colamd
- metis? (
- sci-libs/camd
- sci-libs/ccolamd
- || ( sci-libs/metis sci-libs/parmetis ) )
- supernodal? ( virtual/lapack )"
-
-DEPEND="${RDEPEND}
- supernodal? ( virtual/pkgconfig )
- metis? ( virtual/pkgconfig )"
-
-DOCS=( README.txt Doc/ChangeLog )
-
-S="${WORKDIR}/${MY_PN}"
-
-src_prepare() {
- cd "${WORKDIR}"
- epatch "${WORKDIR}"/${PN}-${PPV}-autotools.patch
- cd "${S}"
- use debug && epatch "${FILESDIR}"/${P}-debug.patch
- # bug #399483 does not build with parmetis-3.2
- has_version "=sci-libs/parmetis-3.2*" && \
- epatch "${FILESDIR}"/${P}-parmetis32.patch
-
- # We need to take care of cholmod.h here as well depending on
- # the USE flags, otherwise the installed file will reference
- # headers that we may not have included.
- if use minimal; then
- sed -i '/^#define CHOLMOD_/{N;
- s:\(#define\) \(CHOLMOD_CONFIG_H\)\n:\1 \2\n\1 NMODIFY 1\n\1 NMATRIXOPS 1\n:}' \
- Include/cholmod_config.h
- fi
-
- if ! use supernodal; then
- sed -i '/^#define CHOLMOD_/{N;
- s:\(#define\) \(CHOLMOD_CONFIG_H\)\n:\1 \2\n\1 NSUPERNODAL 1\n:}' \
- Include/cholmod_config.h
- fi
-
- if ! use metis; then
- sed -i '/^#define CHOLMOD_/{N;
- s:\(#define\) \(CHOLMOD_CONFIG_H\)\n:\1 \2\n\1 NPARTITION 1\n:}' \
- Include/cholmod_config.h
- fi
- autotools-utils_src_prepare
-}
-
-src_configure() {
- local lapack_libs=no
- local blas_libs=no
- if use supernodal; then
- blas_libs=$($(tc-getPKG_CONFIG) --libs blas)
- lapack_libs=$($(tc-getPKG_CONFIG) --libs lapack)
- fi
- local myeconfargs+=(
- --with-blas="${blas_libs}"
- --with-lapack="${lapack_libs}"
- $(use_enable supernodal mod-supernodal)
- $(use_enable !minimal mod-modify)
- $(use_enable !minimal mod-matrixops)
- $(use_enable metis mod-partition)
- )
- autotools-utils_src_configure
-}
-
-src_test() {
- if ! use supernodal || ! use metis || use minimal; then
- ewarn "According to your useflags, some modules were not built on"
- ewarn "purpose. This can cause the tests included with Cholmod"
- ewarn "to fail. Rebuild with USE=\"supernodal metis -minimal\""
- ewarn "if you care."
- fi
- autotools-utils_src_test -C Demo test
-}
-
-src_install() {
- autotools-utils_src_install
- use doc && dodoc Doc/UserGuide.pdf
-}
diff --git a/sci-libs/cholmod/cholmod-2.0.1.ebuild b/sci-libs/cholmod/cholmod-2.0.1.ebuild
deleted file mode 100644
index f1ff6dd7389f..000000000000
--- a/sci-libs/cholmod/cholmod-2.0.1.ebuild
+++ /dev/null
@@ -1,62 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/cholmod/cholmod-2.0.1.ebuild,v 1.5 2013/04/10 06:06:12 jlec Exp $
-
-EAPI=4
-
-inherit autotools-utils multilib toolchain-funcs
-
-DESCRIPTION="Sparse Cholesky factorization and update/downdate library"
-HOMEPAGE="http://www.cise.ufl.edu/research/sparse/cholmod/"
-SRC_URI="http://dev.gentoo.org/~bicatali/distfiles/${P}.tar.gz"
-
-LICENSE="minimal? ( LGPL-2.1 ) !minimal? ( GPL-2 )"
-SLOT="0"
-KEYWORDS="~alpha ~amd64 ~hppa ~ppc ~ppc64 ~sparc ~x86 ~amd64-fbsd ~amd64-linux ~x86-fbsd ~x86-linux ~x86-macos"
-IUSE="cuda doc lapack metis minimal static-libs"
-
-RDEPEND="
- >=sci-libs/amd-2.3
- >=sci-libs/colamd-2.8
- cuda? ( x11-drivers/nvidia-drivers dev-util/nvidia-cuda-toolkit )
- lapack? ( virtual/lapack )
- metis? (
- >=sci-libs/camd-2.3
- >=sci-libs/ccolamd-2.8
- || ( sci-libs/metis sci-libs/parmetis ) )"
-
-DEPEND="${RDEPEND}
- virtual/pkgconfig
- doc? ( virtual/latex-base )"
-
-src_prepare() {
- # bug #399483 does not build with parmetis-3.2
- has_version "=sci-libs/parmetis-3.2*" && \
- epatch "${FILESDIR}"/${PN}-1.7.4-parmetis32.patch
-}
-
-src_configure() {
- local lapack_libs=no
- local blas_libs=no
- if use lapack; then
- blas_libs=$($(tc-getPKG_CONFIG) --libs blas)
- lapack_libs=$($(tc-getPKG_CONFIG) --libs lapack)
- fi
- local myeconfargs=(
- --with-blas="${blas_libs}"
- --with-lapack="${lapack_libs}"
- $(use_with doc)
- $(use_with !minimal modify)
- $(use_with !minimal matrixops)
- $(use_with metis partition)
- $(use_with lapack supernodal)
- )
- if use cuda; then
- myeconfargs+=(
- --with-cuda
- --with-cublas-libs="-L${EPREFIX}/opt/cuda/$(get_libdir) -lcublas"
- --with-cublas-cflags="-I${EPREFIX}/opt/cuda/include"
- )
- fi
- autotools-utils_src_configure
-}
diff --git a/sci-libs/cholmod/files/cholmod-1.7.4-debug.patch b/sci-libs/cholmod/files/cholmod-1.7.4-debug.patch
deleted file mode 100644
index bf434e24f267..000000000000
--- a/sci-libs/cholmod/files/cholmod-1.7.4-debug.patch
+++ /dev/null
@@ -1,17 +0,0 @@
- Include/cholmod_internal.h | 2 --
- 1 files changed, 0 insertions(+), 2 deletions(-)
-
-diff --git a/Include/cholmod_internal.h b/Include/cholmod_internal.h
-index 36f20a2..2cd6dd2 100644
---- a/Include/cholmod_internal.h
-+++ b/Include/cholmod_internal.h
-@@ -53,9 +53,7 @@
- #define NDEBUG
- #endif
-
--/* Uncomment this line to enable debugging. CHOLMOD will be very slow.
- #undef NDEBUG
-- */
-
- #ifdef MATLAB_MEX_FILE
- #include "mex.h"