blob: 8348dc6b59f2e6f94cd990169bced10564eff0d9 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
|
# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
CMAKE_IN_SOURCE_BUILD=1
CMAKE_MAKEFILE_GENERATOR="emake"
COMMIT="54c6ebe03a07d7c32db46a6a06a03e8b821da4f2"
EGO_PN="mlpack.org/v1/mlpack"
EGO_SUM=(
"github.com/ajstarks/svgo v0.0.0-20180226025133-644b8db467af/go.mod"
"github.com/fogleman/gg v1.2.1-0.20190220221249-0403632d5b90/go.mod"
"github.com/golang/freetype v0.0.0-20170609003504-e2365dfdc4a0/go.mod"
"github.com/jung-kurt/gofpdf v1.0.3-0.20190309125859-24315acbbda5/go.mod"
"golang.org/x/exp v0.0.0-20180321215751-8460e604b9de/go.mod"
"golang.org/x/exp v0.0.0-20180807140117-3d87b88a115f/go.mod"
"golang.org/x/exp v0.0.0-20190125153040-c74c464bbbf2"
"golang.org/x/exp v0.0.0-20190125153040-c74c464bbbf2/go.mod"
"golang.org/x/image v0.0.0-20180708004352-c73c2afc3b81/go.mod"
"golang.org/x/tools v0.0.0-20180525024113-a5b4c53f6e8b/go.mod"
"golang.org/x/tools v0.0.0-20190206041539-40960b6deb8e/go.mod"
"gonum.org/v1/gonum v0.0.0-20180816165407-929014505bf4/go.mod"
"gonum.org/v1/gonum v0.7.0"
"gonum.org/v1/gonum v0.7.0/go.mod"
"gonum.org/v1/netlib v0.0.0-20190313105609-8cb42192e0e0"
"gonum.org/v1/netlib v0.0.0-20190313105609-8cb42192e0e0/go.mod"
"gonum.org/v1/plot v0.0.0-20190515093506-e2840ee46a6b/go.mod"
"rsc.io/pdf v0.1.1/go.mod"
)
GO_OPTIONAL=1
PYTHON_COMPAT=( python3_10 )
inherit cmake flag-o-matic go-module python-single-r1
go-module_set_globals
DESCRIPTION="scalable C++ machine learning library"
HOMEPAGE="
https://www.mlpack.org
https://github.com/mlpack/mlpack
"
SRC_URI="
https://github.com/mlpack/mlpack/archive/${COMMIT}.tar.gz -> ${PF}.tar.gz
go? ( ${EGO_SUM_SRC_URI} )
"
S="${WORKDIR}/${PN}-${COMMIT}"
LICENSE="LGPL-3 BSD"
SLOT="0"
KEYWORDS="~amd64"
IUSE="debug doc go julia openmp profile R source test"
CDEPEND="
${PYTHON_DEPS}
go? ( >=dev-lang/go-1.11.0 )
julia? ( || ( >=dev-lang/julia-1.3.0 >=dev-lang/julia-bin-1.3.0:* ) )
R? ( >=dev-lang/R-4.0 )
"
RDEPEND="
${CDEPEND}
R? (
dev-R/BH
>=dev-R/Rcpp-0.12.12
dev-R/RcppArmadillo
dev-R/RcppEnsmallen
dev-R/roxygen2
>=dev-R/testthat-2.1.0
)
$(python_gen_cond_dep '
>=dev-libs/boost-1.58[python,${PYTHON_USEDEP}]
dev-libs/libxml2[${PYTHON_USEDEP}]
>=dev-python/cython-0.24[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/pandas[${PYTHON_USEDEP}]
dev-python/wheel[${PYTHON_USEDEP}]
')
>=dev-libs/cereal-1.1.2
dev-libs/stb
>=sci-libs/armadillo-8.4.0[arpack,blas,lapack]
>=sci-libs/ensmallen-2.10.0
"
DEPEND="
${RDEPEND}
R? ( dev-R/pkgbuild )
test? ( dev-cpp/catch:0 )
"
BDEPEND="
app-arch/unzip
app-text/txt2man
virtual/pkgconfig
doc? (
app-doc/doxygen
dev-libs/mathjax
)
test? ( $(python_gen_cond_dep 'dev-python/pytest[${PYTHON_USEDEP}]') )
"
PATCHES=(
"${FILESDIR}/${PN}-no-pytest-runner.patch"
"${FILESDIR}/${PN}-link-armadillo.patch"
"${FILESDIR}/${PN}-3.4.2_p20220501-no-backports.patch"
"${FILESDIR}/${PN}-3.4.2_p20220501-system-catch.patch"
)
RESTRICT="!test? ( test )"
REQUIRED_USE="${PYTHON_REQUIRED_USE}"
src_unpack() {
go-module_src_unpack
use go && go-module_setup_proxy
}
src_prepare() {
rm src/mlpack/tests/catch.hpp || die
rm -r src/mlpack/core/std_backport || die
rm -r src/mlpack/core/cereal/{pair_associative_container,unordered_map}.hpp || die
sed -i \
-e "s:share/doc/mlpack:share/doc/${PF}:" \
-e 's/-O3//g' \
CMakeLists.txt || die
cmake_src_prepare
}
src_configure() {
use R && append-cxxflags "-larmadillo"
append-cxxflags "-I/usr/include/catch2"
local mycmakeargs=(
-DBUILD_CLI_EXECUTABLES=ON
-DBUILD_PYTHON_BINDINGS=ON
-DBUILD_SHARED_LIBS=ON
-DDOWNLOAD_DEPENDENCIES=OFF
-DARMADILLO_INCLUDE_DIR="${EPREFIX}/usr/include"
-DARMADILLO_LIBRARY="${EPREFIX}/usr/$(get_libdir)/libarmadillo.so"
-DCEREAL_INCLUDE_DIR="${EPREFIX}/usr/include"
-DENSMALLEN_INCLUDE_DIR="${EPREFIX}/usr/include"
-DSTB_IMAGE_INCLUDE_DIR="${EPREFIX}/usr/include/stb"
-DARMA_EXTRA_DEBUG=$(usex debug)
-DBUILD_DOCS=$(usex doc)
-DBUILD_GO_BINDINGS=OFF
-DFORCE_BUILD_GO_BINDINGS=$(usex go)
-DBUILD_GO_SHLIB=$(usex go)
-DBUILD_JULIA_BINDINGS=$(usex julia)
-DBUILD_MARKDOWN_BINDINGS=$(usex doc)
-DBUILD_R_BINDINGS=$(usex R)
-DBUILD_TESTS=$(usex test)
-DDEBUG=$(usex debug)
-DMATHJAX=$(usex doc)
-DPROFILE=$(usex profile)
-DTEST_VERBOSE=$(usex test)
-DUSE_OPENMP=$(usex openmp)
)
cmake_src_configure
}
src_compile() {
cmake_src_compile
use test && cmake_src_compile mlpack_test
}
src_install() {
cmake_src_install
if use R; then
pushd "${BUILD_DIR}/src/mlpack/bindings/R/" || die
insinto "/usr/$(get_libdir)/R/site-library"
rm -r mlpack/src || die
doins -r mlpack
popd || die
fi
if use source; then
gosrc="$(go env GOROOT)/src" || die
insinto "${gosrc}/${EGO_PN}"
doins -r src/mlpack/bindings/go/mlpack/*
fi
python_optimize
}
|
GitWeb