diff options
| -rw-r--r-- | sci-biology/rebase/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/rebase/Manifest | 26 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-1508.ebuild | 46 |
3 files changed, 55 insertions, 24 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index fd67158a66bb..a8c501dfc529 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/rebase # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.168 2015/08/02 12:01:41 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.169 2015/08/02 13:40:34 jlec Exp $ + +*rebase-1508 (02 Aug 2015) + + 02 Aug 2015; Justin Lecher <jlec@gentoo.org> +rebase-1508.ebuild: + Version Bump 02 Aug 2015; Justin Lecher <jlec@gentoo.org> -rebase-1505.ebuild, -rebase-1506.ebuild: diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index 79ba49be5310..3867c9bd060e 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,26 +1,6 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA512 - DIST rebase-1507.tar.xz 68538212 SHA256 87880a3f8cd49f537abf0a3d3fe00dca928ab5299cfd436351a279051f358efe SHA512 9fcb61d0f53f227485ecdaa86709b3fb7c20d8a430c456d2c24f68154691028709358d8dc25d4be2662d368e3cdd13d15eb316342dfb0f1aa8447b3742b80375 WHIRLPOOL f8cfc127890e17529d557f69c20be7ad90cd9e01ff9e112d41bb8c88359f7310744977253e8f82c71301ef1ea449f2e4cee9189e3b552edc242ab1033dca0b5e +DIST rebase-1508.tar.xz 69944352 SHA256 579ef686b0efea32d88633f85411da9c1396572eec0d20bd163ca7bf615c7b04 SHA512 d5dc9eb704ce28ab7951ab2a8781de76dcbd7a4b6d6c6634abcd36766c8dce77b6d8a712789fe6293a6ddc66cd9103e17121b0ff52f0d3fbabfc5bf47c2f2100 WHIRLPOOL f082a3096cef636a61a176d3d3fe5b993bc83e3b332d134ebc20201d21f2f66e3400ffc5d561018c63fb3201c5fc0862126a32c17c5c96f118859b62a618d341 EBUILD rebase-1507.ebuild 1205 SHA256 c120108f356a46c2ffdf6b2f311fabb8f1f45ed1fddd6dab550b9896decf9c35 SHA512 12f683a3fbc2d124c6f05a0e8528cbcf149ff52a7523131db680d4a98afbcac071cb2ea7f75e45352c0552bcbf42c16f5f4641baa9284479d33ded30101b3c01 WHIRLPOOL 34328d8f78e7af5b093bd1e7cd14e2220903e3a68ca437efb44dd37b5dca1689dfc70933fca2005a531a723be66339ac1e20af2d9501fac7e1865e1cdce1f840 -MISC ChangeLog 20926 SHA256 d9d5eccba71d7f8b3763f773571230d20611a862fd8a09d082f792e8db8dd853 SHA512 02a6fc0538d5c8b85bd150ada3ccc948cca93e599417b1da1853cc2619a4afd3dbb8a90816c67681e4928ec3d0b5658e4fe4fd203be5464857dc213ade618fd4 WHIRLPOOL d090591e5e1ab183ad37422b6d5ccdea14adc9b4c4704898c8187c2f45aff22e1c6db668205ef87368cebf31c4f844fd877739636fda9865a54f2023e4875a35 +EBUILD rebase-1508.ebuild 1205 SHA256 9c4022f8f9b0953d06e7e6de569a4fed26bae086793a65e963422bab64c8e796 SHA512 be1ad667e1997cdbb7b741cc349a5399d091109b270648ed6950de6364ab722b7e64292f34e91d5d3d453ab49cba44d83271254ac33d09e33a95d1bdcda5628d WHIRLPOOL 481d1303ac1b104a7b4ca9c558bc08682e3f622eccef8c5d5843fdddfe4adb545ccc616711f3d962904fbe7b43503e6c2b01d8432c0cec64e8f00b29f08f6621 +MISC ChangeLog 21038 SHA256 76b6b5b1c438cac629449fe0eb5b1fb7c5636e7ea1f46e0be154296bcb5e9f9a SHA512 ead6c4c8dbbe398926e0f4f11d77486b77bd9c524641bb01f40d26f5910d6d8022c59d8d59e407883e48f074ece72ce5173f299ba550b44b1e018bb0b417630f WHIRLPOOL 4ae55b838d3eb6d2b7c00fb6afb8896e313e9b5c9ffe17ec8bcad1d078eb4146585831c1fa73d908a89816b9725cfa3e6593b472d0346755091368d5adb5afb5 MISC metadata.xml 813 SHA256 392179fd31cd6876ae2e2501faa8b0733704f03d0414c3668fee1f74a8462e56 SHA512 cfbd842c417a0384b17428cf36d866acbac2f89fa1496f45a908cf0d885879b2318fd21a173dc0a8ddae81c00d1c5a5646296473e199ced9028daeb004bea42a WHIRLPOOL 21c9d1a421d157ae6848a6fd99996566a3b51309e246a4aee531b0abab88698a5323d35a22430d9a21f5803402beac917f5cd295f23651f3889304bbeb65d015 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.1 - -iQJ8BAEBCgBmBQJVvgamXxSAAAAAAC4AKGlzc3Vlci1mcHJAbm90YXRpb25zLm9w -ZW5wZ3AuZmlmdGhob3JzZW1hbi5uZXQ0QUU0N0I4NzFERUI0MTJFN0EyODE0NUFF -OTQwMkE3OUIwMzUyOUEyAAoJEOlAKnmwNSmiw2EP/ieGTVNydhZQdHQwGbcEUadK -oyvkfnacHqSZwc0Hx6GKnCX4qxvO2WJam9PjEL2apNAdSiA6tj+Hoy9UO0vFyw8c -fS9uSOSZHBUOmAmY0C+bfEI0koFgNclf3jJifNU04aqcG4QtdKlIqTSi1zvBzZ4C -EdplIX40Z+b9YBmWqmQGESerFdDxnXaNgYCWIHflibedcA+GLGNBt7ncmUEQe3Sd -rWkScrlbw8crJvlaEVQYrd04XJfYPi2hn+vyF9jGJK7Z+c9ELQ3Zw62a6XOcfYV8 -TjbTu/Zg33d+a7QMsEkv7mTG2kEazognVVdRaBhcQHBvlDyDGWA2ZwFJQc24aSYt -aMB4G8PmFpvgHGfaF6RDNQz7kGwXkrjUdoo8vHi9zNXZ0AE9cK9OtWJtEXP61lMW -BDx/oPQEUSLZ77DujmdkToIvcaAsss28VKdzmw433QIjtI9eDEkg/YYX2rN0+o89 -Vqo4L3ZejG45uNviodLKLNi6gZOJpzmWgVkEOeDRfHaoUQeim4iRCt4AqOAoi2Ft -uoGVIsK4XnJ1ewac10o7S6eZw5ZPfakHgNJkjStFlYnMAqmEKb6JzMUc4OR4+2Of -k7RiL5F+FAYRG4Ih9hOGZ6Tm6sR7JyIr6Xqxm1x4lbQVs94CbDAS5H+yRlbA4b9+ -Us0U48280Z+AWwHfO/sU -=u9Db ------END PGP SIGNATURE----- diff --git a/sci-biology/rebase/rebase-1508.ebuild b/sci-biology/rebase/rebase-1508.ebuild new file mode 100644 index 000000000000..a73bd4a86008 --- /dev/null +++ b/sci-biology/rebase/rebase-1508.ebuild @@ -0,0 +1,46 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1508.ebuild,v 1.1 2015/08/02 13:40:34 jlec Exp $ + +EAPI=5 + +MY_PV=${PV#1} + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +SLOT="0" +LICENSE="public-domain" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" +IUSE="emboss minimal" + +RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" +DEPEND="${RDEPEND}" + +RESTRICT="binchecks strip" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE || die + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} |